| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497773
Identifier: 34497773
GI number: 34497773
Start: 2509992
End: 2510513
Strand: Direct
Name: 34497773
Synonym: CV_2318
Alternate gene names: NA
Gene position: 2509992-2510513 (Clockwise)
Preceding gene: 34497771
Following gene: 34497784
Centisome position: 52.83
GC content: 53.83
Gene sequence:
>522_bases CTGGGCAGTGTTCTTTTTCAAGCCACGGTAGCGTGTTTTAAGGTGTCCGAACTGCCGTTTGATGACCCGGAAAGGATGCT CGACTTTGGCCCGAATCTTGGCTTTGACCGTTTCGACCCGACTAATCTGCTGGTTATCCGCAGAATCGGTCAGCATTTTG CGCTGGCCGGGCCTAATGGCGATCCCCCAGCGTACCACTTGCGATTTCTATTTCACACGTTTGTGCACGTCTGTCAAGTC TGCATCGCTAAAGACATCGACTTCCTCGCCGTGCAGCAACTGATTGGCCATCGTGACATCTGCCACATTGGCGGCGGTGC CAGCCACGTGATGCACCAGGCGGGATGGGCATCGACCCCATATGGGCTTTCATGCCGAAGTACCACTGATTGCCCTTCTT GGTTTGATGCATGTCCGGATCGTGTTCACTCTGGGCGTTCTTGCTGGGACTGGGCACGTGGATCAGGTTGGCAAATGATG TTTTGCGTCAATATCAGTCCCTTGTCGGATAAATGCTGGTGA
Upstream 100 bases:
>100_bases TGAGGATGACCGGATTCCTTCGATCATCTCCCTTTCAACCACGCGCCAGCAAGGTCTTTCGTACTAGTCAGATGTTGGCC GTTCAGAACAATGTCATCGA
Downstream 100 bases:
>100_bases ATGGCGGCAAACAGTGTATGGGTCAGTCGATGTCTTTCCTGCAGGTGGCGCAAGTTCAGCAAGGTGGTTTCATCTGGAGT GGCGTCTAGAGAGAGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGSVLFQATVACFKVSELPFDDPERMLDFGPNLGFDRFDPTNLLVIRRIGQHFALAGPNGDPPAYHLRFLFHTFVHVCQV CIAKDIDFLAVQQLIGHRDICHIGGGASHVMHQAGWASTPYGLSCRSTTDCPSWFDACPDRVHSGRSCWDWARGSGWQMM FCVNISPLSDKCW
Sequences:
>Translated_173_residues MGSVLFQATVACFKVSELPFDDPERMLDFGPNLGFDRFDPTNLLVIRRIGQHFALAGPNGDPPAYHLRFLFHTFVHVCQV CIAKDIDFLAVQQLIGHRDICHIGGGASHVMHQAGWASTPYGLSCRSTTDCPSWFDACPDRVHSGRSCWDWARGSGWQMM FCVNISPLSDKCW >Mature_172_residues GSVLFQATVACFKVSELPFDDPERMLDFGPNLGFDRFDPTNLLVIRRIGQHFALAGPNGDPPAYHLRFLFHTFVHVCQVC IAKDIDFLAVQQLIGHRDICHIGGGASHVMHQAGWASTPYGLSCRSTTDCPSWFDACPDRVHSGRSCWDWARGSGWQMMF CVNISPLSDKCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19361; Mature: 19230
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVLFQATVACFKVSELPFDDPERMLDFGPNLGFDRFDPTNLLVIRRIGQHFALAGPNG CCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCC DPPAYHLRFLFHTFVHVCQVCIAKDIDFLAVQQLIGHRDICHIGGGASHVMHQAGWASTP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCC YGLSCRSTTDCPSWFDACPDRVHSGRSCWDWARGSGWQMMFCVNISPLSDKCW CCCCCCCCCCCCHHHHHCHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure GSVLFQATVACFKVSELPFDDPERMLDFGPNLGFDRFDPTNLLVIRRIGQHFALAGPNG CCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCC DPPAYHLRFLFHTFVHVCQVCIAKDIDFLAVQQLIGHRDICHIGGGASHVMHQAGWASTP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCC YGLSCRSTTDCPSWFDACPDRVHSGRSCWDWARGSGWQMMFCVNISPLSDKCW CCCCCCCCCCCCHHHHHCHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA