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The map label for this gene is flgF1 [H]

Identifier: 34498339

GI number: 34498339

Start: 3160661

End: 3161401

Strand: Reverse

Name: flgF1 [H]

Synonym: CV_2884

Alternate gene names: 34498339

Gene position: 3161401-3160661 (Counterclockwise)

Preceding gene: 34498340

Following gene: 34498338

Centisome position: 66.54

GC content: 64.1

Gene sequence:

>741_bases
ATGGACCGCGTGCTGTTTTTGGCGATGACCGGCGCCAAGCATGAAGCTTGGCAGCAAGCGACCACCGCCAACAATTTGGC
CAACGTCAACACCAACGCCTTCAAGGCGGATCTGGCGGCCTACCGGGCCTTGCCGGTGGTGGGCGACGGCGCCCCGACCC
GCACTTACGTGGTGGACAACACCATCGGTTTCGATGCCAGCCAGGGCAGCTTGCAGCATACCGGCAATCCGAGCGATTTC
GCGCTGGGCACGCCGGGCTTCTTCGCGGTGCAGGGGGCGGACGGCCAGGAGGCCTACACCCGCGACGGCGGCTATGTGCT
GGATGCCACTGGCCTGATGCGCACGCATTCCGGATTGCTGATCATGGGCGACGGCGGCCCGATCACGGTGCCGGCGGGAA
GCCAGGTGCAGCTGGGCAGCGACGGCTCCGTGATGGCGGTGCCGCAGTCCGGCGCCAACCGCGCGCCGCAGCTGGTGGGC
CAGATCAAGATGGTCAATCCCGGTCCCAAGGATGTATACAAGGGCGAGGACAAACTGTTCCACGTCAACGGCGGCGGCAC
GCTGCCGGCCAGCGCCGATGTGAAGCTGGTGCCGGAAACGCTGGAATCGTCCAATGTCAACTCGGTGGAGGCGCTGGTCC
AGATGATCTCGCACGGCCGACAGTACGAATTGAATATCAAGATGATGCAGACCTCGCAGCAAAACGATCAGCAGGCTGCG
CAGTTGCTGTCCATGAGCTGA

Upstream 100 bases:

>100_bases
CACTGCCCAGCGCTACTACCAGGCCAACGCGCAGACGATCAAGACCCAGGACACGTTGATCCAGACGTTGTTGAACATCT
AAACAGGGCTGAGCTGAATA

Downstream 100 bases:

>100_bases
CGGCATAGCGGAAAGAAAGCAGGGTAATACGCCATGATGCGCGCACTGTATATCGCCAAGACCGGCATGGATACCAGCCA
GTTCCAGCTGGACGTGGTTT

Product: flagellar basal-body rod protein flgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRALPVVGDGAPTRTYVVDNTIGFDASQGSLQHTGNPSDF
ALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSGLLIMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVG
QIKMVNPGPKDVYKGEDKLFHVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAA
QLLSMS

Sequences:

>Translated_246_residues
MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRALPVVGDGAPTRTYVVDNTIGFDASQGSLQHTGNPSDF
ALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSGLLIMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVG
QIKMVNPGPKDVYKGEDKLFHVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAA
QLLSMS
>Mature_246_residues
MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRALPVVGDGAPTRTYVVDNTIGFDASQGSLQHTGNPSDF
ALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSGLLIMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVG
QIKMVNPGPKDVYKGEDKLFHVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAA
QLLSMS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=254, Percent_Identity=40.1574803149606, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI1787318, Length=267, Percent_Identity=32.9588014981273, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25822; Mature: 25822

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRALPVVGDGAPTRTYVVDN
CCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEEEEEC
TIGFDASQGSLQHTGNPSDFALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSGLL
CCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCEECCCCEEEECCCCEEECCCEE
IMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVGQIKMVNPGPKDVYKGEDKLF
EEECCCEEEECCCCEEEECCCCCEEEECCCCCCCCCHHHEEEEEECCCCHHHCCCCCEEE
HVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAA
EECCCCCCCCCCCEEEECHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHH
QLLSMS
HHHCCC
>Mature Secondary Structure
MDRVLFLAMTGAKHEAWQQATTANNLANVNTNAFKADLAAYRALPVVGDGAPTRTYVVDN
CCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEEEEEC
TIGFDASQGSLQHTGNPSDFALGTPGFFAVQGADGQEAYTRDGGYVLDATGLMRTHSGLL
CCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCEECCCCEEEECCCCEEECCCEE
IMGDGGPITVPAGSQVQLGSDGSVMAVPQSGANRAPQLVGQIKMVNPGPKDVYKGEDKLF
EEECCCEEEECCCCEEEECCCCCEEEECCCCCCCCCHHHEEEEEECCCCHHHCCCCCEEE
HVNGGGTLPASADVKLVPETLESSNVNSVEALVQMISHGRQYELNIKMMQTSQQNDQQAA
EECCCCCCCCCCCEEEECHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHH
QLLSMS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]