| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498195
Identifier: 34498195
GI number: 34498195
Start: 2975296
End: 2977089
Strand: Direct
Name: 34498195
Synonym: CV_2740
Alternate gene names: NA
Gene position: 2975296-2977089 (Clockwise)
Preceding gene: 34498194
Following gene: 34498197
Centisome position: 62.62
GC content: 69.29
Gene sequence:
>1794_bases ATGCGATTACCCGAAGCGCTCATGCCATGGCATGACTGCCTGAACGGCTTTTCCGCCGAGCTCGCCACCGAGCTGGGCGA GCTACTGCGACGCCTCGCCCCGGCGCTGGGCGTCCACCATGACGCCAGCCGCGGCGACGAGCTGGCCGCGCAAGGCCTGG ACGACTTGCGCCGCCGCGGCTCCTACCAACGCCTGCTGGCGTCGGAATGGCTGCTGGCCGACGAAGTCCCCGACGAATTC CTGCGCCGCGCCGCCAGCGGCGAACATCTATTCCTGTCGCCCGCCCCGCGCGAACGCCAGGCCGACCGGCGCATCGTCGC GCTGTTCCATGCCGGCAGCTGGCAGCTGGGCGCGCCCAGGCTGGCCCATCTGGCGCTGTGCATCCTGCTCGATCACCGCG CCAGGGCCGCCGGCGGCGAATTCCATTGGGGCAGCCTGCAGGCGCCGGGCGAATGGCGGCAAGGTGCCGCGCCCGATGCG CTGAAACAGCTGCTGCGTGCCCGCGCCTACCGCAATTTCAACGCCCAGCTGTACCAGGCGTGGCTCGACGATCTGTCTAC GCGGCCCGCCGCCGACGAGTGCTGGCTGGTAGGCTACCCCCTGGACCAGCAAGGCCTGCTGGCGCCGCAGTTCACCCACC AGGCCGACATCGCGCCCACGCTGCGCGGCGACGCGTTGCGCGTCGCCATCCGCGATCGCCGCGGCGAGCGCGCGCTAAAG CTGCCGCTGCCGTCCGGCGATGCCGGCCTCGCGCTGCTGCAGGGGCGCTTCCAAGCCGGCCAGGCTACCGTGCGGACAGA GACGCGGCGCTTTTCCCTGCGTCACGCGCCGCTGCTGTCTCCCAATGGCCGCCATGTCGCCGTCTCGCTTCAGGGCGGCT ACGCGGCACTGATGCTGCCGGTGGACAAACCGGGACAAACATCGAAACAGAAGGCGCGCCAGCTGCAATGGCACAGGGCC AGCACCCTGCTGGCGCGGGCATTCACGGCCAAGACCCTGGGCGCCGTGGTTCAGCGCGGCGCCCAGCTGAGCTGCCTGCA GTTCCCGCGCATAGGCAAGGTGCCGCTGCCGCAGCAGGCCGAATTCCATGCTTCCCCGGGATCCTCCACCTTGCTGGATG CCGCCTGGCTGCCCGGCAAATCCGGCGGCAGGCTGTATTTGCGCGACTTGAACGGCAATCTTGTCTATTGGGAAAGCGGG GGCGCTGCCGGAACCGCCCCCATGCGCCAACAATGCGGCGGCGTGCAGGCCCTCTGCCAGATAGACGGCGCCTCCCTGCT ATACGCCCGCCAGCAGAACGGCCAGCTCCGTCTAGGCTGGCTGGGCGCCGATCACGACCAGAAGGCGGTGGAAGTCGCCC CCGGCATCGCGGCCGACACCTATAGTCGAGTGTTGCTGCACGGGCTGCCGCAAGACCGGCGCTTCGCCTGCGCGGTCCTG CTGCGCGGCGGCGAGCGGGAAAGCTGGCGGCTACACGCCGGCAGCGGCGGCGGCGCGCCGGATGGCCGGGAATGCCTGCT TCCCGCAGGCTGGCGCGCGATAGGCGTGCAATTGACCGACAAGCCGCGCTTGCTGCTGGTCCACGACAAGCAGAATCAGA TCGCCCTGCTGGACGAAGACAAGATCCTGCCGTTGTACGGGACTGCGTCGCCGATCGCCCGGCTCAGCTATACGCCCTCC TGCGCCGGCATCGCGCTGCTGACCGAACAAAGAGAGTTGATCGTGTACTCCCTGGCCGCCCGCGCCGTGGTTCTCCATCT GCAAAACCAGGCCGCAGGCAAAGCACATGACTGA
Upstream 100 bases:
>100_bases CCCTTGAACCGGCAATGGCCGGCCGGCGACGACTTGCTGGCCGACATCCGCCGCCGCTGGAGCGGCGCATACCGCTCCTG AACTCCGGCTGACCATACTT
Downstream 100 bases:
>100_bases AAACCTCTCCTTAGGCTCCGAAATACGCCAGCCGGTGCTGAGCGGCCGCGCATGGCTGTCCGGCCTCTGGTTGCCCGCCG ACCGGTACGGCGAGTCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MRLPEALMPWHDCLNGFSAELATELGELLRRLAPALGVHHDASRGDELAAQGLDDLRRRGSYQRLLASEWLLADEVPDEF LRRAASGEHLFLSPAPRERQADRRIVALFHAGSWQLGAPRLAHLALCILLDHRARAAGGEFHWGSLQAPGEWRQGAAPDA LKQLLRARAYRNFNAQLYQAWLDDLSTRPAADECWLVGYPLDQQGLLAPQFTHQADIAPTLRGDALRVAIRDRRGERALK LPLPSGDAGLALLQGRFQAGQATVRTETRRFSLRHAPLLSPNGRHVAVSLQGGYAALMLPVDKPGQTSKQKARQLQWHRA STLLARAFTAKTLGAVVQRGAQLSCLQFPRIGKVPLPQQAEFHASPGSSTLLDAAWLPGKSGGRLYLRDLNGNLVYWESG GAAGTAPMRQQCGGVQALCQIDGASLLYARQQNGQLRLGWLGADHDQKAVEVAPGIAADTYSRVLLHGLPQDRRFACAVL LRGGERESWRLHAGSGGGAPDGRECLLPAGWRAIGVQLTDKPRLLLVHDKQNQIALLDEDKILPLYGTASPIARLSYTPS CAGIALLTEQRELIVYSLAARAVVLHLQNQAAGKAHD
Sequences:
>Translated_597_residues MRLPEALMPWHDCLNGFSAELATELGELLRRLAPALGVHHDASRGDELAAQGLDDLRRRGSYQRLLASEWLLADEVPDEF LRRAASGEHLFLSPAPRERQADRRIVALFHAGSWQLGAPRLAHLALCILLDHRARAAGGEFHWGSLQAPGEWRQGAAPDA LKQLLRARAYRNFNAQLYQAWLDDLSTRPAADECWLVGYPLDQQGLLAPQFTHQADIAPTLRGDALRVAIRDRRGERALK LPLPSGDAGLALLQGRFQAGQATVRTETRRFSLRHAPLLSPNGRHVAVSLQGGYAALMLPVDKPGQTSKQKARQLQWHRA STLLARAFTAKTLGAVVQRGAQLSCLQFPRIGKVPLPQQAEFHASPGSSTLLDAAWLPGKSGGRLYLRDLNGNLVYWESG GAAGTAPMRQQCGGVQALCQIDGASLLYARQQNGQLRLGWLGADHDQKAVEVAPGIAADTYSRVLLHGLPQDRRFACAVL LRGGERESWRLHAGSGGGAPDGRECLLPAGWRAIGVQLTDKPRLLLVHDKQNQIALLDEDKILPLYGTASPIARLSYTPS CAGIALLTEQRELIVYSLAARAVVLHLQNQAAGKAHD >Mature_597_residues MRLPEALMPWHDCLNGFSAELATELGELLRRLAPALGVHHDASRGDELAAQGLDDLRRRGSYQRLLASEWLLADEVPDEF LRRAASGEHLFLSPAPRERQADRRIVALFHAGSWQLGAPRLAHLALCILLDHRARAAGGEFHWGSLQAPGEWRQGAAPDA LKQLLRARAYRNFNAQLYQAWLDDLSTRPAADECWLVGYPLDQQGLLAPQFTHQADIAPTLRGDALRVAIRDRRGERALK LPLPSGDAGLALLQGRFQAGQATVRTETRRFSLRHAPLLSPNGRHVAVSLQGGYAALMLPVDKPGQTSKQKARQLQWHRA STLLARAFTAKTLGAVVQRGAQLSCLQFPRIGKVPLPQQAEFHASPGSSTLLDAAWLPGKSGGRLYLRDLNGNLVYWESG GAAGTAPMRQQCGGVQALCQIDGASLLYARQQNGQLRLGWLGADHDQKAVEVAPGIAADTYSRVLLHGLPQDRRFACAVL LRGGERESWRLHAGSGGGAPDGRECLLPAGWRAIGVQLTDKPRLLLVHDKQNQIALLDEDKILPLYGTASPIARLSYTPS CAGIALLTEQRELIVYSLAARAVVLHLQNQAAGKAHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65076; Mature: 65076
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPEALMPWHDCLNGFSAELATELGELLRRLAPALGVHHDASRGDELAAQGLDDLRRRG CCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHCC SYQRLLASEWLLADEVPDEFLRRAASGEHLFLSPAPRERQADRRIVALFHAGSWQLGAPR HHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCH LAHLALCILLDHRARAAGGEFHWGSLQAPGEWRQGAAPDALKQLLRARAYRNFNAQLYQA HHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH WLDDLSTRPAADECWLVGYPLDQQGLLAPQFTHQADIAPTLRGDALRVAIRDRRGERALK HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE LPLPSGDAGLALLQGRFQAGQATVRTETRRFSLRHAPLLSPNGRHVAVSLQGGYAALMLP ECCCCCCCCCCEEECCCCCCCEEEEEHHHHEEECCCCCCCCCCCEEEEEECCCEEEEEEE VDKPGQTSKQKARQLQWHRASTLLARAFTAKTLGAVVQRGAQLSCLQFPRIGKVPLPQQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC EFHASPGSSTLLDAAWLPGKSGGRLYLRDLNGNLVYWESGGAAGTAPMRQQCGGVQALCQ CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHCCCCEEEEE IDGASLLYARQQNGQLRLGWLGADHDQKAVEVAPGIAADTYSRVLLHGLPQDRRFACAVL ECCCEEEEEECCCCCEEEEEECCCCCCCHHEECCCCCHHHHHHHHHHCCCCCCCEEEEEE LRGGERESWRLHAGSGGGAPDGRECLLPAGWRAIGVQLTDKPRLLLVHDKQNQIALLDED EECCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEECCC KILPLYGTASPIARLSYTPSCAGIALLTEQRELIVYSLAARAVVLHLQNQAAGKAHD CEEEEECCCCCHHHEECCCCCCCEEEEECCCCEEEHHHHHHEEEEEECCCCCCCCCC >Mature Secondary Structure MRLPEALMPWHDCLNGFSAELATELGELLRRLAPALGVHHDASRGDELAAQGLDDLRRRG CCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHCC SYQRLLASEWLLADEVPDEFLRRAASGEHLFLSPAPRERQADRRIVALFHAGSWQLGAPR HHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCH LAHLALCILLDHRARAAGGEFHWGSLQAPGEWRQGAAPDALKQLLRARAYRNFNAQLYQA HHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH WLDDLSTRPAADECWLVGYPLDQQGLLAPQFTHQADIAPTLRGDALRVAIRDRRGERALK HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE LPLPSGDAGLALLQGRFQAGQATVRTETRRFSLRHAPLLSPNGRHVAVSLQGGYAALMLP ECCCCCCCCCCEEECCCCCCCEEEEEHHHHEEECCCCCCCCCCCEEEEEECCCEEEEEEE VDKPGQTSKQKARQLQWHRASTLLARAFTAKTLGAVVQRGAQLSCLQFPRIGKVPLPQQA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC EFHASPGSSTLLDAAWLPGKSGGRLYLRDLNGNLVYWESGGAAGTAPMRQQCGGVQALCQ CCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHCCCCEEEEE IDGASLLYARQQNGQLRLGWLGADHDQKAVEVAPGIAADTYSRVLLHGLPQDRRFACAVL ECCCEEEEEECCCCCEEEEEECCCCCCCHHEECCCCCHHHHHHHHHHCCCCCCCEEEEEE LRGGERESWRLHAGSGGGAPDGRECLLPAGWRAIGVQLTDKPRLLLVHDKQNQIALLDED EECCCCCCEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEECCC KILPLYGTASPIARLSYTPSCAGIALLTEQRELIVYSLAARAVVLHLQNQAAGKAHD CEEEEECCCCCHHHEECCCCCCCEEEEECCCCEEEHHHHHHEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA