| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is flgG1 [H]
Identifier: 34498338
GI number: 34498338
Start: 3159845
End: 3160627
Strand: Reverse
Name: flgG1 [H]
Synonym: CV_2883
Alternate gene names: 34498338
Gene position: 3160627-3159845 (Counterclockwise)
Preceding gene: 34498339
Following gene: 34498337
Centisome position: 66.52
GC content: 61.69
Gene sequence:
>783_bases ATGATGCGCGCACTGTATATCGCCAAGACCGGCATGGATACCAGCCAGTTCCAGCTGGACGTGGTTTCCAACAACCTGGC GAACGTCAACACCGTGGGTTTCAAGAAAAGCCGCGGCATATTCGAAGACCTCTACTACCAGACGCTGAGGCAGCCTGGCG GGCAGCTGGCGAACGGCAACGCCAATCCCACCGGCCTGCAGGTCGGTACCGGCGCGGCCGCGGTGGCGTCCTCTCGCATC TTCACCCAGGGGCCCCCGCAGCAGACTGGGCAGCCGCTGGACCTGCAGATCCAGGGCGACGGTTTCTTCAGGCTGCTGCA GCCGGATGGCACCACCGCTTACAGCCGCAACGGCCAGTTCCAGCGCGACGCCAACGGCAATGTCGTGAATCCGGATGGCC TGCCGTTGAACCCGAACATCAATATTCCGGCCACTGCCCAGCAGATCACGGTTTCGTCCGCCGGCGTCGTCCAATACACC CTGGCGGGCAGCGCGGCGCCGCAGACCGCGGGCACCATTCTGCTGACGACCTTCATCAACCCGCAGGGCTTGCAGAGCAT AGGCAACAACCTCTACCTACAAACCGCGGCCTCGGGCGATCCGCAGGATGGCAATCCTCAAACCGATGATCGCGGCGCGA TTAAATCCGGTTTTCTGGAGTCGTCCAACGTCAATGTGACCGAGGAGCTGGTGAACATGATCACCGCGCAGCGTTCGTTT GAAATGAACTCCCGCGCCGTGACCACCGCGGACCAGATGCTGCAGAAGCTGAGCAATTTGTAA
Upstream 100 bases:
>100_bases TATCAAGATGATGCAGACCTCGCAGCAAAACGATCAGCAGGCTGCGCAGTTGCTGTCCATGAGCTGACGGCATAGCGGAA AGAAAGCAGGGTAATACGCC
Downstream 100 bases:
>100_bases TATCGCGAGGCGGTGCGGAGCCGCCTTGACGGGAGCATGGCAATGAAAAGCAAACTGGCGATCACGATGGTGTCGGCGCT CCTGCTGGCGGCTTGCGCGG
Product: flagellar basal-body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGNANPTGLQVGTGAAAVASSRI FTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQFQRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYT LAGSAAPQTAGTILLTTFINPQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF EMNSRAVTTADQMLQKLSNL
Sequences:
>Translated_260_residues MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGNANPTGLQVGTGAAAVASSRI FTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQFQRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYT LAGSAAPQTAGTILLTTFINPQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF EMNSRAVTTADQMLQKLSNL >Mature_260_residues MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGNANPTGLQVGTGAAAVASSRI FTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQFQRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYT LAGSAAPQTAGTILLTTFINPQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF EMNSRAVTTADQMLQKLSNL
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=51.5384615384615, Blast_Score=270, Evalue=8e-74, Organism=Escherichia coli, GI1787316, Length=143, Percent_Identity=37.0629370629371, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787317, Length=256, Percent_Identity=26.5625, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27600; Mature: 27600
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGN CCEEEEEEECCCCHHHEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC ANPTGLQVGTGAAAVASSRIFTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQF CCCCCEEECCCHHHHHHCCCCCCCCCHHCCCCEEEEECCCCEEEEECCCCCEEECCCCCE QRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYTLAGSAAPQTAGTILLTTFIN EECCCCCEECCCCCCCCCCCCCCCCHHEEEECCCCEEEEEECCCCCCCCCCEEEEEEECC PQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHC EMNSRAVTTADQMLQKLSNL CCCCCEEHHHHHHHHHHHCC >Mature Secondary Structure MMRALYIAKTGMDTSQFQLDVVSNNLANVNTVGFKKSRGIFEDLYYQTLRQPGGQLANGN CCEEEEEEECCCCHHHEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC ANPTGLQVGTGAAAVASSRIFTQGPPQQTGQPLDLQIQGDGFFRLLQPDGTTAYSRNGQF CCCCCEEECCCHHHHHHCCCCCCCCCHHCCCCEEEEECCCCEEEEECCCCCEEECCCCCE QRDANGNVVNPDGLPLNPNINIPATAQQITVSSAGVVQYTLAGSAAPQTAGTILLTTFIN EECCCCCEECCCCCCCCCCCCCCCCHHEEEECCCCEEEEEECCCCCCCCCCEEEEEEECC PQGLQSIGNNLYLQTAASGDPQDGNPQTDDRGAIKSGFLESSNVNVTEELVNMITAQRSF CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHC EMNSRAVTTADQMLQKLSNL CCCCCEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]