| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497720
Identifier: 34497720
GI number: 34497720
Start: 2453995
End: 2455713
Strand: Direct
Name: 34497720
Synonym: CV_2265
Alternate gene names: NA
Gene position: 2453995-2455713 (Clockwise)
Preceding gene: 34497719
Following gene: 34497721
Centisome position: 51.65
GC content: 65.62
Gene sequence:
>1719_bases ATGGCGTGTGCAAACCTGGATGCGGCCCGTTGCCTGCGGCGCGGCGCCGTCGGTGAGAGGATGCCAGGGTGCATCCAAGG CGGATTCGGATCGGTCTTATATCGGCATGCCTCCATTTTTCGGCATCCCAATGTCCTTTATCTTGCCGGTTTGAAAACTG TGGGCAAGCTCTCGCGCCGCGCCAGGCCGCGCGGCTTGCCGCGACCTTTCCATCGCCGAGGATCGCTTATGCCGTTGTTG GATGCCAGGCTGGGTTGGAGTTGCGCGCGCCTGATCGCGCGCGGTTTGTTCATCTTGCAGCTTGGGGGCTGGCCGGCGAT CGGCATCGCCGCCGGGCGGCCTGCCGAATGCGTGCCGGGCGAAGGCAAGAGTCCGCCATGGCTGGCCTCCCTCGACATCC AGGGGCGGAACGCTTTGACGAGCGCGCAATGGTACCGGGACTGGCTGGCTGTGACGGCTGATCTGTGCACCGATGTCCGC CATGCGGACCGCGACAATCCGGGCGTGAAAATCGTCTGGCGCGGATCCGGCGATGCGGACAAGAAGCTGTTGTTTTATGG CGCGGGCAACCATCATTACGAACCGGCAGCGGTATTTGACGAGGGGTTGCAGGTGATCAAGGCCGATGGCAGCCTGAAAA TCCGCCCCGGAACCGGGCAGTCCACAGCCAGCGCGCTCAAGAGTTCGTCGTTCTCATATGCTCTGGCCGAACGATTCGCG CTGGTCAGCCACGATGAGCGGCATTATGTCTACGCGATCAACGCGCCCGGCGGCATCGCGGTGGACGAGTCGCTGGGAAG CGAGGGGACCGGCAATGAGGAGGAAATCGCCTTTCCCGGCGGGGTGCAGTCCCGCTTCGTCAAAGGGATGTTCGAAAACC GACTGGTTTATGGCGAGCCGGGGCGAACGCCCTACGTGGAAACCTTGGCGTACACGCCGAATCCGCGCTACGGGCAAGGC GCCAAAGGCGCGGGAGACGGCGAGGTGGATGTGCTGGTTTCTTCCCGGGAGGCGGTGGATGTTTTGGGCGGTGGCCGGGC CGTGGATGCCTCCACCTGGCGTTTCCCGGCCACGGATGGCCGCGGCGCGGCGACCCAGGCGCAGTTGAGCACGCATGACG GCTCCGCCGCGCTGTGGGCGACGACCGGGCACCGGCAGCCGAGGTTCCCGCCAGAGGCGGGGTACCGCTGCGCGCTGGTG GACACCGCCCTGGAGCGGAACCATGCGCTGGCGGTGACCCGGACGCCGGTTCTGGAAGTGGCTACGCCAAGACGGCGCGC GGGCACTTGCGTCTATTTGTCCGATCGGGATGTGGCCGTGCGCGACGCCGGGGCGGAGGCCACCCGCGGTGCGGATCATT ACTGGACGCGATTGAGCGTGCACTGGAACAGTCCGGCGGACCTGGCCCGGGTGCGGGGATACCGGATTTACTGGACGGAC ATCTACGGCAATCCCGTCCAGATCGTGGGCGACATTCTCGATCCCAACGCCACCCGCTACGCGGTTTCGGAGAACATGGG CCGCAAGCTGGGGCTGAGGGACCACGTGGATGGGCTGATTCCCGTGTATCTGGACATTTACACCGTCATGGAAGGCGCGC CGGAAGCGGAGTCGTTCTCGCCGGTCCAGGTAAAGGTCAATGTGGCGCCGGCTCGGTTCAACCCCATCCGCCGGATTGCC GGCGCGTCTTCGCCGGCGGCTGGGAGCCGCGGGCAATGA
Upstream 100 bases:
>100_bases CAGTGCCCGGACGCTGCTGATCCACGGAGTAGCGGATCATGACGTGCTCTTCATGGAGTACGCCAGATAAGGCCTGTGAC TGGGCCTTTCTCCAGCGGGC
Downstream 100 bases:
>100_bases AACACAGCGCATTGGCCTGGGCGGTTCCCATTTTGATCGGCGCGATGGCCGCGTGAGTTGCCACGACGGCGTCCAGACAG CTGCCGGTCATGGCTTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRRARPRGLPRPFHRRGSLMPLL DARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPGEGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVR HADRDNPGVKIVWRGSGDADKKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEPGRTPYVETLAYTPNPRYGQG AKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDGRGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALV DTALERNHALAVTRTPVLEVATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFSPVQVKVNVAPARFNPIRRIA GASSPAAGSRGQ
Sequences:
>Translated_572_residues MACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRRARPRGLPRPFHRRGSLMPLL DARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPGEGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVR HADRDNPGVKIVWRGSGDADKKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEPGRTPYVETLAYTPNPRYGQG AKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDGRGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALV DTALERNHALAVTRTPVLEVATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFSPVQVKVNVAPARFNPIRRIA GASSPAAGSRGQ >Mature_571_residues ACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRRARPRGLPRPFHRRGSLMPLLD ARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPGEGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVRH ADRDNPGVKIVWRGSGDADKKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFAL VSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEPGRTPYVETLAYTPNPRYGQGA KGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDGRGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALVD TALERNHALAVTRTPVLEVATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTDI YGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFSPVQVKVNVAPARFNPIRRIAG ASSPAAGSRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61735; Mature: 61604
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRR CCCCCCHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH ARPRGLPRPFHRRGSLMPLLDARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPG CCCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCC EGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVRHADRDNPGVKIVWRGSGDAD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC KKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA CEEEEEECCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHH LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEP HCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCEEECCC GRTPYVETLAYTPNPRYGQGAKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDG CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEECCCCEECCCCCC RGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALVDTALERNHALAVTRTPVLEV CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEECCCEEEE ATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD CCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCEEEEEEE IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFS CCCCHHHEEEECCCCCCCEEEHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCC PVQVKVNVAPARFNPIRRIAGASSPAAGSRGQ CEEEEEEECCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ACANLDAARCLRRGAVGERMPGCIQGGFGSVLYRHASIFRHPNVLYLAGLKTVGKLSRR CCCCCHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH ARPRGLPRPFHRRGSLMPLLDARLGWSCARLIARGLFILQLGGWPAIGIAAGRPAECVPG CCCCCCCCCHHHCCCCCHHHHHHCCHHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCC EGKSPPWLASLDIQGRNALTSAQWYRDWLAVTADLCTDVRHADRDNPGVKIVWRGSGDAD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC KKLLFYGAGNHHYEPAAVFDEGLQVIKADGSLKIRPGTGQSTASALKSSSFSYALAERFA CEEEEEECCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHH LVSHDERHYVYAINAPGGIAVDESLGSEGTGNEEEIAFPGGVQSRFVKGMFENRLVYGEP HCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCEEECCC GRTPYVETLAYTPNPRYGQGAKGAGDGEVDVLVSSREAVDVLGGGRAVDASTWRFPATDG CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEECCCCEECCCCCC RGAATQAQLSTHDGSAALWATTGHRQPRFPPEAGYRCALVDTALERNHALAVTRTPVLEV CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEECCCEEEE ATPRRRAGTCVYLSDRDVAVRDAGAEATRGADHYWTRLSVHWNSPADLARVRGYRIYWTD CCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHCCEEEEEEE IYGNPVQIVGDILDPNATRYAVSENMGRKLGLRDHVDGLIPVYLDIYTVMEGAPEAESFS CCCCHHHEEEECCCCCCCEEEHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCC PVQVKVNVAPARFNPIRRIAGASSPAAGSRGQ CEEEEEEECCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA