| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497917
Identifier: 34497917
GI number: 34497917
Start: 2648816
End: 2649727
Strand: Direct
Name: 34497917
Synonym: CV_2462
Alternate gene names: NA
Gene position: 2648816-2649727 (Clockwise)
Preceding gene: 34497911
Following gene: 34497920
Centisome position: 55.75
GC content: 64.91
Gene sequence:
>912_bases ATGCTCGTCTTTCCGTCTGCCGCCTTGCGGCGAAAACTCGCCGGTTTCGCCCTGCTGGCGTTTGCCGCCGGAGCAAGCCT CGCGGCCGAGCCTTACCAAATCACCTGGGTGCTGTCGGACTGGGCGCCCAACTTCATCATTCGCGACGGCAAGCCCACCA CCGGACAGAACGATGTCTACCTGAAACTGATCATCGCCCGTTGGCCGGAGGCCGAGCATCGCTTCATGGTGATGAGCACC GCGCGCAGCACGCTAGAGCTGCAGCGCGGCAGCCAGTTGTGCCGGATGAATTTGATCCCGACGCCCGAGCGCGAGAAATT CGCTTTTTTCACGCTGACTCACATGCAGCTGCCGCTGCAATTGGTGATCCGCAGGGAGCTGGCGGCGCAGGCGCCTTTGA ACGAGGCGGGCGAAGTGGTACTTGAGAAATTGATCCTGAAGCCAGGGTTGCGCGGCATCACCGCCGCCGGCCGAAGCTAT ACGGCGGAGATCGACCGGCTGCTGGCCGATCGCAAGGGAGAGTCCAACGTCAGGGATATCCCCAACCTCCCCTCCAACGA TGGCCTGTTCAAGCTGCTGGAGCTGGGTCGCGCCGACTACACGCTGGACTACGAGCCCAACTTCAAATACCGCGAAGAGC AAAACCGCGATCATCCATTGGCCAGCCTGCCCATCGCCGGGGCGGCGCTGATCCCGGTGGGCATCGCCTGTCCGCGCACC CGCTGGGGGCGGATGGCCGTGATGAAGATAGACCAGTTGCTCAGCGAGGCCGTGGCGGATCCCGCCTACCGCCAGGCGCA GGATCGCTGGCTGTCGCCGGAATCCGTGCAGCGCTACCGCGTCGAGCTCGACCGTTTCTACCGCCAGCGCGCGCGGCCCG CCGACCCCGCGCGCTACGCGCTGCGACGCTGA
Upstream 100 bases:
>100_bases CCGTCAGTCAGGCAGGAACAGACCATCCGCCGCGGAATTGGTTGCTGAAAATCGACGGTCTAGAATCAAATCAGCGGCCT GGGCGCCGCCAGGAGTGCCG
Downstream 100 bases:
>100_bases CGCTATACCTGGAACTGCGCGACCGACAGCCTGAGGTTGCCGGTCACCTCGTCTATCCGCTGTATGCTTTCCGAGGCCTG GGTGGCGGCGACCGCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MLVFPSAALRRKLAGFALLAFAAGASLAAEPYQITWVLSDWAPNFIIRDGKPTTGQNDVYLKLIIARWPEAEHRFMVMST ARSTLELQRGSQLCRMNLIPTPEREKFAFFTLTHMQLPLQLVIRRELAAQAPLNEAGEVVLEKLILKPGLRGITAAGRSY TAEIDRLLADRKGESNVRDIPNLPSNDGLFKLLELGRADYTLDYEPNFKYREEQNRDHPLASLPIAGAALIPVGIACPRT RWGRMAVMKIDQLLSEAVADPAYRQAQDRWLSPESVQRYRVELDRFYRQRARPADPARYALRR
Sequences:
>Translated_303_residues MLVFPSAALRRKLAGFALLAFAAGASLAAEPYQITWVLSDWAPNFIIRDGKPTTGQNDVYLKLIIARWPEAEHRFMVMST ARSTLELQRGSQLCRMNLIPTPEREKFAFFTLTHMQLPLQLVIRRELAAQAPLNEAGEVVLEKLILKPGLRGITAAGRSY TAEIDRLLADRKGESNVRDIPNLPSNDGLFKLLELGRADYTLDYEPNFKYREEQNRDHPLASLPIAGAALIPVGIACPRT RWGRMAVMKIDQLLSEAVADPAYRQAQDRWLSPESVQRYRVELDRFYRQRARPADPARYALRR >Mature_303_residues MLVFPSAALRRKLAGFALLAFAAGASLAAEPYQITWVLSDWAPNFIIRDGKPTTGQNDVYLKLIIARWPEAEHRFMVMST ARSTLELQRGSQLCRMNLIPTPEREKFAFFTLTHMQLPLQLVIRRELAAQAPLNEAGEVVLEKLILKPGLRGITAAGRSY TAEIDRLLADRKGESNVRDIPNLPSNDGLFKLLELGRADYTLDYEPNFKYREEQNRDHPLASLPIAGAALIPVGIACPRT RWGRMAVMKIDQLLSEAVADPAYRQAQDRWLSPESVQRYRVELDRFYRQRARPADPARYALRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34385; Mature: 34385
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFPSAALRRKLAGFALLAFAAGASLAAEPYQITWVLSDWAPNFIIRDGKPTTGQNDVY CEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEE LKLIIARWPEAEHRFMVMSTARSTLELQRGSQLCRMNLIPTPEREKFAFFTLTHMQLPLQ EEEEEECCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEHHHHHHH LVIRRELAAQAPLNEAGEVVLEKLILKPGLRGITAAGRSYTAEIDRLLADRKGESNVRDI HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCC PNLPSNDGLFKLLELGRADYTLDYEPNFKYREEQNRDHPLASLPIAGAALIPVGIACPRT CCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCC RWGRMAVMKIDQLLSEAVADPAYRQAQDRWLSPESVQRYRVELDRFYRQRARPADPARYA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH LRR HCC >Mature Secondary Structure MLVFPSAALRRKLAGFALLAFAAGASLAAEPYQITWVLSDWAPNFIIRDGKPTTGQNDVY CEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEE LKLIIARWPEAEHRFMVMSTARSTLELQRGSQLCRMNLIPTPEREKFAFFTLTHMQLPLQ EEEEEECCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEHHHHHHH LVIRRELAAQAPLNEAGEVVLEKLILKPGLRGITAAGRSYTAEIDRLLADRKGESNVRDI HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCC PNLPSNDGLFKLLELGRADYTLDYEPNFKYREEQNRDHPLASLPIAGAALIPVGIACPRT CCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCC RWGRMAVMKIDQLLSEAVADPAYRQAQDRWLSPESVQRYRVELDRFYRQRARPADPARYA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH LRR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA