Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497719

Identifier: 34497719

GI number: 34497719

Start: 2453068

End: 2453964

Strand: Direct

Name: 34497719

Synonym: CV_2264

Alternate gene names: NA

Gene position: 2453068-2453964 (Clockwise)

Preceding gene: 34497718

Following gene: 34497720

Centisome position: 51.63

GC content: 61.2

Gene sequence:

>897_bases
TTGGCGTTGGCGCCGGTCACATTGGGTCAGTCGCTGACCGTGACAACTTGCGTGATGGCGGCGCTGGAGACCGCCTCGGG
CGTGGCCGCGATCGTTTCCGGCGCGCTGGAAGATAGCGACCCAAAGGCTTCTTCGGCGCTGGGCTGGATATCGCTTGCCA
CTGGGGCGGCGGCGATGGGCGCGGGGTTGGGCGGCGGCGCGTTAAGGGCCACCGCGGGGATCAGGGCGCGGCTGGGCAAG
CTGGTGAGCGTAGGACTCAGCGGCAGAGGGGCCGAAGGAGCGGGCGCCGCGATGATGACGCGGGAGCAGCTCATTTCATC
GAGGATATCGGTACTGCCGCAAAACGATGTTTACGTCTTCGGGGTGACGACGCGCGAGAACTCCCAAGGCGGAACCTCAA
GGGAGCTTGCCTTGGCGTACCGCGGCATCGAAGACAAGGACAGCCATCTGGATGTTTTCATCAACATGAGCTTGCGCAGG
GGCAGGGAAAGCCATGCCGACATCAATGGCGTGACGTGGGAAGGGAAGCGCCTTTTCAAACGGCTTGAAGAAATCGTGCC
CAGGATGAGCGAAATAAAGAGCATCAGGGTGCTTGGCAGAGGATCGAACAGGCTGGCGGACTCCTTCTTCAAGAGGGCTG
GCCGCTCGCTCGTCACTTTCAACGATGGCGGGTTCTGGGTGCATGCAAACAACAGCGCTCTCTACAGAAACGCGCTCAGG
CCTGGCGTGAATGTTTTCGAAGAGGCATTTCATCGCGGGGGCGAGGCCGAGGCCATCGCAGTCACGAACGAATTCCTGAA
TGCGGAGTTGGCGAAGATGTCCAACCCCAGTGCCCGGACGCTGCTGATCCACGGAGTAGCGGATCATGACGTGCTCTTCA
TGGAGTACGCCAGATAA

Upstream 100 bases:

>100_bases
TGGGTACGTCTATTGCGGCGAAGATCCCGTCAACCGGACAGATCCCTCCGGACACCTGAGTTGGTAGGCTATCACGGGCA
TCGCGACTGGCGTTGTCGGG

Downstream 100 bases:

>100_bases
GGCCTGTGACTGGGCCTTTCTCCAGCGGGCATGGCGTGTGCAAACCTGGATGCGGCCCGTTGCCTGCGGCGCGGCGCCGT
CGGTGAGAGGATGCCAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MALAPVTLGQSLTVTTCVMAALETASGVAAIVSGALEDSDPKASSALGWISLATGAAAMGAGLGGGALRATAGIRARLGK
LVSVGLSGRGAEGAGAAMMTREQLISSRISVLPQNDVYVFGVTTRENSQGGTSRELALAYRGIEDKDSHLDVFINMSLRR
GRESHADINGVTWEGKRLFKRLEEIVPRMSEIKSIRVLGRGSNRLADSFFKRAGRSLVTFNDGGFWVHANNSALYRNALR
PGVNVFEEAFHRGGEAEAIAVTNEFLNAELAKMSNPSARTLLIHGVADHDVLFMEYAR

Sequences:

>Translated_298_residues
MALAPVTLGQSLTVTTCVMAALETASGVAAIVSGALEDSDPKASSALGWISLATGAAAMGAGLGGGALRATAGIRARLGK
LVSVGLSGRGAEGAGAAMMTREQLISSRISVLPQNDVYVFGVTTRENSQGGTSRELALAYRGIEDKDSHLDVFINMSLRR
GRESHADINGVTWEGKRLFKRLEEIVPRMSEIKSIRVLGRGSNRLADSFFKRAGRSLVTFNDGGFWVHANNSALYRNALR
PGVNVFEEAFHRGGEAEAIAVTNEFLNAELAKMSNPSARTLLIHGVADHDVLFMEYAR
>Mature_297_residues
ALAPVTLGQSLTVTTCVMAALETASGVAAIVSGALEDSDPKASSALGWISLATGAAAMGAGLGGGALRATAGIRARLGKL
VSVGLSGRGAEGAGAAMMTREQLISSRISVLPQNDVYVFGVTTRENSQGGTSRELALAYRGIEDKDSHLDVFINMSLRRG
RESHADINGVTWEGKRLFKRLEEIVPRMSEIKSIRVLGRGSNRLADSFFKRAGRSLVTFNDGGFWVHANNSALYRNALRP
GVNVFEEAFHRGGEAEAIAVTNEFLNAELAKMSNPSARTLLIHGVADHDVLFMEYAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31649; Mature: 31518

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAPVTLGQSLTVTTCVMAALETASGVAAIVSGALEDSDPKASSALGWISLATGAAAMG
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHC
AGLGGGALRATAGIRARLGKLVSVGLSGRGAEGAGAAMMTREQLISSRISVLPQNDVYVF
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
GVTTRENSQGGTSRELALAYRGIEDKDSHLDVFINMSLRRGRESHADINGVTWEGKRLFK
EEEECCCCCCCCCHHHHEEECCCCCCCCCEEEEEEEEHHCCCCCCCCCCCEEEHHHHHHH
RLEEIVPRMSEIKSIRVLGRGSNRLADSFFKRAGRSLVTFNDGGFWVHANNSALYRNALR
HHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCEEEEEECCEEEEEECCCHHHHHHHC
PGVNVFEEAFHRGGEAEAIAVTNEFLNAELAKMSNPSARTLLIHGVADHDVLFMEYAR
CCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure 
ALAPVTLGQSLTVTTCVMAALETASGVAAIVSGALEDSDPKASSALGWISLATGAAAMG
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHC
AGLGGGALRATAGIRARLGKLVSVGLSGRGAEGAGAAMMTREQLISSRISVLPQNDVYVF
CCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE
GVTTRENSQGGTSRELALAYRGIEDKDSHLDVFINMSLRRGRESHADINGVTWEGKRLFK
EEEECCCCCCCCCHHHHEEECCCCCCCCCEEEEEEEEHHCCCCCCCCCCCEEEHHHHHHH
RLEEIVPRMSEIKSIRVLGRGSNRLADSFFKRAGRSLVTFNDGGFWVHANNSALYRNALR
HHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCEEEEEECCEEEEEECCCHHHHHHHC
PGVNVFEEAFHRGGEAEAIAVTNEFLNAELAKMSNPSARTLLIHGVADHDVLFMEYAR
CCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA