| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is cysN
Identifier: 34497762
GI number: 34497762
Start: 2497319
End: 2498752
Strand: Direct
Name: cysN
Synonym: CV_2307
Alternate gene names: 34497762
Gene position: 2497319-2498752 (Clockwise)
Preceding gene: 34497761
Following gene: 34497764
Centisome position: 52.56
GC content: 65.34
Gene sequence:
>1434_bases ATGTCGCACCAATCCGAACTGATCGCCGGGGATATCCTGGAATACCTGAGCCAGCATGAGAACAAGGACATGCTGCGCTT CATCACCTGCGGCAGCGTGGACGACGGCAAGTCCACGCTGATCGGCCGGCTGCTGCACGACTCCAAGCTGATTTTCGAGG ACCAGCTGGCGGCGATCGAGCGCGACTCGAAAAAATACAACACCACCGACCAGGACATCGACTTGGCGCTGCTGGTGGAC GGCCTGCAGGCCGAGCGCGAGCAGGGCATTACCATAGACGTCGCCTACCGCTACTTCAGCACCGACAAGCGCAAGTTCAT CATCGCCGATTGCCCAGGCCACGAGCAGTACACCCGCAACATGGCCACCGGCGCGTCCACCAGCAATCTGGCCATCATCC TGATCGACGCGCGGCGCGGCGTGCAGACGCAAACCCGCCGCCATAGCTACATCGTCAGCCTGCTGGGCATCCGCCACGTG ATCGTCGCGGTCAACAAGATGGACCTGGTGGATTACAGCGAGGACGTCTACAACCGCATCCGCGACGAATACCTGACCTT CGCCGAGCATCTGGACATCCCTGACATCCATTTCGTGCCGATCTCCGCGCTGCGCGGCGACAACGTGGTCAGCCGCACCG AGGCGGCGCCGTGGTACCAGGGCGCGACGCTGATGCACTTGCTGGAAACGGTGCAGATCAGCCACGATGCGCCTTTGTCC GCCTTCCGCCTGCCGGTGCAATACGTGAACCGGCCGAATCTGGACTTCCGCGGCTTCTGCGGCACCATCGCCAGCGGTGC CGTGCATCCGGGGGATGCTGTCGTGGCGCTGCCGTCGGGCAAGGAGAGCCGGGTCAAGGAGATCGTCACTTTCGACGGCA GCCTGTCCCGCGCCGGAGCCGGCCAGGCGGTCACGCTGACGCTGGAGGACGAAATCGACATCTCCCGCGGCGACATGCTG GTGCGCGCCGACGAGGCGCGGCCGCACGTGTCGCGCAGCTTCGACGCCCACCTGGTGGCGATGGGCGAGGCGCCGCTGCG GCCGGGCAAGGAATACGGCTTCAAGCTGGCCGGCAAGTATGTGACCGGACGCATCGAAGCCATCCTGCATCGGACCGACG TCAACACGCTGCAGGACAGTCCGGCCGACGCGCTGGCGCTGAACGAGATCGGCCTGTGCCGGATTTCGCTGAACAGCCCG GCCGCGTTCGACGCATACCGCGACTGCCGCGGCAGCGGCAGCCTGATCCTGATCGACAGGCTGAGCAACGGCACGGTAGC CGCAGGCATGATCGTCGCGCAAAGCGAAGAGGCGTCGCCGGCCGCGCTGTCGCCATGGGCGTTGTTCGAGCAGGAGCTGG ACCAGCTGCTGCAGCGCTACTTCCCGCAGATGACGCGCGCTGAACTGGCGCGGCGCTTGCGGGACGAGCTCTGA
Upstream 100 bases:
>100_bases AGGAAATGCTGCTGACGAGGACTTCCGAGCGGCAGGGCCGGCTGATCGACCATGACAGCGCCGGCTCGATGGAAAAGAAG AAAATGGAAGGGTATTTCTG
Downstream 100 bases:
>100_bases TTCCTCTCCCCGCAACAGCCCCGATTCCGGGGCTGTTTCTTTTCCGGTGCTTGGACGCCCGCTCAGAATCGGTCCTGGCC GATGACGCTGCGCAGATTGT
Product: sulfate adenylyltransferase subunit 1
Products: NA
Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSHQSELIAGDILEYLSQHENKDMLRFITCGSVDDGKSTLIGRLLHDSKLIFEDQLAAIERDSKKYNTTDQDIDLALLVD GLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRGVQTQTRRHSYIVSLLGIRHV IVAVNKMDLVDYSEDVYNRIRDEYLTFAEHLDIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLS AFRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESRVKEIVTFDGSLSRAGAGQAVTLTLEDEIDISRGDML VRADEARPHVSRSFDAHLVAMGEAPLRPGKEYGFKLAGKYVTGRIEAILHRTDVNTLQDSPADALALNEIGLCRISLNSP AAFDAYRDCRGSGSLILIDRLSNGTVAAGMIVAQSEEASPAALSPWALFEQELDQLLQRYFPQMTRAELARRLRDEL
Sequences:
>Translated_477_residues MSHQSELIAGDILEYLSQHENKDMLRFITCGSVDDGKSTLIGRLLHDSKLIFEDQLAAIERDSKKYNTTDQDIDLALLVD GLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRGVQTQTRRHSYIVSLLGIRHV IVAVNKMDLVDYSEDVYNRIRDEYLTFAEHLDIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLS AFRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESRVKEIVTFDGSLSRAGAGQAVTLTLEDEIDISRGDML VRADEARPHVSRSFDAHLVAMGEAPLRPGKEYGFKLAGKYVTGRIEAILHRTDVNTLQDSPADALALNEIGLCRISLNSP AAFDAYRDCRGSGSLILIDRLSNGTVAAGMIVAQSEEASPAALSPWALFEQELDQLLQRYFPQMTRAELARRLRDEL >Mature_476_residues SHQSELIAGDILEYLSQHENKDMLRFITCGSVDDGKSTLIGRLLHDSKLIFEDQLAAIERDSKKYNTTDQDIDLALLVDG LQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRGVQTQTRRHSYIVSLLGIRHVI VAVNKMDLVDYSEDVYNRIRDEYLTFAEHLDIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLSA FRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESRVKEIVTFDGSLSRAGAGQAVTLTLEDEIDISRGDMLV RADEARPHVSRSFDAHLVAMGEAPLRPGKEYGFKLAGKYVTGRIEAILHRTDVNTLQDSPADALALNEIGLCRISLNSPA AFDAYRDCRGSGSLILIDRLSNGTVAAGMIVAQSEEASPAALSPWALFEQELDQLLQRYFPQMTRAELARRLRDEL
Specific function: May be the GTPase, regulating ATP sulfurylase activity
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily
Homologues:
Organism=Homo sapiens, GI223555963, Length=439, Percent_Identity=28.9293849658314, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI5729864, Length=439, Percent_Identity=28.9293849658314, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI194097354, Length=334, Percent_Identity=29.940119760479, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI194018520, Length=334, Percent_Identity=29.940119760479, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI194018522, Length=337, Percent_Identity=29.673590504451, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI46094014, Length=338, Percent_Identity=29.8816568047337, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI4503471, Length=463, Percent_Identity=27.4298056155508, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI4503475, Length=475, Percent_Identity=26.5263157894737, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI34147630, Length=316, Percent_Identity=31.6455696202532, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI157426893, Length=280, Percent_Identity=25, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI1789108, Length=456, Percent_Identity=58.3333333333333, Blast_Score=527, Evalue=1e-151, Organism=Escherichia coli, GI1790412, Length=353, Percent_Identity=26.628895184136, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789737, Length=353, Percent_Identity=26.628895184136, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI2367247, Length=296, Percent_Identity=27.3648648648649, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115532067, Length=431, Percent_Identity=29.4663573085847, Blast_Score=167, Evalue=8e-42, Organism=Caenorhabditis elegans, GI115532065, Length=431, Percent_Identity=29.4663573085847, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI32566629, Length=436, Percent_Identity=26.605504587156, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17552884, Length=350, Percent_Identity=29.1428571428571, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17569207, Length=350, Percent_Identity=29.1428571428571, Blast_Score=144, Evalue=7e-35, Organism=Caenorhabditis elegans, GI32566303, Length=343, Percent_Identity=27.4052478134111, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI32566301, Length=149, Percent_Identity=30.8724832214765, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25141371, Length=93, Percent_Identity=34.4086021505376, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17556456, Length=195, Percent_Identity=32.8205128205128, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6325337, Length=446, Percent_Identity=28.2511210762332, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319594, Length=446, Percent_Identity=28.2511210762332, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322937, Length=383, Percent_Identity=29.5039164490862, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6320377, Length=440, Percent_Identity=27.5, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6324761, Length=146, Percent_Identity=36.3013698630137, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323320, Length=345, Percent_Identity=25.5072463768116, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45550900, Length=433, Percent_Identity=27.4826789838337, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI17137380, Length=339, Percent_Identity=27.7286135693215, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24652838, Length=347, Percent_Identity=28.2420749279539, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI17137572, Length=347, Percent_Identity=28.2420749279539, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI45553807, Length=350, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI45553816, Length=350, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24651721, Length=350, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI17864154, Length=350, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI281363316, Length=276, Percent_Identity=28.6231884057971, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI17864358, Length=276, Percent_Identity=28.6231884057971, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI19921738, Length=288, Percent_Identity=29.8611111111111, Blast_Score=86, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSN_CHRVO (Q7NVN5)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901977.1 - ProteinModelPortal: Q7NVN5 - SMR: Q7NVN5 - GeneID: 2549880 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_2307 - NMPDR: fig|243365.1.peg.2307 - HOGENOM: HBG307581 - OMA: KELFFDP - PhylomeDB: Q7NVN5 - ProtClustDB: CLSK2485475 - BioCyc: CVIO243365:CV_2307-MONOMER - BRENDA: 2.7.7.4 - HAMAP: MF_00062 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 - PRINTS: PR00315 - TIGRFAMs: TIGR02034
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; SSF50465 Elong_init_C; SSF50447 Translat_factor
EC number: =2.7.7.4
Molecular weight: Translated: 52841; Mature: 52710
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00301 EFACTOR_GTP; PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQSELIAGDILEYLSQHENKDMLRFITCGSVDDGKSTLIGRLLHDSKLIFEDQLAAIE CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHH RDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRN CCCCCCCCCCCCCEEEEEECCHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH MATGASTSNLAIILIDARRGVQTQTRRHSYIVSLLGIRHVIVAVNKMDLVDYSEDVYNRI HHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHH RDEYLTFAEHLDIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLS HHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHH AFRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESRVKEIVTFDGSLSRAGA HHCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHEEECCCCCCCCC GQAVTLTLEDEIDISRGDMLVRADEARPHVSRSFDAHLVAMGEAPLRPGKEYGFKLAGKY CCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHCCEEEECHH VTGRIEAILHRTDVNTLQDSPADALALNEIGLCRISLNSPAAFDAYRDCRGSGSLILIDR HHHHEEEHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHCCCCCCEEEEEE LSNGTVAAGMIVAQSEEASPAALSPWALFEQELDQLLQRYFPQMTRAELARRLRDEL CCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure SHQSELIAGDILEYLSQHENKDMLRFITCGSVDDGKSTLIGRLLHDSKLIFEDQLAAIE CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHH RDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRN CCCCCCCCCCCCCEEEEEECCHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHH MATGASTSNLAIILIDARRGVQTQTRRHSYIVSLLGIRHVIVAVNKMDLVDYSEDVYNRI HHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHH RDEYLTFAEHLDIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLS HHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHH AFRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESRVKEIVTFDGSLSRAGA HHCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHEEECCCCCCCCC GQAVTLTLEDEIDISRGDMLVRADEARPHVSRSFDAHLVAMGEAPLRPGKEYGFKLAGKY CCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHCCEEEECHH VTGRIEAILHRTDVNTLQDSPADALALNEIGLCRISLNSPAAFDAYRDCRGSGSLILIDR HHHHEEEHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHCCCCCCEEEEEE LSNGTVAAGMIVAQSEEASPAALSPWALFEQELDQLLQRYFPQMTRAELARRLRDEL CCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782