Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498173

Identifier: 34498173

GI number: 34498173

Start: 2944556

End: 2945017

Strand: Direct

Name: 34498173

Synonym: CV_2718

Alternate gene names: NA

Gene position: 2944556-2945017 (Clockwise)

Preceding gene: 34498172

Following gene: 34498187

Centisome position: 61.98

GC content: 67.1

Gene sequence:

>462_bases
ATGAAAGCCATCATCCGACTCATTCCCCTCGCCCTGCTGACCCTGGCCGTCCACAGCCAGGCCGCCGAGCCCGCCTTCCT
GGCCCAGCCGGCAGGACAAGCTGTGGTAATCAACGGCAAGACCTATTACAAGCAGACGCCGCAATCCAAGTTCGGCGTAT
CCGCCCGCAGCGCCGGCGCCGTTGCGCCCGCGCTGAAGCGCGGCGACGTGGTGCAGGCGCCGAAGCAGCTGGTGCCGTCC
GTCGTCAGCGGCACCGTGCTGGTGCAGCTGGCCTCGCCGCAGGATGAGGCCGCCGTCGCGCGCGATCACAACCTGATCGT
GCGCTACCGCACCGCCAGCGTGGTGGTGTTCACCACCCCGGCTCAGGCTGACCTGCTGGCGCTGCAGCAGAAGCTGTCCG
CCGACAAGCGGGTGAAGAAGGCGCAGCTGGAGCTGGCCAGCAACGACAAGCAAATCGAGTAA

Upstream 100 bases:

>100_bases
GCAATCGCAACACCGGCGCCAACACCGTCTATTCCCTGCCTAACGCGGAAGGTAAACTGAAATCGTGGTCGATCCGCTTC
TTCGGCCACCGGAGCGCAGC

Downstream 100 bases:

>100_bases
GACCCGCTTCCGGCCAGGAAACGGCCCCGGCGATGCCCGGGGCCGTTTTGCTTTCCTGTACTCTCCGCTCCCGAAGATCG
CCAGCGCCCGCTCGGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKAIIRLIPLALLTLAVHSQAAEPAFLAQPAGQAVVINGKTYYKQTPQSKFGVSARSAGAVAPALKRGDVVQAPKQLVPS
VVSGTVLVQLASPQDEAAVARDHNLIVRYRTASVVVFTTPAQADLLALQQKLSADKRVKKAQLELASNDKQIE

Sequences:

>Translated_153_residues
MKAIIRLIPLALLTLAVHSQAAEPAFLAQPAGQAVVINGKTYYKQTPQSKFGVSARSAGAVAPALKRGDVVQAPKQLVPS
VVSGTVLVQLASPQDEAAVARDHNLIVRYRTASVVVFTTPAQADLLALQQKLSADKRVKKAQLELASNDKQIE
>Mature_153_residues
MKAIIRLIPLALLTLAVHSQAAEPAFLAQPAGQAVVINGKTYYKQTPQSKFGVSARSAGAVAPALKRGDVVQAPKQLVPS
VVSGTVLVQLASPQDEAAVARDHNLIVRYRTASVVVFTTPAQADLLALQQKLSADKRVKKAQLELASNDKQIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16231; Mature: 16231

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIIRLIPLALLTLAVHSQAAEPAFLAQPAGQAVVINGKTYYKQTPQSKFGVSARSAGA
CHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCEEECCCCCHHCCCCCCCCCC
VAPALKRGDVVQAPKQLVPSVVSGTVLVQLASPQDEAAVARDHNLIVRYRTASVVVFTTP
CCHHHHCCCHHHCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCEEEEEECCEEEEEECC
AQADLLALQQKLSADKRVKKAQLELASNDKQIE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKAIIRLIPLALLTLAVHSQAAEPAFLAQPAGQAVVINGKTYYKQTPQSKFGVSARSAGA
CHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECCCEEECCCCCHHCCCCCCCCCC
VAPALKRGDVVQAPKQLVPSVVSGTVLVQLASPQDEAAVARDHNLIVRYRTASVVVFTTP
CCHHHHCCCHHHCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCEEEEEECCEEEEEECC
AQADLLALQQKLSADKRVKKAQLELASNDKQIE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA