| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497870
Identifier: 34497870
GI number: 34497870
Start: 2601857
End: 2602264
Strand: Direct
Name: 34497870
Synonym: CV_2415
Alternate gene names: NA
Gene position: 2601857-2602264 (Clockwise)
Preceding gene: 34497869
Following gene: 34497871
Centisome position: 54.76
GC content: 61.27
Gene sequence:
>408_bases CTGCCGTCGCTATTGACGCTGACGCTGACGGTCTGGCCATTGGCGCCCAGCACCGTCAGAGTGGCATTCTGCATCGGCGC GCCGACGGCGATCGTGCCGGATAGCCTGGAAGAGCCGGTGCTTGCGCTCCCGCCTCCGCCGCCCCCGCATGAAACCAGCG CGACACAGCAGGCAAGTCCAAGAAACGCGCGATGGATTCTCATTCCTTTTCCCCCTCGGTTCATACGGTTGTGTTCCCAG ATTAGCCAATCCGCAAGCGCGTATGGATGTTTCTTCATCAACGCATCAGGGCCCGCGGGCATTGGAATGGGCTGGCGCGA CGCCGCGGGGCGCGTGGAAGTGTGTTGCTGTTTTTTGCGATGCCAGACCCCCTGCGAAAAATGCACTTATCATGAGTGGG CGACCTGA
Upstream 100 bases:
>100_bases TTGGGCCACGGCGTAATGACAGGTATAGACCGCGTTGACCAGGCCGCAGGCTTGCAGGCGGAAGGGCGCGGTCAGCGCGC TGACGTCCAGGTTGCTGTAG
Downstream 100 bases:
>100_bases CAATAACTAGGACTGGAGAAGAGGCATGGCTTGGACCAAGGAGCAGAAACAAACGGTGTTCGCCTGCTATCTGGGCTGGA CGCTGGACGCGTTCGACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASPRNARWILIPFPPRFIRLCSQ ISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLRCQTPCEKCTYHEWAT
Sequences:
>Translated_135_residues MPSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASPRNARWILIPFPPRFIRLCSQ ISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLRCQTPCEKCTYHEWAT >Mature_134_residues PSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASPRNARWILIPFPPRFIRLCSQI SQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLRCQTPCEKCTYHEWAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14628; Mature: 14497
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASP CCCEEEEEEEEECCCCCCEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCC RNARWILIPFPPRFIRLCSQISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLR CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH CQTPCEKCTYHEWAT CCCCHHHCCCCCCCC >Mature Secondary Structure PSLLTLTLTVWPLAPSTVRVAFCIGAPTAIVPDSLEEPVLALPPPPPPHETSATQQASP CCEEEEEEEEECCCCCCEEEEEEECCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCCC RNARWILIPFPPRFIRLCSQISQSASAYGCFFINASGPAGIGMGWRDAAGRVEVCCCFLR CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH CQTPCEKCTYHEWAT CCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA