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The map label for this gene is 34497840

Identifier: 34497840

GI number: 34497840

Start: 2566966

End: 2567811

Strand: Reverse

Name: 34497840

Synonym: CV_2385

Alternate gene names: NA

Gene position: 2567811-2566966 (Counterclockwise)

Preceding gene: 34497841

Following gene: 34497839

Centisome position: 54.05

GC content: 63.24

Gene sequence:

>846_bases
ATGCACACCCTGCTCGATCTGATCGCCTTCCTGCGGGAGAACTACGCGCACGAAATCACCCGCTCCCTGCTGCTGATCCT
GACGCTGGTGGTGATCCGCGTGGTGGTCGACCGGCTGCTGGCGGCCAACAGCGGGGTGCCGGTGGAGGAGCGCCGGCGCT
GGTCGATCAACACCCGCAACGGCCTGTTCCTGGCCGGCCTGGCCGGCATCGGACTGATCTGGGCCAATGAGCTGCAGACG
CTGGCCGTGTCCATGCTGGCCTTCGCCGCCGCGCTGATCCTGGCCACCAAGGAGCTGATCATGTGCCTGTCAGGCGGCGT
GGTGCGGCAGATGTCCAACAGCTACGGCCTGGGCGATCATATCGAAATAGGCGCGGTGCGCGGCCGGGTGGTGGACATCG
GCCTTCTGTCCACCACGGTGATGGAGATCGGCCCCAACCACAGCTCGCACCAGATGACCGGCCGCGCCCTCACCTTCCCC
AACAGCCTGCTGCTGTCCACGCCGGTGATCCGGGAAAACTACATGGGCGAATACGTGATGCACATCATCAACGTGCCGCT
CGCCTACACCGTTCCGCCAGCCCAGGCGGAACGCCTGCTGATGGAGGCCGCGGAAGAGACCTGCGATTGCCATGTAGACG
TGGCGCGGCGCCACATGGAGGACATGGCGAAGCGCTATCTGGTGGACATCCCGTCGGTGGAGCCGCGCATTTCGATCCAG
CCGGTCGATGAAAAGCGCTATCAGTTGATCCTGCGCATCGCGATTCCGGCCAGAGAGCGGCAACGTATCGAACAAGCCAT
CCTGCATAAGTTCATGTCGGATTGCTATCCCATTATTGAGCCATAA

Upstream 100 bases:

>100_bases
CCCAACCGCGTCAACCTGCAATTGACCCAGGAGCGCTGGCCGGACATCGTTTTCCACGAAACCCGCGAACACGCGGTGAA
GCTCAACGACTGAGGAGTCC

Downstream 100 bases:

>100_bases
GAAATAGAGCAAGAACTCCAAACATCGTATACAATTGCGCTATGCGAAGTCACTACCAGCCGGTGCTAAATGAGTAAAAC
CAGAATCAAGACCTACGACC

Product: integral membrane protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel MscS; Integral Membrane Protein; Transporter MscS Family; Mechanosensitive Ion Channel Protein MscS; Cation Efflux Protein; Membrane Associated Protein; MscS Mechanosensitive Ion Channel Protein; Mechanosensitive Ion Channel

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MHTLLDLIAFLRENYAHEITRSLLLILTLVVIRVVVDRLLAANSGVPVEERRRWSINTRNGLFLAGLAGIGLIWANELQT
LAVSMLAFAAALILATKELIMCLSGGVVRQMSNSYGLGDHIEIGAVRGRVVDIGLLSTTVMEIGPNHSSHQMTGRALTFP
NSLLLSTPVIRENYMGEYVMHIINVPLAYTVPPAQAERLLMEAAEETCDCHVDVARRHMEDMAKRYLVDIPSVEPRISIQ
PVDEKRYQLILRIAIPARERQRIEQAILHKFMSDCYPIIEP

Sequences:

>Translated_281_residues
MHTLLDLIAFLRENYAHEITRSLLLILTLVVIRVVVDRLLAANSGVPVEERRRWSINTRNGLFLAGLAGIGLIWANELQT
LAVSMLAFAAALILATKELIMCLSGGVVRQMSNSYGLGDHIEIGAVRGRVVDIGLLSTTVMEIGPNHSSHQMTGRALTFP
NSLLLSTPVIRENYMGEYVMHIINVPLAYTVPPAQAERLLMEAAEETCDCHVDVARRHMEDMAKRYLVDIPSVEPRISIQ
PVDEKRYQLILRIAIPARERQRIEQAILHKFMSDCYPIIEP
>Mature_281_residues
MHTLLDLIAFLRENYAHEITRSLLLILTLVVIRVVVDRLLAANSGVPVEERRRWSINTRNGLFLAGLAGIGLIWANELQT
LAVSMLAFAAALILATKELIMCLSGGVVRQMSNSYGLGDHIEIGAVRGRVVDIGLLSTTVMEIGPNHSSHQMTGRALTFP
NSLLLSTPVIRENYMGEYVMHIINVPLAYTVPPAQAERLLMEAAEETCDCHVDVARRHMEDMAKRYLVDIPSVEPRISIQ
PVDEKRYQLILRIAIPARERQRIEQAILHKFMSDCYPIIEP

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31469; Mature: 31469

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLLDLIAFLRENYAHEITRSLLLILTLVVIRVVVDRLLAANSGVPVEERRRWSINTRN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
GLFLAGLAGIGLIWANELQTLAVSMLAFAAALILATKELIMCLSGGVVRQMSNSYGLGDH
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
IEIGAVRGRVVDIGLLSTTVMEIGPNHSSHQMTGRALTFPNSLLLSTPVIRENYMGEYVM
EEEEEECCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHCCCHHHHHHHHHHHH
HIINVPLAYTVPPAQAERLLMEAAEETCDCHVDVARRHMEDMAKRYLVDIPSVEPRISIQ
HHHCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
PVDEKRYQLILRIAIPARERQRIEQAILHKFMSDCYPIIEP
CCCHHHHHEEHHEECCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHTLLDLIAFLRENYAHEITRSLLLILTLVVIRVVVDRLLAANSGVPVEERRRWSINTRN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
GLFLAGLAGIGLIWANELQTLAVSMLAFAAALILATKELIMCLSGGVVRQMSNSYGLGDH
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
IEIGAVRGRVVDIGLLSTTVMEIGPNHSSHQMTGRALTFPNSLLLSTPVIRENYMGEYVM
EEEEEECCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHCCCHHHHHHHHHHHH
HIINVPLAYTVPPAQAERLLMEAAEETCDCHVDVARRHMEDMAKRYLVDIPSVEPRISIQ
HHHCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
PVDEKRYQLILRIAIPARERQRIEQAILHKFMSDCYPIIEP
CCCHHHHHEEHHEECCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA