Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497870

Identifier: 34497870

GI number: 34497870

Start: 2601857

End: 2602264

Strand: Direct

Name: 34497870

Synonym: CV_2415

Alternate gene names: NA

Gene position: 2601857-2602264 (Clockwise)

Preceding gene: 34497869

Following gene: 34497871

Centisome position: 54.76

GC content: 61.27

Gene sequence:

>408_bases
CTGCCGTCGCTATTGACGCTGACGCTGACGGTCTGGCCATTGGCGCCCAGCACCGTCAGAGTGGCATTCTGCATCGGCGC
GCCGACGGCGATCGTGCCGGATAGCCTGGAAGAGCCGGTGCTTGCGCTCCCGCCTCCGCCGCCCCCGCATGAAACCAGCG
CGACACAGCAGGCAAGTCCAAGAAACGCGCGATGGATTCTCATTCCTTTTCCCCCTCGGTTCATACGGTTGTGTTCCCAG
ATTAGCCAATCCGCAAGCGCGTATGGATGTTTCTTCATCAACGCATCAGGGCCCGCGGGCATTGGAATGGGCTGGCGCGA
CGCCGCGGGGCGCGTGGAAGTGTGTTGCTGTTTTTTGCGATGCCAGACCCCCTGCGAAAAATGCACTTATCATGAGTGGG
CGACCTGA

Upstream 100 bases:

>100_bases
TTGGGCCACGGCGTAATGACAGGTATAGACCGCGTTGACCAGGCCGCAGGCTTGCAGGCGGAAGGGCGCGGTCAGCGCGC
TGACGTCCAGGTTGCTGTAG

Downstream 100 bases:

>100_bases
CAATAACTAGGACTGGAGAAGAGGCATGGCTTGGACCAAGGAGCAGAAACAAACGGTGTTCGCCTGCTATCTGGGCTGGA
CGCTGGACGCGTTCGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASPRNARWILIPFPPRFIRLCSQ
ISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLRCQTPCEKCTYHEWAT

Sequences:

>Translated_135_residues
MPSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASPRNARWILIPFPPRFIRLCSQ
ISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLRCQTPCEKCTYHEWAT
>Mature_134_residues
PSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASPRNARWILIPFPPRFIRLCSQI
SQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLRCQTPCEKCTYHEWAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14628; Mature: 14497

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASP
CCCEEEEEEEEECCCCCCEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCC
RNARWILIPFPPRFIRLCSQISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLR
CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
CQTPCEKCTYHEWAT
CCCCHHHCCCCCCCC
>Mature Secondary Structure 
PSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASP
CCEEEEEEEEECCCCCCEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCC
RNARWILIPFPPRFIRLCSQISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLR
CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
CQTPCEKCTYHEWAT
CCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA