| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497838
Identifier: 34497838
GI number: 34497838
Start: 2565826
End: 2566179
Strand: Direct
Name: 34497838
Synonym: CV_2383
Alternate gene names: NA
Gene position: 2565826-2566179 (Clockwise)
Preceding gene: 34497837
Following gene: 34497842
Centisome position: 54.01
GC content: 60.17
Gene sequence:
>354_bases ATGACTGCGACTTTTCCTGAAGTGCTGGTTCCGCAGGCTCTTTCTGCGGGTGCTTTCGACGCGGACGACGCAGATGTCCG CAACAACCTGGGCCTGCTGGGCCTGCTCGACGTGCATTCCCGCGATGGCCGTTATCATTTGACGGTGTCGCTGGAGCCGG TGGGCTCGGATCTTCAGCCTGCGTTGTGGACGCTGGAAGTTGAAATGGAAGTATGCGCCGAAGCCAAGGTTGCGCATTGC AAGCTCGGCCAGGTGGAGTACGTGGGCAATGCGCCGGGCAGCCATCTGCGCAAAATGCTCGCCAACGGCGAGTTGCTCGC TTATCTGACACAGAACCTTGCCGAGGCGGCGTAA
Upstream 100 bases:
>100_bases CAGACATCAATGAATGTCTGATCGCAAACCATTCAGATGGCGCGCGATGACAATAATCCAATAGTTCGTTTTTTGAGGGG AAACCCTCGGGGTAGATGCC
Downstream 100 bases:
>100_bases GCCACCCTGGCGGCAATGAAAAAGGCCACTGCTATGCAGTGGCCTTTCTGTTTGGCGCGGAAAATCCTGTGCTCAGCCGC CGTGCCGCTCGTACAGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTATFPEVLVPQALSAGAFDADDADVRNNLGLLGLLDVHSRDGRYHLTVSLEPVGSDLQPALWTLEVEMEVCAEAKVAHC KLGQVEYVGNAPGSHLRKMLANGELLAYLTQNLAEAA
Sequences:
>Translated_117_residues MTATFPEVLVPQALSAGAFDADDADVRNNLGLLGLLDVHSRDGRYHLTVSLEPVGSDLQPALWTLEVEMEVCAEAKVAHC KLGQVEYVGNAPGSHLRKMLANGELLAYLTQNLAEAA >Mature_116_residues TATFPEVLVPQALSAGAFDADDADVRNNLGLLGLLDVHSRDGRYHLTVSLEPVGSDLQPALWTLEVEMEVCAEAKVAHCK LGQVEYVGNAPGSHLRKMLANGELLAYLTQNLAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12514; Mature: 12383
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATFPEVLVPQALSAGAFDADDADVRNNLGLLGLLDVHSRDGRYHLTVSLEPVGSDLQP CCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC ALWTLEVEMEVCAEAKVAHCKLGQVEYVGNAPGSHLRKMLANGELLAYLTQNLAEAA EEEEEEEHHHHHCCCHHCEECCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure TATFPEVLVPQALSAGAFDADDADVRNNLGLLGLLDVHSRDGRYHLTVSLEPVGSDLQP CCCCCHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC ALWTLEVEMEVCAEAKVAHCKLGQVEYVGNAPGSHLRKMLANGELLAYLTQNLAEAA EEEEEEEHHHHHCCCHHCEECCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA