| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498250
Identifier: 34498250
GI number: 34498250
Start: 3028234
End: 3028650
Strand: Direct
Name: 34498250
Synonym: CV_2795
Alternate gene names: NA
Gene position: 3028234-3028650 (Clockwise)
Preceding gene: 34498249
Following gene: 34498251
Centisome position: 63.74
GC content: 68.35
Gene sequence:
>417_bases ATGACACCCTGCATCCATGGCATAGACCACATCCACGTCTACGCGCGCGACCGCGCCGCCGCCGAGTCCTGGTACCGCCG CGTGCTGGGCCTGTCCCGCGTGCCGGAGCTGGAGTTCTGGAGCCCGGGACGCGGCCCGCTGACTGTCGCCAACGCGGCCG GCACGCTCAAGCTGGCGTTGTTCGAGCGCCCCGATGTCGCGCCGGGATCCGTGATCGCGCTGGGCGTCGATGCGGAGGGC TTCCTGCAATGGCGCGCCCATCTGCGGCAGGAGCTGGGCGAGCCGCCGGAAGCGGTGGATCACGAAGCATCCTGGTCGAT GTATTTTTCCGACCCCGACGGCAATGGCTACGAGATCACCAGCTACGATTACGCCGAGCTGGCGGCACGCCTGTCCGGCG AAGCCATCCGGCCATGA
Upstream 100 bases:
>100_bases TGCACCCCTCCGATCTGGCCACCGCCCGCTATCTTGGCCGGCGCGTCGCCCGGCTGGCCCAACGCATGCGCGTCAGCGCC CTTACCGAGGAGCCACAGAC
Downstream 100 bases:
>100_bases AAAAACCTCCTGTCGCGGAAGGCAGGAGGTTTATCCGTTTCGCCGGTCAGATGGCCGGCCGTTCCGGCCCCGTGGGCCGG CGTGGCGTCAATGAGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTPCIHGIDHIHVYARDRAAAESWYRRVLGLSRVPELEFWSPGRGPLTVANAAGTLKLALFERPDVAPGSVIALGVDAEG FLQWRAHLRQELGEPPEAVDHEASWSMYFSDPDGNGYEITSYDYAELAARLSGEAIRP
Sequences:
>Translated_138_residues MTPCIHGIDHIHVYARDRAAAESWYRRVLGLSRVPELEFWSPGRGPLTVANAAGTLKLALFERPDVAPGSVIALGVDAEG FLQWRAHLRQELGEPPEAVDHEASWSMYFSDPDGNGYEITSYDYAELAARLSGEAIRP >Mature_137_residues TPCIHGIDHIHVYARDRAAAESWYRRVLGLSRVPELEFWSPGRGPLTVANAAGTLKLALFERPDVAPGSVIALGVDAEGF LQWRAHLRQELGEPPEAVDHEASWSMYFSDPDGNGYEITSYDYAELAARLSGEAIRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15249; Mature: 15118
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPCIHGIDHIHVYARDRAAAESWYRRVLGLSRVPELEFWSPGRGPLTVANAAGTLKLAL CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE FERPDVAPGSVIALGVDAEGFLQWRAHLRQELGEPPEAVDHEASWSMYFSDPDGNGYEIT ECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEC SYDYAELAARLSGEAIRP CCCHHHHHHHHCCCCCCC >Mature Secondary Structure TPCIHGIDHIHVYARDRAAAESWYRRVLGLSRVPELEFWSPGRGPLTVANAAGTLKLAL CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE FERPDVAPGSVIALGVDAEGFLQWRAHLRQELGEPPEAVDHEASWSMYFSDPDGNGYEIT ECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEC SYDYAELAARLSGEAIRP CCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA