| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497858
Identifier: 34497858
GI number: 34497858
Start: 2586852
End: 2588276
Strand: Direct
Name: 34497858
Synonym: CV_2403
Alternate gene names: NA
Gene position: 2586852-2588276 (Clockwise)
Preceding gene: 34497854
Following gene: 34497859
Centisome position: 54.45
GC content: 55.72
Gene sequence:
>1425_bases GTGGAGTGGAAAATGTCCCTTTTTCAGAGAGGCGGAAGCCGCAAGCTGGCTTGCCTGGGTTGGCCCATCGCGTTGCTGCT CGGCAGCGGGTCTGGCGCGTTCGCCCATGCTGGCGGCGATCAGGCATTGAAGGATGAAAGACCCCATCTATTGAGGACTG CGCAAGACTTGAGCCATGGCGCTTTTATCAATAAACAGGCCAGAACAGAGGCCGCTTTTGACAAGAACGCCTTGATGGAC GCATTTCAAAAGCGCATTCCTGTCCATCTGGATTTCTTCACGCCAGGCGCTTCGGATCATAATCTGGTGTCGATTTACAT GTCGAAAGACGGCGTATTGTTCACGCGGGAGGCAAGCCCTGTTTTCAAAGGCTTGAACAGCCATAAAGCTCCGGTTTACG GCCTTTTGTGGGTCTCGGACAAGGAAAAGGCGATTTTTTACGTGCCCAGCAGCCAAATGTCTACAGGGCAAAACCTGGAT TACGCCTTGAAGTTGCAAGCTACGGAAGAGGCGGCCCATCATGAGGCTTACCCTGTATTCCAGCTTGATACTGCAGGTGG GGAGGATATCCCTCAAGGCGCGTTGGCTGACAAGGTTATTTCTCAAGCCTCTGTGCCCATCCGCAACCCGTATGCTGAAA GCGCCGATGTCGTCGCGAGGCTGAATAAACGCCTCAATCATGCGGTTCATGACTGCGGCCTTGATGAGCGTGGCGATAAG AAACCTGCTTGGCTGTGCTCCGGTTTGATCATGAGATCGACAAGCCATCTTTCCCCTTGGGCCAGCGCGTCGGTCGCTGC TCATTATTTTGTCCGGGCGGATACGAGAACCCGGCACCTGATGTCGGGCGCGGGGCGAGGGCTTATTTTGAAACCGACCG CGGATCTGGGCGAAAACTGGCTGAAGTGCATTTACCCGCGCGACGCGAATTCAGCGTGGGGGGAAGGCGGGAATTACCAT CGGGACCATGCGAACTTTCTGTGCAGCGACGCGGCAACTCAGATGAGCCAGGCGGATCTCAGTTCTTGCTCGAGAGTGCT GGGCATCAGGGCAGGCGCGTCTGCGGCGCAATGGACGGCTGCCTTCCTCGCCAAATATCCTTATCGACGCAACGGCGAGG AGGCGCTTCGCCAATGCTCGCTCAGCGTGCATGACGCGAGTCAGTTCGAGGCTGCCATTCAGGTTTCGGCTACCAATCTG AAGGCCTCGGATGATCCTTGGAATGAGTTGATAGTCAAGCCATGGCAGGCGGCCGACATTCCGGAGATCGAGGCTTTTTT CTGGAGCGCGAACTCCGAGGGCCTGTTTTACGACGATGACTTTCTCAAGGCCAAGGAAATGGCCAAGAAATATGTTTCCC CCGACGGCAAGCCCGTTCCGGTGGTGAAGGTGAATTTGCACGCGAATGTCGTGAGCTTGCCATAA
Upstream 100 bases:
>100_bases CAAGTTTTAAAAGCGTGAATCCGATGAGTTGAGATGAGGTGATGCGAGTTGTCCGCGGCATGGGGATCGGCTGCGCTGGC TTGCTTATTCCTGAATAACT
Downstream 100 bases:
>100_bases GAAGAGGGGCTCGATCTTTCCGTTGCGCGGGAGGGGGCGGTTTGTACGGCGAGCCGTCAAGGAAGCTTGCCGAAAGGTTC CGCTCGCCCTCGAATCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MEWKMSLFQRGGSRKLACLGWPIALLLGSGSGAFAHAGGDQALKDERPHLLRTAQDLSHGAFINKQARTEAAFDKNALMD AFQKRIPVHLDFFTPGASDHNLVSIYMSKDGVLFTREASPVFKGLNSHKAPVYGLLWVSDKEKAIFYVPSSQMSTGQNLD YALKLQATEEAAHHEAYPVFQLDTAGGEDIPQGALADKVISQASVPIRNPYAESADVVARLNKRLNHAVHDCGLDERGDK KPAWLCSGLIMRSTSHLSPWASASVAAHYFVRADTRTRHLMSGAGRGLILKPTADLGENWLKCIYPRDANSAWGEGGNYH RDHANFLCSDAATQMSQADLSSCSRVLGIRAGASAAQWTAAFLAKYPYRRNGEEALRQCSLSVHDASQFEAAIQVSATNL KASDDPWNELIVKPWQAADIPEIEAFFWSANSEGLFYDDDFLKAKEMAKKYVSPDGKPVPVVKVNLHANVVSLP
Sequences:
>Translated_474_residues MEWKMSLFQRGGSRKLACLGWPIALLLGSGSGAFAHAGGDQALKDERPHLLRTAQDLSHGAFINKQARTEAAFDKNALMD AFQKRIPVHLDFFTPGASDHNLVSIYMSKDGVLFTREASPVFKGLNSHKAPVYGLLWVSDKEKAIFYVPSSQMSTGQNLD YALKLQATEEAAHHEAYPVFQLDTAGGEDIPQGALADKVISQASVPIRNPYAESADVVARLNKRLNHAVHDCGLDERGDK KPAWLCSGLIMRSTSHLSPWASASVAAHYFVRADTRTRHLMSGAGRGLILKPTADLGENWLKCIYPRDANSAWGEGGNYH RDHANFLCSDAATQMSQADLSSCSRVLGIRAGASAAQWTAAFLAKYPYRRNGEEALRQCSLSVHDASQFEAAIQVSATNL KASDDPWNELIVKPWQAADIPEIEAFFWSANSEGLFYDDDFLKAKEMAKKYVSPDGKPVPVVKVNLHANVVSLP >Mature_474_residues MEWKMSLFQRGGSRKLACLGWPIALLLGSGSGAFAHAGGDQALKDERPHLLRTAQDLSHGAFINKQARTEAAFDKNALMD AFQKRIPVHLDFFTPGASDHNLVSIYMSKDGVLFTREASPVFKGLNSHKAPVYGLLWVSDKEKAIFYVPSSQMSTGQNLD YALKLQATEEAAHHEAYPVFQLDTAGGEDIPQGALADKVISQASVPIRNPYAESADVVARLNKRLNHAVHDCGLDERGDK KPAWLCSGLIMRSTSHLSPWASASVAAHYFVRADTRTRHLMSGAGRGLILKPTADLGENWLKCIYPRDANSAWGEGGNYH RDHANFLCSDAATQMSQADLSSCSRVLGIRAGASAAQWTAAFLAKYPYRRNGEEALRQCSLSVHDASQFEAAIQVSATNL KASDDPWNELIVKPWQAADIPEIEAFFWSANSEGLFYDDDFLKAKEMAKKYVSPDGKPVPVVKVNLHANVVSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51898; Mature: 51898
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWKMSLFQRGGSRKLACLGWPIALLLGSGSGAFAHAGGDQALKDERPHLLRTAQDLSHG CCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHCCCCHHHHHHHHHHCC AFINKQARTEAAFDKNALMDAFQKRIPVHLDFFTPGASDHNLVSIYMSKDGVLFTREASP CEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCEEEEECCCH VFKGLNSHKAPVYGLLWVSDKEKAIFYVPSSQMSTGQNLDYALKLQATEEAAHHEAYPVF HHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHCCCCCCEE QLDTAGGEDIPQGALADKVISQASVPIRNPYAESADVVARLNKRLNHAVHDCGLDERGDK EEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC KPAWLCSGLIMRSTSHLSPWASASVAAHYFVRADTRTRHLMSGAGRGLILKPTADLGENW CHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCHHHHHHHCCCCCEEEECCHHHCCCH LKCIYPRDANSAWGEGGNYHRDHANFLCSDAATQMSQADLSSCSRVLGIRAGASAAQWTA HEEECCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AFLAKYPYRRNGEEALRQCSLSVHDASQFEAAIQVSATNLKASDDPWNELIVKPWQAADI HHHHHCCCCCCCHHHHHHHCCCCCCHHHHEEEEEEEECCCCCCCCCHHHHEECCCCCCCC PEIEAFFWSANSEGLFYDDDFLKAKEMAKKYVSPDGKPVPVVKVNLHANVVSLP CCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC >Mature Secondary Structure MEWKMSLFQRGGSRKLACLGWPIALLLGSGSGAFAHAGGDQALKDERPHLLRTAQDLSHG CCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCHHCCCCHHHHHHHHHHCC AFINKQARTEAAFDKNALMDAFQKRIPVHLDFFTPGASDHNLVSIYMSKDGVLFTREASP CEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCEEEEECCCH VFKGLNSHKAPVYGLLWVSDKEKAIFYVPSSQMSTGQNLDYALKLQATEEAAHHEAYPVF HHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHCCCCCCEE QLDTAGGEDIPQGALADKVISQASVPIRNPYAESADVVARLNKRLNHAVHDCGLDERGDK EEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC KPAWLCSGLIMRSTSHLSPWASASVAAHYFVRADTRTRHLMSGAGRGLILKPTADLGENW CHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCHHHHHHHCCCCCEEEECCHHHCCCH LKCIYPRDANSAWGEGGNYHRDHANFLCSDAATQMSQADLSSCSRVLGIRAGASAAQWTA HEEECCCCCCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AFLAKYPYRRNGEEALRQCSLSVHDASQFEAAIQVSATNLKASDDPWNELIVKPWQAADI HHHHHCCCCCCCHHHHHHHCCCCCCHHHHEEEEEEEECCCCCCCCCHHHHEECCCCCCCC PEIEAFFWSANSEGLFYDDDFLKAKEMAKKYVSPDGKPVPVVKVNLHANVVSLP CCEEEEEECCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA