| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497869
Identifier: 34497869
GI number: 34497869
Start: 2600434
End: 2601615
Strand: Direct
Name: 34497869
Synonym: CV_2414
Alternate gene names: NA
Gene position: 2600434-2601615 (Clockwise)
Preceding gene: 34497868
Following gene: 34497870
Centisome position: 54.73
GC content: 63.37
Gene sequence:
>1182_bases ATGCGGGACGACGCTATTGCTGCCAGTCCAGGAGAAGCTCAAGGCGCCGCCTTGGGCGCTGGCATAGTTGGCCAGCGCGC TCTGGCTGGCGCTGTCCAGGGTCAGCCAGGGCAGCGTCGCCAGCTCGGACGATTGTGGCGGCACGCCATCCACGCGTGTA ATGACGCTGGCGAGCAGGCTGCTGAAGGCATTGTCGGAGTACAGGTCGATCTTCACTCTCCGTCCGCGCTGGAAGAAGGC GGAGATCAAAGCGTCGCCGGATGCAAGGCTGCCATTGTTGAAGCTGTCCAGTCCCAGCCAGGTGCTGCCGCACGTGCTGC CTTGCATGGTCAGCCTGGGCTGGCTGCTGCAGCCGGCGTTGCTGAGCGTGGCGATGGGCGTGCCGTCCCAGCCGGTGCCG GCGGCGTTGCGCTGGTAAACCTTGGCGGATTGCACGGCGTTGCTCACGCCGTTGGCGCTGGTGCCGATGTCAAACGAAAT CGCGCGGTAATAGCTGGGTTGCGGATTGCTGATGCCAACCCGCAGCGTGCGCTGCGCATTGGCGTTGACGTGTATTTCAT ACGGCGACGCCTGGCCCAGCAGTTTCCATGCCGTTGCGCCGTTGCGCAGCACCACCGCCATTTCCGCGCCTTCCTGCACG GCGCTGCCGTTGATGACGTCAAAGCCGACCGTGCAGATTTTGTCGCTGCCGGAGAAGTCGCAATCGCGCAGAGCGGGGTT GGCGACGCTGCCGCCGAGCAAGTTGCCTTGCGACAGGAAGCCGCAGATCATCGAAGCGAAATTGCTGGTATTGAGGGATT GCTGGTTGATGCTGAGCGTGAACTGCGGATCCAGCATACTGGCATTGTTGTTCAGCACGGTGGCGCAGGCGCTGGCGCTG CTGCTGCCGGCGGCGCTATTCAATGCGGCGAAGATCTGGCTGATGCTGGTCAGATCCAAGCCCAGCCCGTTGAGCAAGGT GCTGTCGCTCAGGCTGCCGGACTGGCTGCCGCTATTGTCCACGTAGAAGTTGCTGCTGCCAAAACGGCCTTCCAGTTGCA CGAAGGTATGCCCGTTATTGGTCCCGGTATTGGCGGCGATGGCGTCCAGCACCTTGTCCATGCCGGTGCGGTTGGCGCTG AAGGCCGTGGTGGTGAGGTCGGCGCCGCTGCTGAGGCCGGATGCGGCCAGCACTTGCGATAA
Upstream 100 bases:
>100_bases TGGACAGGTTGAAGCTGGCGCTGCCGGCGCTGCCCAGTTTGCCGCTCAGATCGATTTGCACCGGGCTGTTGCAGCTGCCG GCGTTGCAGAATGAGGCATC
Downstream 100 bases:
>100_bases GGCGTTTTGGAGTGTTTGCTGGCTGCTGTTGAGCGCGCCGGCGGACGGCGCGCCGCCGCTCATGATGCTGGCGGCGTCGC TGCCGGTGGCCAGCGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MRDDAIAASPGEAQGAALGAGIVGQRALAGAVQGQPGQRRQLGRLWRHAIHACNDAGEQAAEGIVGVQVDLHSPSALEEG GDQSVAGCKAAIVEAVQSQPGAAARAALHGQPGLAAAAGVAERGDGRAVPAGAGGVALVNLGGLHGVAHAVGAGADVKRN RAVIAGLRIADANPQRALRIGVDVYFIRRRLAQQFPCRCAVAQHHRHFRAFLHGAAVDDVKADRADFVAAGEVAIAQSGV GDAAAEQVALRQEAADHRSEIAGIEGLLVDAERELRIQHTGIVVQHGGAGAGAAAAGGAIQCGEDLADAGQIQAQPVEQG AVAQAAGLAAAIVHVEVAAAKTAFQLHEGMPVIGPGIGGDGVQHLVHAGAVGAEGRGGEVGAAAEAGCGQHLR
Sequences:
>Translated_393_residues MRDDAIAASPGEAQGAALGAGIVGQRALAGAVQGQPGQRRQLGRLWRHAIHACNDAGEQAAEGIVGVQVDLHSPSALEEG GDQSVAGCKAAIVEAVQSQPGAAARAALHGQPGLAAAAGVAERGDGRAVPAGAGGVALVNLGGLHGVAHAVGAGADVKRN RAVIAGLRIADANPQRALRIGVDVYFIRRRLAQQFPCRCAVAQHHRHFRAFLHGAAVDDVKADRADFVAAGEVAIAQSGV GDAAAEQVALRQEAADHRSEIAGIEGLLVDAERELRIQHTGIVVQHGGAGAGAAAAGGAIQCGEDLADAGQIQAQPVEQG AVAQAAGLAAAIVHVEVAAAKTAFQLHEGMPVIGPGIGGDGVQHLVHAGAVGAEGRGGEVGAAAEAGCGQHLR >Mature_393_residues MRDDAIAASPGEAQGAALGAGIVGQRALAGAVQGQPGQRRQLGRLWRHAIHACNDAGEQAAEGIVGVQVDLHSPSALEEG GDQSVAGCKAAIVEAVQSQPGAAARAALHGQPGLAAAAGVAERGDGRAVPAGAGGVALVNLGGLHGVAHAVGAGADVKRN RAVIAGLRIADANPQRALRIGVDVYFIRRRLAQQFPCRCAVAQHHRHFRAFLHGAAVDDVKADRADFVAAGEVAIAQSGV GDAAAEQVALRQEAADHRSEIAGIEGLLVDAERELRIQHTGIVVQHGGAGAGAAAAGGAIQCGEDLADAGQIQAQPVEQG AVAQAAGLAAAIVHVEVAAAKTAFQLHEGMPVIGPGIGGDGVQHLVHAGAVGAEGRGGEVGAAAEAGCGQHLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39047; Mature: 39047
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00147 ARGINASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDDAIAASPGEAQGAALGAGIVGQRALAGAVQGQPGQRRQLGRLWRHAIHACNDAGEQA CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AEGIVGVQVDLHSPSALEEGGDQSVAGCKAAIVEAVQSQPGAAARAALHGQPGLAAAAGV HCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCC AERGDGRAVPAGAGGVALVNLGGLHGVAHAVGAGADVKRNRAVIAGLRIADANPQRALRI CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEE GVDVYFIRRRLAQQFPCRCAVAQHHRHFRAFLHGAAVDDVKADRADFVAAGEVAIAQSGV CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHEECCCEEEECCCC GDAAAEQVALRQEAADHRSEIAGIEGLLVDAERELRIQHTGIVVQHGGAGAGAAAAGGAI CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHEEEEECCEEEEECCCCCCCHHCCCCC QCGEDLADAGQIQAQPVEQGAVAQAAGLAAAIVHVEVAAAKTAFQLHEGMPVIGPGIGGD CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH GVQHLVHAGAVGAEGRGGEVGAAAEAGCGQHLR HHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MRDDAIAASPGEAQGAALGAGIVGQRALAGAVQGQPGQRRQLGRLWRHAIHACNDAGEQA CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AEGIVGVQVDLHSPSALEEGGDQSVAGCKAAIVEAVQSQPGAAARAALHGQPGLAAAAGV HCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCC AERGDGRAVPAGAGGVALVNLGGLHGVAHAVGAGADVKRNRAVIAGLRIADANPQRALRI CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEEE GVDVYFIRRRLAQQFPCRCAVAQHHRHFRAFLHGAAVDDVKADRADFVAAGEVAIAQSGV CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHEECCCEEEECCCC GDAAAEQVALRQEAADHRSEIAGIEGLLVDAERELRIQHTGIVVQHGGAGAGAAAAGGAI CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHEEEEECCEEEEECCCCCCCHHCCCCC QCGEDLADAGQIQAQPVEQGAVAQAAGLAAAIVHVEVAAAKTAFQLHEGMPVIGPGIGGD CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH GVQHLVHAGAVGAEGRGGEVGAAAEAGCGQHLR HHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA