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The map label for this gene is flgH1

Identifier: 34498337

GI number: 34498337

Start: 3159119

End: 3159802

Strand: Reverse

Name: flgH1

Synonym: CV_2882

Alternate gene names: 34498337

Gene position: 3159802-3159119 (Counterclockwise)

Preceding gene: 34498338

Following gene: 34498336

Centisome position: 66.51

GC content: 64.47

Gene sequence:

>684_bases
ATGAAAAGCAAACTGGCGATCACGATGGTGTCGGCGCTCCTGCTGGCGGCTTGCGCGGTGCAGGAGCCGCCGCTGGTGCA
GGGGCCGACCACGGCGAAGCCCCAGCCGCGGCCGGTGGGGCTGCCGGCCAATGGCGCCATCTTCCAGGCGGCGAGCTACC
GACCGATGTTCCAGGATGCGATGCCCATCCAGGTGGGGGATACGCTGCAGATCACCATCCAGGAGAATTCCTCCACTTCG
CAGTCCGAGCAGGTGACCGATACCCGCACCTCCGGCCTGAGCTCCAACATCACCGCGGGCGTGAAGATCCCCTTCCTACC
CAGCGGGCTGGCCAGCGGCCTCGGCGGCACCAGCTTCAACAGCTCCGGCTCCGCCAATAACACCGGCAAGGGCAATAACC
AGGTCGCCACCACTTTCGTCAGCTCCATCACCGTGACGGTGACCGATGTGCTGGCCAACGGCAATCTGGTGGTCAGCGGC
GAGAAAATGGTGCGCATCAACAGCGACACCGAGTCGATCCGCCTCTCCGGCGTGGTCAATCCCCGCGACGTGACGCCGGA
TCGGACCGTGTCGTCGCTGAAGGTGGCCGATGCGCGCATCGAGCAGCAGACCAAGGGCAACAACCGTCTGTACAACGAGC
CTGGCTGGTTGTCCAAGATCTTCATGTCGCTGCTGCCGATCTGA

Upstream 100 bases:

>100_bases
GAACTCCCGCGCCGTGACCACCGCGGACCAGATGCTGCAGAAGCTGAGCAATTTGTAATATCGCGAGGCGGTGCGGAGCC
GCCTTGACGGGAGCATGGCA

Downstream 100 bases:

>100_bases
CGGCGGCGGCGGGAGTCGTTTGATGAAAAAATGGATCGTGATGGCCAGCCTGCTGCTGGCCGCGCTGCCGGCGATGTCCG
CCCAGCGTTTGAAGGATATC

Product: flagellar L-ring protein precursor flgH

Products: NA

Alternate protein names: Basal body L-ring protein 2

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKSKLAITMVSALLLAACAVQEPPLVQGPTTAKPQPRPVGLPANGAIFQAASYRPMFQDAMPIQVGDTLQITIQENSSTS
QSEQVTDTRTSGLSSNITAGVKIPFLPSGLASGLGGTSFNSSGSANNTGKGNNQVATTFVSSITVTVTDVLANGNLVVSG
EKMVRINSDTESIRLSGVVNPRDVTPDRTVSSLKVADARIEQQTKGNNRLYNEPGWLSKIFMSLLPI

Sequences:

>Translated_227_residues
MKSKLAITMVSALLLAACAVQEPPLVQGPTTAKPQPRPVGLPANGAIFQAASYRPMFQDAMPIQVGDTLQITIQENSSTS
QSEQVTDTRTSGLSSNITAGVKIPFLPSGLASGLGGTSFNSSGSANNTGKGNNQVATTFVSSITVTVTDVLANGNLVVSG
EKMVRINSDTESIRLSGVVNPRDVTPDRTVSSLKVADARIEQQTKGNNRLYNEPGWLSKIFMSLLPI
>Mature_227_residues
MKSKLAITMVSALLLAACAVQEPPLVQGPTTAKPQPRPVGLPANGAIFQAASYRPMFQDAMPIQVGDTLQITIQENSSTS
QSEQVTDTRTSGLSSNITAGVKIPFLPSGLASGLGGTSFNSSGSANNTGKGNNQVATTFVSSITVTVTDVLANGNLVVSG
EKMVRINSDTESIRLSGVVNPRDVTPDRTVSSLKVADARIEQQTKGNNRLYNEPGWLSKIFMSLLPI

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=231, Percent_Identity=41.1255411255411, Blast_Score=140, Evalue=7e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH2_CHRVO (Q7NU21)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_902552.1
- GeneID:   2548166
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_2882
- NMPDR:   fig|243365.1.peg.2882
- HOGENOM:   HBG507455
- OMA:   ARIVDIR
- PhylomeDB:   Q7NU21
- ProtClustDB:   CLSK2485523
- BioCyc:   CVIO243365:CV_2882-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 23819; Mature: 23819

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKLAITMVSALLLAACAVQEPPLVQGPTTAKPQPRPVGLPANGAIFQAASYRPMFQDA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCC
MPIQVGDTLQITIQENSSTSQSEQVTDTRTSGLSSNITAGVKIPFLPSGLASGLGGTSFN
CCEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHCCCCCCCC
SSGSANNTGKGNNQVATTFVSSITVTVTDVLANGNLVVSGEKMVRINSDTESIRLSGVVN
CCCCCCCCCCCCCCEEEEEHHHHEEEEEEEECCCCEEEECCEEEEECCCCCEEEEEECCC
PRDVTPDRTVSSLKVADARIEQQTKGNNRLYNEPGWLSKIFMSLLPI
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKSKLAITMVSALLLAACAVQEPPLVQGPTTAKPQPRPVGLPANGAIFQAASYRPMFQDA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCC
MPIQVGDTLQITIQENSSTSQSEQVTDTRTSGLSSNITAGVKIPFLPSGLASGLGGTSFN
CCEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHCCCCCCCC
SSGSANNTGKGNNQVATTFVSSITVTVTDVLANGNLVVSGEKMVRINSDTESIRLSGVVN
CCCCCCCCCCCCCCEEEEEHHHHEEEEEEEECCCCEEEECCEEEEECCCCCEEEEEECCC
PRDVTPDRTVSSLKVADARIEQQTKGNNRLYNEPGWLSKIFMSLLPI
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782