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The map label for this gene is uidR [C]

Identifier: 34497839

GI number: 34497839

Start: 2566252

End: 2566896

Strand: Reverse

Name: uidR [C]

Synonym: CV_2384

Alternate gene names: 34497839

Gene position: 2566896-2566252 (Counterclockwise)

Preceding gene: 34497840

Following gene: 34497836

Centisome position: 54.03

GC content: 57.83

Gene sequence:

>645_bases
ATGAGTAAAACCAGAATCAAGACCTACGACCGCATCATTCAAGAAAGCCTGAAGCTGTTCAACGAGCAAGGCGAGCGCAG
CATCACCACCAACCACATCGCCGCGCATCTGGGCATCAGCCCGGGCAACCTCTACTACCACTTCCGCAACAAGGAAGAAA
TCGTCTACCAAATCTTCCTGATGTACCGCGAGTTCATCAATCAGCGGCTGTCCGTGCCGGAAGACCGCAAGATGACGGTC
GACGATCTGGTCAACTACCTGGACACCGCCTTCCTTGCCATGTGGCAGTTCCGCTTCATGTTCTATGACCTGCCCGGCCT
GCTCGCCCGCAACCCCCAGATGCAGTCCGAATACCACCAGTTCGTCAACACCGAGCTGAAGAACATTCTGGGCGAGCACT
TCCGCGAATTCATCCGTCTGGGACTGCTGAAAATGGACGAGGAAGACATCGAGCCGGTCAGCATCAACATCTGGCTGGTG
GTGAAGTTCTGGTTTGCCTTCGAGCAGACTTCCCGCCCCAAGGCGCCGATCACCGAAGAGTCCGGCCATCGCGGCGTGCT
GCAGGTGCTGGCCCTGCTGAAGCCCTATGTGCAGCCGGAATATCGCCACGCCTTCCACTCGCTGTACGAGCGGCACGGCG
GCTGA

Upstream 100 bases:

>100_bases
GTCGGATTGCTATCCCATTATTGAGCCATAAGAAATAGAGCAAGAACTCCAAACATCGTATACAATTGCGCTATGCGAAG
TCACTACCAGCCGGTGCTAA

Downstream 100 bases:

>100_bases
GCACAGGATTTTCCGCGCCAAACAGAAAGGCCACTGCATAGCAGTGGCCTTTTTCATTGCCGCCAGGGTGGCTTACGCCG
CCTCGGCAAGGTTCTGTGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSKTRIKTYDRIIQESLKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNKEEIVYQIFLMYREFINQRLSVPEDRKMTV
DDLVNYLDTAFLAMWQFRFMFYDLPGLLARNPQMQSEYHQFVNTELKNILGEHFREFIRLGLLKMDEEDIEPVSINIWLV
VKFWFAFEQTSRPKAPITEESGHRGVLQVLALLKPYVQPEYRHAFHSLYERHGG

Sequences:

>Translated_214_residues
MSKTRIKTYDRIIQESLKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNKEEIVYQIFLMYREFINQRLSVPEDRKMTV
DDLVNYLDTAFLAMWQFRFMFYDLPGLLARNPQMQSEYHQFVNTELKNILGEHFREFIRLGLLKMDEEDIEPVSINIWLV
VKFWFAFEQTSRPKAPITEESGHRGVLQVLALLKPYVQPEYRHAFHSLYERHGG
>Mature_213_residues
SKTRIKTYDRIIQESLKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNKEEIVYQIFLMYREFINQRLSVPEDRKMTVD
DLVNYLDTAFLAMWQFRFMFYDLPGLLARNPQMQSEYHQFVNTELKNILGEHFREFIRLGLLKMDEEDIEPVSINIWLVV
KFWFAFEQTSRPKAPITEESGHRGVLQVLALLKPYVQPEYRHAFHSLYERHGG

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25537; Mature: 25406

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTRIKTYDRIIQESLKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNKEEIVYQIFL
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
MYREFINQRLSVPEDRKMTVDDLVNYLDTAFLAMWQFRFMFYDLPGLLARNPQMQSEYHQ
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHH
FVNTELKNILGEHFREFIRLGLLKMDEEDIEPVSINIWLVVKFWFAFEQTSRPKAPITEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCC
SGHRGVLQVLALLKPYVQPEYRHAFHSLYERHGG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTRIKTYDRIIQESLKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNKEEIVYQIFL
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
MYREFINQRLSVPEDRKMTVDDLVNYLDTAFLAMWQFRFMFYDLPGLLARNPQMQSEYHQ
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHH
FVNTELKNILGEHFREFIRLGLLKMDEEDIEPVSINIWLVVKFWFAFEQTSRPKAPITEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCC
SGHRGVLQVLALLKPYVQPEYRHAFHSLYERHGG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA