| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498345
Identifier: 34498345
GI number: 34498345
Start: 3165436
End: 3166263
Strand: Reverse
Name: 34498345
Synonym: CV_2890
Alternate gene names: NA
Gene position: 3166263-3165436 (Counterclockwise)
Preceding gene: 34498346
Following gene: 34498343
Centisome position: 66.64
GC content: 68.96
Gene sequence:
>828_bases ATGGAATACGCCGTGCAACGCTACGCAGCCACCCGGCCCTGGGCCAAGCGAGTGGGGCAGCTGTATGTCCAGACGGTTCA GGCCGCCGAGGCCCGGGCGCAGATGAAGGACGTGATCAAGCGCGAACTGGAGCGGGCGGCGCAGGTGTTCGAGATTCCCC AGGCCACGATCGTCTGCGAACTGGCGCTGGCCGAGGCCTGGGGGCACTTCGTGCGCCATGGGCGTGTGGTTTCCCATCTG GACGCTGCGCTGGCGTCGGCGCTGGCCCACACCCGCCAGCCGTCCAATTTGCCCGATACGCTGAGTCTGCCGGCCGCCGC GTTTTTCCTGCATGTGCCGGGCGAAGGCGGCGCTTTCGTCGTGCATCAGCCCGAACGCCGCGCCCTGCTGTTGACGATGG TGCGCATGGGCTTCGCGCCGAATGGCGTCAACTGGCTGCAGGCGGCCGACCAGGTGGAGCTGGCCCGGGTCGAATATCCG GGCGAGCTGGCGCCGCAGCTGGAGGCCGTGCCGGACGAATGGCGGGCGCTGCTGTCTTCCGTGCTGAACGGGCTGGCGAT GATGACCCAGCCCAAGCTCGAGCTGTCCAAGGGCTGGGAGGCTTCCGCTCCGGCCGGATGGGTGGCCGATGCCGCGCATC CGTCGTGCGTCAAGACCCGGCAGAAGGCGCGCAGCCAACTGCTGAAATCGGGTTTCGGCGAAGTGACGTTCTGCCGGGTG GCGGAGCTGGCCGACGGCGCCGAATACGCCAGCCAGGGCTATTGGCGCCGCCAGTCTTTCGGCGCCGACAAGGCGCACTC GCGCCTGGTGTGGGTGGCGCCGCGCTGA
Upstream 100 bases:
>100_bases CACTCAGCAAACGTCAACAGCCCCTAGATCCGGACGGGTTGGGACATAGGGCCGCGTTTGCTACAATGCGGCCCTTTTTC ATTTTGAGGGAAGCAGTGGA
Downstream 100 bases:
>100_bases CCGCCGGCGACCCGGCCCAAGCGCCATGGCGCGGGTCGAGAGCTCCGATGTGAAAAAAACGCCCGGCTTGCCGGGCGTTT TTCCATGCGCGCGGCTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MEYAVQRYAATRPWAKRVGQLYVQTVQAAEARAQMKDVIKRELERAAQVFEIPQATIVCELALAEAWGHFVRHGRVVSHL DAALASALAHTRQPSNLPDTLSLPAAAFFLHVPGEGGAFVVHQPERRALLLTMVRMGFAPNGVNWLQAADQVELARVEYP GELAPQLEAVPDEWRALLSSVLNGLAMMTQPKLELSKGWEASAPAGWVADAAHPSCVKTRQKARSQLLKSGFGEVTFCRV AELADGAEYASQGYWRRQSFGADKAHSRLVWVAPR
Sequences:
>Translated_275_residues MEYAVQRYAATRPWAKRVGQLYVQTVQAAEARAQMKDVIKRELERAAQVFEIPQATIVCELALAEAWGHFVRHGRVVSHL DAALASALAHTRQPSNLPDTLSLPAAAFFLHVPGEGGAFVVHQPERRALLLTMVRMGFAPNGVNWLQAADQVELARVEYP GELAPQLEAVPDEWRALLSSVLNGLAMMTQPKLELSKGWEASAPAGWVADAAHPSCVKTRQKARSQLLKSGFGEVTFCRV AELADGAEYASQGYWRRQSFGADKAHSRLVWVAPR >Mature_275_residues MEYAVQRYAATRPWAKRVGQLYVQTVQAAEARAQMKDVIKRELERAAQVFEIPQATIVCELALAEAWGHFVRHGRVVSHL DAALASALAHTRQPSNLPDTLSLPAAAFFLHVPGEGGAFVVHQPERRALLLTMVRMGFAPNGVNWLQAADQVELARVEYP GELAPQLEAVPDEWRALLSSVLNGLAMMTQPKLELSKGWEASAPAGWVADAAHPSCVKTRQKARSQLLKSGFGEVTFCRV AELADGAEYASQGYWRRQSFGADKAHSRLVWVAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30259; Mature: 30259
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYAVQRYAATRPWAKRVGQLYVQTVQAAEARAQMKDVIKRELERAAQVFEIPQATIVCE CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LALAEAWGHFVRHGRVVSHLDAALASALAHTRQPSNLPDTLSLPAAAFFLHVPGEGGAFV HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEECCCCCEEE VHQPERRALLLTMVRMGFAPNGVNWLQAADQVELARVEYPGELAPQLEAVPDEWRALLSS EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH VLNGLAMMTQPKLELSKGWEASAPAGWVADAAHPSCVKTRQKARSQLLKSGFGEVTFCRV HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH AELADGAEYASQGYWRRQSFGADKAHSRLVWVAPR HHHHCHHHHHHCCCHHHHHCCCCHHHCCEEEEECC >Mature Secondary Structure MEYAVQRYAATRPWAKRVGQLYVQTVQAAEARAQMKDVIKRELERAAQVFEIPQATIVCE CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LALAEAWGHFVRHGRVVSHLDAALASALAHTRQPSNLPDTLSLPAAAFFLHVPGEGGAFV HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEECCCCCEEE VHQPERRALLLTMVRMGFAPNGVNWLQAADQVELARVEYPGELAPQLEAVPDEWRALLSS EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHH VLNGLAMMTQPKLELSKGWEASAPAGWVADAAHPSCVKTRQKARSQLLKSGFGEVTFCRV HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH AELADGAEYASQGYWRRQSFGADKAHSRLVWVAPR HHHHCHHHHHHCCCHHHHHCCCCHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA