| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cysD
Identifier: 34497761
GI number: 34497761
Start: 2496393
End: 2497319
Strand: Direct
Name: cysD
Synonym: CV_2306
Alternate gene names: 34497761
Gene position: 2496393-2497319 (Clockwise)
Preceding gene: 34497756
Following gene: 34497762
Centisome position: 52.54
GC content: 61.38
Gene sequence:
>927_bases ATGGATATCGATCAAGCAAGGCTGACCCATCTCCAGCAATTGGAGGCGGAGTCCATCCACATCATCCGCGAGGTGGCGGC GGAATTCGAGAACCCGGTGATGCTGTACTCCATCGGCAAGGATTCCGCGGTGATGCTGCACCTGGCGAAGAAGGCTTTCT ACCCGGGCAAGCCGCCGTTCCCGCTGATGCACGTCGATACCACCTGGAAATTCCGCGACATGATCGCGCTGCGCGACAAG CAGGCGAAGGAAAACGGCTGGGATCTGATCGTCCACGTCAATCAGGACGGCGTGGAGGCCGGCATCAATCCGTTCACCGC CGGCAGCGCCAAGCATACCGACGTGATGAAGACCGAGGGCCTGAAGCAGGCGCTGAACCGGCACAAGTTCGACGCGGCTT TCGGCGGCGCGCGGCGCGACGAGGAGAAAAGCCGCGCCAAGGAGCGCGTCTACTCCTTCCGCGACAAGAACCACCGCTGG GATCCGAAAAACCAGCGGCCGGAGCTGTGGAACATCTACAACGGCAGGATCGACAAGGGCGAGAGCATTCGCGTGTTCCC GCTGTCCAACTGGACCGAGCTGGACATCTGGCAATACATCTACCTGGAGAACATCGAGATCGTGCCCTTGTATTTCGCCG CCGAACGCCCGGTGGTGGAGCGCGACGGCATGCTGATCATGATCGACGACGAGCGCATCCTCGAATACCTGACCCCGGAG GAGAAGGCGAGCATCCAGACCCGCAAGGTGCGTTTCCGCACGCTGGGCTGTTACCCGCTGACCGGCGCGGTGGAGTCGGA GGCCGCCACGCTGCCGGAGATCATCCAGGAAATGCTGCTGACGAGGACTTCCGAGCGGCAGGGCCGGCTGATCGACCATG ACAGCGCCGGCTCGATGGAAAAGAAGAAAATGGAAGGGTATTTCTGA
Upstream 100 bases:
>100_bases TTTTAAGATTTGCTAAGTTTATATGGATATATCCAATCGGTTTTGAATACGCGCGAACATTTCCGGTAGATTGGCTGCAA TCATAGAACAGGCTGCAAGC
Downstream 100 bases:
>100_bases TGTCGCACCAATCCGAACTGATCGCCGGGGATATCCTGGAATACCTGAGCCAGCATGAGAACAAGGACATGCTGCGCTTC ATCACCTGCGGCAGCGTGGA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MDIDQARLTHLQQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLAKKAFYPGKPPFPLMHVDTTWKFRDMIALRDK QAKENGWDLIVHVNQDGVEAGINPFTAGSAKHTDVMKTEGLKQALNRHKFDAAFGGARRDEEKSRAKERVYSFRDKNHRW DPKNQRPELWNIYNGRIDKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYFAAERPVVERDGMLIMIDDERILEYLTPE EKASIQTRKVRFRTLGCYPLTGAVESEAATLPEIIQEMLLTRTSERQGRLIDHDSAGSMEKKKMEGYF
Sequences:
>Translated_308_residues MDIDQARLTHLQQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLAKKAFYPGKPPFPLMHVDTTWKFRDMIALRDK QAKENGWDLIVHVNQDGVEAGINPFTAGSAKHTDVMKTEGLKQALNRHKFDAAFGGARRDEEKSRAKERVYSFRDKNHRW DPKNQRPELWNIYNGRIDKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYFAAERPVVERDGMLIMIDDERILEYLTPE EKASIQTRKVRFRTLGCYPLTGAVESEAATLPEIIQEMLLTRTSERQGRLIDHDSAGSMEKKKMEGYF >Mature_308_residues MDIDQARLTHLQQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLAKKAFYPGKPPFPLMHVDTTWKFRDMIALRDK QAKENGWDLIVHVNQDGVEAGINPFTAGSAKHTDVMKTEGLKQALNRHKFDAAFGGARRDEEKSRAKERVYSFRDKNHRW DPKNQRPELWNIYNGRIDKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYFAAERPVVERDGMLIMIDDERILEYLTPE EKASIQTRKVRFRTLGCYPLTGAVESEAATLPEIIQEMLLTRTSERQGRLIDHDSAGSMEKKKMEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily
Homologues:
Organism=Escherichia coli, GI1789109, Length=306, Percent_Identity=77.124183006536, Blast_Score=486, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSD_CHRVO (Q7NVN6)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901976.1 - HSSP: Q87WW0 - ProteinModelPortal: Q7NVN6 - SMR: Q7NVN6 - GeneID: 2549874 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_2306 - NMPDR: fig|243365.1.peg.2306 - HOGENOM: HBG758022 - OMA: HYGFDAA - PhylomeDB: Q7NVN6 - ProtClustDB: PRK05253 - BioCyc: CVIO243365:CV_2306-MONOMER - BRENDA: 2.7.7.4 - HAMAP: MF_00064 - InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 - Gene3D: G3DSA:3.40.50.620 - PIRSF: PIRSF002936 - TIGRFAMs: TIGR02039
Pfam domain/function: PF01507 PAPS_reduct
EC number: =2.7.7.4
Molecular weight: Translated: 35697; Mature: 35697
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDQARLTHLQQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLAKKAFYPGKPPF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHEEHHHHCCCCCCCC PLMHVDTTWKFRDMIALRDKQAKENGWDLIVHVNQDGVEAGINPFTAGSAKHTDVMKTEG CEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHH LKQALNRHKFDAAFGGARRDEEKSRAKERVYSFRDKNHRWDPKNQRPELWNIYNGRIDKG HHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC ESIRVFPLSNWTELDIWQYIYLENIEIVPLYFAAERPVVERDGMLIMIDDERILEYLTPE CCEEEEECCCCCCHHHEEEEEECCEEEEEEEEECCCCEEECCCEEEEECCHHHHHHCCCC EKASIQTRKVRFRTLGCYPLTGAVESEAATLPEIIQEMLLTRTSERQGRLIDHDSAGSME HHHCHHHEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCH KKKMEGYF HHHHCCCC >Mature Secondary Structure MDIDQARLTHLQQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLAKKAFYPGKPPF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHEEHHHHCCCCCCCC PLMHVDTTWKFRDMIALRDKQAKENGWDLIVHVNQDGVEAGINPFTAGSAKHTDVMKTEG CEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHH LKQALNRHKFDAAFGGARRDEEKSRAKERVYSFRDKNHRWDPKNQRPELWNIYNGRIDKG HHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC ESIRVFPLSNWTELDIWQYIYLENIEIVPLYFAAERPVVERDGMLIMIDDERILEYLTPE CCEEEEECCCCCCHHHEEEEEECCEEEEEEEEECCCCEEECCCEEEEECCHHHHHHCCCC EKASIQTRKVRFRTLGCYPLTGAVESEAATLPEIIQEMLLTRTSERQGRLIDHDSAGSME HHHCHHHEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCH KKKMEGYF HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782