| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497859
Identifier: 34497859
GI number: 34497859
Start: 2588781
End: 2589851
Strand: Direct
Name: 34497859
Synonym: CV_2404
Alternate gene names: NA
Gene position: 2588781-2589851 (Clockwise)
Preceding gene: 34497858
Following gene: 34497860
Centisome position: 54.49
GC content: 64.43
Gene sequence:
>1071_bases TTGAAGTGTTCAGGGAAGAGGCAAGTGACGGTCGATATTTATTCGCGCATACGCCAAGCGGCATTCGAAATGGTGGCGGA GGGTAACTGGCCGACGGTGGCGGATGTCCGCGCACGTCTTGGCAGCGGCTCCAACACCACCATCAACAATACGTTGAAGA GCTGGAGGCAAGAGTTTCTCGGCAAGGTGGCCATCTCCTCGCGCCGTCCCGATTGGCCGCCGGCTTTGGCTGAAGCTTTC GACCAGGTCTGGCAAAAAGCCTGCGATGAGGCGGATCTGCAGCTGGCGACGGTCCGCGAAGAGGCCGAGGCGGAGGCCGC AGCCCTTGGGAAGAGGCTTCAGGAAGCGGAGCGCAAGAACGAATCGGCCGAGGCTGAGATCCAGTCGCTGCGACACGAAC TGGAGCTGCGCGCCGCCCGGCAGGTGGAGTTGGACAGCCTGCTGCAACGCGAGAAGCTGCTGACGCAATCTTTGGAGAAA GAGCGAGCGGCGCTGCTGGAGGCGGCCGCCGAATCGCGGGAAGAGTTGGGACGGGAGCGCAAGCTGGCGGCGGCCCGCCT GGAGGAGTTGGAGAGCGAGCATCAGCGGCAATTGCTGGCGGCAAGAGAGGAGTCCGAGCGAAAAGAGACGCTGGCCTATG AGCGGCTTGAGGGACTGCGAGTGCGTCTGTACCAGCAAGTGGAAGAAGAGCGCCAGGACATGAAGCTGCAGCTGCAAAAG CTGGAGGACGCCTTGACTCAGGCAAGACAGGACGCCGCCAAGGTGGAGGCCCTGTGGCAAGAGAGGCTGTTGGAGCGCGA GCGAGAGAACGGCGGACTGCAAGCCAGGCTGGATCTGCTGGCCCAGAGGGAGGATGCCTTGCGTCGAGAGGCGCTGGAAC GCCAACAGGCGCTGGATGCCGGCAATGTCCGGTTGCAGGCGCTGGCCGCGCAGTGCGCGCGCCTGGAGGAAAGGTCGGAG CAAGAATGGCTCCGACGGCTGGGGCGCGCCTGCGAGGATTGGGAGGCAGGGGAGAGGCCGGCGCCCGAGCAGCCGCTGCG GGCGTGGCTGAAAGAGAGGCTCGTCGACTGA
Upstream 100 bases:
>100_bases CCGATAAGTTTAATTATGGGAAAAATTTTACCAGAATGATAATTTAATCATGTAATACGTAATATATTTACCGCCTTGTA TCTGCTACACTCCAAGCCAA
Downstream 100 bases:
>100_bases ATCGTCGCACCTGTCCATCGGAATGGGGCGAAATCGCGGGGCGAGGACATGGGCTTGGCTATGCTGAATGAGTTTCAACC TTCCACAGCAAGGAGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKCSGKRQVTVDIYSRIRQAAFEMVAEGNWPTVADVRARLGSGSNTTINNTLKSWRQEFLGKVAISSRRPDWPPALAEAF DQVWQKACDEADLQLATVREEAEAEAAALGKRLQEAERKNESAEAEIQSLRHELELRAARQVELDSLLQREKLLTQSLEK ERAALLEAAAESREELGRERKLAAARLEELESEHQRQLLAAREESERKETLAYERLEGLRVRLYQQVEEERQDMKLQLQK LEDALTQARQDAAKVEALWQERLLERERENGGLQARLDLLAQREDALRREALERQQALDAGNVRLQALAAQCARLEERSE QEWLRRLGRACEDWEAGERPAPEQPLRAWLKERLVD
Sequences:
>Translated_356_residues MKCSGKRQVTVDIYSRIRQAAFEMVAEGNWPTVADVRARLGSGSNTTINNTLKSWRQEFLGKVAISSRRPDWPPALAEAF DQVWQKACDEADLQLATVREEAEAEAAALGKRLQEAERKNESAEAEIQSLRHELELRAARQVELDSLLQREKLLTQSLEK ERAALLEAAAESREELGRERKLAAARLEELESEHQRQLLAAREESERKETLAYERLEGLRVRLYQQVEEERQDMKLQLQK LEDALTQARQDAAKVEALWQERLLERERENGGLQARLDLLAQREDALRREALERQQALDAGNVRLQALAAQCARLEERSE QEWLRRLGRACEDWEAGERPAPEQPLRAWLKERLVD >Mature_356_residues MKCSGKRQVTVDIYSRIRQAAFEMVAEGNWPTVADVRARLGSGSNTTINNTLKSWRQEFLGKVAISSRRPDWPPALAEAF DQVWQKACDEADLQLATVREEAEAEAAALGKRLQEAERKNESAEAEIQSLRHELELRAARQVELDSLLQREKLLTQSLEK ERAALLEAAAESREELGRERKLAAARLEELESEHQRQLLAAREESERKETLAYERLEGLRVRLYQQVEEERQDMKLQLQK LEDALTQARQDAAKVEALWQERLLERERENGGLQARLDLLAQREDALRREALERQQALDAGNVRLQALAAQCARLEERSE QEWLRRLGRACEDWEAGERPAPEQPLRAWLKERLVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41001; Mature: 41001
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCSGKRQVTVDIYSRIRQAAFEMVAEGNWPTVADVRARLGSGSNTTINNTLKSWRQEFL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GKVAISSRRPDWPPALAEAFDQVWQKACDEADLQLATVREEAEAEAAALGKRLQEAERKN HHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ESAEAEIQSLRHELELRAARQVELDSLLQREKLLTQSLEKERAALLEAAAESREELGRER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAAARLEELESEHQRQLLAAREESERKETLAYERLEGLRVRLYQQVEEERQDMKLQLQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDALTQARQDAAKVEALWQERLLERERENGGLQARLDLLAQREDALRREALERQQALDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GNVRLQALAAQCARLEERSEQEWLRRLGRACEDWEAGERPAPEQPLRAWLKERLVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKCSGKRQVTVDIYSRIRQAAFEMVAEGNWPTVADVRARLGSGSNTTINNTLKSWRQEFL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GKVAISSRRPDWPPALAEAFDQVWQKACDEADLQLATVREEAEAEAAALGKRLQEAERKN HHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ESAEAEIQSLRHELELRAARQVELDSLLQREKLLTQSLEKERAALLEAAAESREELGRER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAAARLEELESEHQRQLLAAREESERKETLAYERLEGLRVRLYQQVEEERQDMKLQLQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEDALTQARQDAAKVEALWQERLLERERENGGLQARLDLLAQREDALRREALERQQALDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GNVRLQALAAQCARLEERSEQEWLRRLGRACEDWEAGERPAPEQPLRAWLKERLVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA