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The map label for this gene is slyA [C]

Identifier: 34498299

GI number: 34498299

Start: 3099733

End: 3100221

Strand: Direct

Name: slyA [C]

Synonym: CV_2844

Alternate gene names: 34498299

Gene position: 3099733-3100221 (Clockwise)

Preceding gene: 34498296

Following gene: 34498300

Centisome position: 65.24

GC content: 66.87

Gene sequence:

>489_bases
ATGGAAGACATCGATCTATTACGCCTGAGACTGACCAGCAGCCTGCGCCCGATGGGCGTGCTGTGGCGGCATATCGCGCA
GGAAGCGCTGACGGTTCACGGCATTTCGGTATCCGGCGGCTCCGCGCTGCTGTTCATCGGCCGGCTGGGCGAAGGCGTCA
GCCACAGCGCGCTGGCCGAAGAGCTGGGCATGGAGCCCGCCTCCCTGGTTCGCATCGTAGACCAGCTGAGCCAGGCTGGC
CTGTTGCGGCGGGAACAAGGCCTGCATGACCGCCGGGTGAAAACGCTGTGGTTCACCGACGCCGGCCGCGAGCTCAGCCG
CAAGATAGAAACGGAGCTGGTCGCGTTGCGCTCGCGCGTGCTGGCGCCGCTCAGCAAGGCCGATCTGGAAGCGGCGCTGC
GGGTATTCCACGTGCTGGAGCAGGCCGCGCAAACCCGGCCGCCCAACGACCCCATGCTGGACAAACGCCATGATCGCGCT
GCCCGCTAG

Upstream 100 bases:

>100_bases
GTCGGCCTGTCAATTAGTTAGTTTGCTAATTAATAAAATTGCCGCTACAATCCGTTTACACCATCACTATCCTCATCAGG
CCTACCGGCCGGCAAACACC

Downstream 100 bases:

>100_bases
ACGCGACTGGCTGTTCTCGGCTCGCACCTTCGCCGCCGCGATGCTGGCGCTGTACATCGCGCTGGCGCTGGGCCTGCCTC
GCCCGAGCTGGGCGATGGGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Regulatory Protein MarR; MarR Family Regulatory Protein; Transcriptional Regulator Marr Family; Transcriptional Regulator For Cryptic Hemolysin; MarR-Family Transcriptional Regulator; Transcriptional Regulator SlyA; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MEDIDLLRLRLTSSLRPMGVLWRHIAQEALTVHGISVSGGSALLFIGRLGEGVSHSALAEELGMEPASLVRIVDQLSQAG
LLRREQGLHDRRVKTLWFTDAGRELSRKIETELVALRSRVLAPLSKADLEAALRVFHVLEQAAQTRPPNDPMLDKRHDRA
AR

Sequences:

>Translated_162_residues
MEDIDLLRLRLTSSLRPMGVLWRHIAQEALTVHGISVSGGSALLFIGRLGEGVSHSALAEELGMEPASLVRIVDQLSQAG
LLRREQGLHDRRVKTLWFTDAGRELSRKIETELVALRSRVLAPLSKADLEAALRVFHVLEQAAQTRPPNDPMLDKRHDRA
AR
>Mature_162_residues
MEDIDLLRLRLTSSLRPMGVLWRHIAQEALTVHGISVSGGSALLFIGRLGEGVSHSALAEELGMEPASLVRIVDQLSQAG
LLRREQGLHDRRVKTLWFTDAGRELSRKIETELVALRSRVLAPLSKADLEAALRVFHVLEQAAQTRPPNDPMLDKRHDRA
AR

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18023; Mature: 18023

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDIDLLRLRLTSSLRPMGVLWRHIAQEALTVHGISVSGGSALLFIGRLGEGVSHSALAE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEHHCCCCCHHHHHH
ELGMEPASLVRIVDQLSQAGLLRREQGLHDRRVKTLWFTDAGRELSRKIETELVALRSRV
HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH
LAPLSKADLEAALRVFHVLEQAAQTRPPNDPMLDKRHDRAAR
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEDIDLLRLRLTSSLRPMGVLWRHIAQEALTVHGISVSGGSALLFIGRLGEGVSHSALAE
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEHHCCCCCHHHHHH
ELGMEPASLVRIVDQLSQAGLLRREQGLHDRRVKTLWFTDAGRELSRKIETELVALRSRV
HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHH
LAPLSKADLEAALRVFHVLEQAAQTRPPNDPMLDKRHDRAAR
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA