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The map label for this gene is omp85 [H]

Identifier: 34497659

GI number: 34497659

Start: 2374673

End: 2376988

Strand: Direct

Name: omp85 [H]

Synonym: CV_2204

Alternate gene names: 34497659

Gene position: 2374673-2376988 (Clockwise)

Preceding gene: 34497658

Following gene: 34497660

Centisome position: 49.98

GC content: 61.53

Gene sequence:

>2316_bases
ATGAAATTGAAGCGACTCGCAGTAGCCGCAATGGGCCTGACCATGGCCACCGTTGCCATGGCTGCAGATCCGTTTGTGAT
CAAGGATATCCGCGTTGAAGGCCTGCAGCGTACCGAGCCGGGCACGGTCTTCAACTATCTGCCGGTCAAGGTGGGCGACA
CCTTCACCGACGCGAAGGCCAAGGAAGCGATCAAGGCGCTGTTCGGCACTGGATTCTTCAACGACGTGCGCGTGGAAAGC
CGCGGCGACACGCTGATCGTCACCGTGGCCGAACGCCCGGTGATCACCCAGCTGAACATCAACGGCGCCAAGGAATTCAG
CAAGGACCAGTTGAAGAAGGCGCTGAAGGACAATGGCTTCGCGGAATCGCTGATCTTCGACCAGGCGCTGCTGGACGGCG
CGGTGCAGGAGCTGAAGCGTCAGTATTACAGCCGCGGCAAGTACTCGGTGGAAATCACGCCCACCGTCACCAAGCTGGAA
CGAAACCGGGTGGCGGTGACGCTGGACATCAATGAAGGCGTGACCGCCCGCATCAGGGAAATCCGCATCGTCGGCGCCAA
TGCTTTCGCCCAGTCCAAGCTGCTGGACGAGTTCAGCCTGACCACCGGCGGCTGGCTGTCCTGGATCACCAAGGACGACC
AGTATTCCAAGCAGAAGCTGACCGGCGACCTCGAGAAGCTGAAGGCCTTCTACCAGAATCAGGGTTATATGGAATTCGGC
ATCGACTCCTCCCAGGTGTCGATCGGCGCGGACAAGAAGGACATGTACCTGGTCATCAACGTGCACGAGGGCAAGAAGTA
CACCGTGTCCGACGTGCGCCTGGCCGGCGACCTGAAGGTGCCGGAAGCCGAACTGATGAAGCTGATGCAGGTCAAGCGCG
GCGACACTTTCAACAATGAGAAGGTCACCGAGTCGGTGAAGGCCCTGAGCGACCGCTTGGGCAACGAGGGCTACGCCTTC
GCCAATGTCAACGTGCTGCCGGACATCGACCGCGAAAAGCAGACCGCCGCCTTCACCTTCTTTGTCGATCCGGGCCGCAA
GACCTATGTCCGCCGCGTCAATGTGGCCGGCAACAGCAAGACCCGCGACGAAGTGATCCGCCGCGAGCTGCGCCAGCTGG
AAGGCGCGCCCTACAACGCCGCCAACGTCAAGCGCAGCAAGGAGCGCCTGGAGCTGCTGGGCTATTTCGAGGACGTCAAC
GTCGAAACCCCGGCGGTGGCCGACGCGCCGGACCAGGTAGACATGAACATCGGCCTGAAGGAGCGGTCCACCGGCAGCAT
TTCCGGCAGCCTGGGCTATGTGCAGGGCGAGGGCCTGGTGCTGGGCGCCAACATCTCCCAGAGCAACATCTTCGGCTCGG
GCAAGTACATGTCCTTGGGCATGTCCACCGGCAAGGTCAACAAGAACTACTCGCTGTCGTTCACCGACCCGTATTTCACC
CCGGACGGCGTCAGCCTGGGCTACGACCTGTACAACCGCGTCTACAACCCGGACGCCACCTCGATTTCCGCGTACAAAAC
CAGCACCACCGGCGCAGACATGCGTTTCGGCGTGCCGATCACCGAGTACGACCGCATCAATTTCACGATCGGCGCGGAAA
AGACCGACATCACCACGTACAGCAACAGCCCGCAGCAGTACATCGACTTCGTCAAGCAGTACGGCAACAGCAACTACACG
GTGCTGGGCACCGTGGGCTGGGGCCGGGACACCCGGGACAGCGCGCTGTGGCCGACCCGCGGCGCCAGCATCCGCGTCAA
CGCCGACTTCGGCCTGCCGGGCGGCTCGCTGCAGTATTACAGCCTGACTCATCAGCAGACTTGGTTCTTCCCGCTGTCCA
AGGACTTCACGCTGATGCTGAACGGCGAATTGGGCTATGCTGACGGCTATGGCAAAACCAAGCAGCTGCCGTTCTTCAAG
AACTTCTACATGGGCGGCCTGGGTTCGGTCCGCGGCTACGACAGCAGCAGCATCGGCCCGTACGACTCGGTGGCGAATTC
CTACCTGGGCGGCAACCGCAAGGCGGTCGCGAACGTGGAAATCCTGTTCCCCTTCCCGGGGATGAAGGACAACAAGTCGC
TGCGCACCAGCCTGTTCTTCGACGCGGGCACCTTGTGGAACACCAACCTGACGGCTGCGGAAAAAGCGCAGGGCATCACC
AGCTCGCCGAGCGACGGCTTCCGCTATTCCGCGGGCTTGGCGCTGACCTGGCTGTCTCCGATGGGGCCGATGAAGTTCAG
TATCGCCAACCCGCTGAAGAAAGAGCAGGGCGACAAGATCCAGCGCTTCCAGTTCCAGTTGGGCACGGCGTTCTAA

Upstream 100 bases:

>100_bases
ATTGCTCGGACAAAAAATTGGTTTCATATTGCTGGCGTCTTTGATGGCTTTTGCCATGCTGAACGATTTCAGCCGCCTAT
TTGGGGGTTAAAACAAACCT

Downstream 100 bases:

>100_bases
CCGTTACAGGATGAGATCATGAAAGCATTGAAATGGTGGCTGGCGGTGCTGAGCGTGGCGGCGCTGCCGGTTCATGCCGC
CGACTTCAAGCTGGGCTTCG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 771; Mature: 771

Protein sequence:

>771_residues
MKLKRLAVAAMGLTMATVAMAADPFVIKDIRVEGLQRTEPGTVFNYLPVKVGDTFTDAKAKEAIKALFGTGFFNDVRVES
RGDTLIVTVAERPVITQLNINGAKEFSKDQLKKALKDNGFAESLIFDQALLDGAVQELKRQYYSRGKYSVEITPTVTKLE
RNRVAVTLDINEGVTARIREIRIVGANAFAQSKLLDEFSLTTGGWLSWITKDDQYSKQKLTGDLEKLKAFYQNQGYMEFG
IDSSQVSIGADKKDMYLVINVHEGKKYTVSDVRLAGDLKVPEAELMKLMQVKRGDTFNNEKVTESVKALSDRLGNEGYAF
ANVNVLPDIDREKQTAAFTFFVDPGRKTYVRRVNVAGNSKTRDEVIRRELRQLEGAPYNAANVKRSKERLELLGYFEDVN
VETPAVADAPDQVDMNIGLKERSTGSISGSLGYVQGEGLVLGANISQSNIFGSGKYMSLGMSTGKVNKNYSLSFTDPYFT
PDGVSLGYDLYNRVYNPDATSISAYKTSTTGADMRFGVPITEYDRINFTIGAEKTDITTYSNSPQQYIDFVKQYGNSNYT
VLGTVGWGRDTRDSALWPTRGASIRVNADFGLPGGSLQYYSLTHQQTWFFPLSKDFTLMLNGELGYADGYGKTKQLPFFK
NFYMGGLGSVRGYDSSSIGPYDSVANSYLGGNRKAVANVEILFPFPGMKDNKSLRTSLFFDAGTLWNTNLTAAEKAQGIT
SSPSDGFRYSAGLALTWLSPMGPMKFSIANPLKKEQGDKIQRFQFQLGTAF

Sequences:

>Translated_771_residues
MKLKRLAVAAMGLTMATVAMAADPFVIKDIRVEGLQRTEPGTVFNYLPVKVGDTFTDAKAKEAIKALFGTGFFNDVRVES
RGDTLIVTVAERPVITQLNINGAKEFSKDQLKKALKDNGFAESLIFDQALLDGAVQELKRQYYSRGKYSVEITPTVTKLE
RNRVAVTLDINEGVTARIREIRIVGANAFAQSKLLDEFSLTTGGWLSWITKDDQYSKQKLTGDLEKLKAFYQNQGYMEFG
IDSSQVSIGADKKDMYLVINVHEGKKYTVSDVRLAGDLKVPEAELMKLMQVKRGDTFNNEKVTESVKALSDRLGNEGYAF
ANVNVLPDIDREKQTAAFTFFVDPGRKTYVRRVNVAGNSKTRDEVIRRELRQLEGAPYNAANVKRSKERLELLGYFEDVN
VETPAVADAPDQVDMNIGLKERSTGSISGSLGYVQGEGLVLGANISQSNIFGSGKYMSLGMSTGKVNKNYSLSFTDPYFT
PDGVSLGYDLYNRVYNPDATSISAYKTSTTGADMRFGVPITEYDRINFTIGAEKTDITTYSNSPQQYIDFVKQYGNSNYT
VLGTVGWGRDTRDSALWPTRGASIRVNADFGLPGGSLQYYSLTHQQTWFFPLSKDFTLMLNGELGYADGYGKTKQLPFFK
NFYMGGLGSVRGYDSSSIGPYDSVANSYLGGNRKAVANVEILFPFPGMKDNKSLRTSLFFDAGTLWNTNLTAAEKAQGIT
SSPSDGFRYSAGLALTWLSPMGPMKFSIANPLKKEQGDKIQRFQFQLGTAF
>Mature_771_residues
MKLKRLAVAAMGLTMATVAMAADPFVIKDIRVEGLQRTEPGTVFNYLPVKVGDTFTDAKAKEAIKALFGTGFFNDVRVES
RGDTLIVTVAERPVITQLNINGAKEFSKDQLKKALKDNGFAESLIFDQALLDGAVQELKRQYYSRGKYSVEITPTVTKLE
RNRVAVTLDINEGVTARIREIRIVGANAFAQSKLLDEFSLTTGGWLSWITKDDQYSKQKLTGDLEKLKAFYQNQGYMEFG
IDSSQVSIGADKKDMYLVINVHEGKKYTVSDVRLAGDLKVPEAELMKLMQVKRGDTFNNEKVTESVKALSDRLGNEGYAF
ANVNVLPDIDREKQTAAFTFFVDPGRKTYVRRVNVAGNSKTRDEVIRRELRQLEGAPYNAANVKRSKERLELLGYFEDVN
VETPAVADAPDQVDMNIGLKERSTGSISGSLGYVQGEGLVLGANISQSNIFGSGKYMSLGMSTGKVNKNYSLSFTDPYFT
PDGVSLGYDLYNRVYNPDATSISAYKTSTTGADMRFGVPITEYDRINFTIGAEKTDITTYSNSPQQYIDFVKQYGNSNYT
VLGTVGWGRDTRDSALWPTRGASIRVNADFGLPGGSLQYYSLTHQQTWFFPLSKDFTLMLNGELGYADGYGKTKQLPFFK
NFYMGGLGSVRGYDSSSIGPYDSVANSYLGGNRKAVANVEILFPFPGMKDNKSLRTSLFFDAGTLWNTNLTAAEKAQGIT
SSPSDGFRYSAGLALTWLSPMGPMKFSIANPLKKEQGDKIQRFQFQLGTAF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=455, Percent_Identity=24.8351648351648, Blast_Score=85, Evalue=3e-16,
Organism=Escherichia coli, GI1786374, Length=818, Percent_Identity=36.1858190709046, Blast_Score=503, Evalue=1e-143,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85251; Mature: 85251

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRLAVAAMGLTMATVAMAADPFVIKDIRVEGLQRTEPGTVFNYLPVKVGDTFTDAKA
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHH
KEAIKALFGTGFFNDVRVESRGDTLIVTVAERPVITQLNINGAKEFSKDQLKKALKDNGF
HHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHCCHHHHHHHHHCCCC
AESLIFDQALLDGAVQELKRQYYSRGKYSVEITPTVTKLERNRVAVTLDINEGVTARIRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHEEECCCEEEEEEECCCCCEEEEEE
IRIVGANAFAQSKLLDEFSLTTGGWLSWITKDDQYSKQKLTGDLEKLKAFYQNQGYMEFG
EEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHCCCEEEEC
IDSSQVSIGADKKDMYLVINVHEGKKYTVSDVRLAGDLKVPEAELMKLMQVKRGDTFNNE
CCCCEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCH
KVTESVKALSDRLGNEGYAFANVNVLPDIDREKQTAAFTFFVDPGRKTYVRRVNVAGNSK
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCC
TRDEVIRRELRQLEGAPYNAANVKRSKERLELLGYFEDVNVETPAVADAPDQVDMNIGLK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ERSTGSISGSLGYVQGEGLVLGANISQSNIFGSGKYMSLGMSTGKVNKNYSLSFTDPYFT
CCCCCCCCCCEEEEECCCEEEECCCCCCCEECCCCEEEEECCCCCCCCCEEEEECCCCCC
PDGVSLGYDLYNRVYNPDATSISAYKTSTTGADMRFGVPITEYDRINFTIGAEKTDITTY
CCCCEECHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCEEEEC
SNSPQQYIDFVKQYGNSNYTVLGTVGWGRDTRDSALWPTRGASIRVNADFGLPGGSLQYY
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
SLTHQQTWFFPLSKDFTLMLNGELGYADGYGKTKQLPFFKNFYMGGLGSVRGYDSSSIGP
EEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
YDSVANSYLGGNRKAVANVEILFPFPGMKDNKSLRTSLFFDAGTLWNTNLTAAEKAQGIT
HHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEECCCEECCCCCHHHHCCCCC
SSPSDGFRYSAGLALTWLSPMGPMKFSIANPLKKEQGDKIQRFQFQLGTAF
CCCCCCCEEECCEEEEEECCCCCEEEECCCCHHHHCCCHHEEEEEEECCCC
>Mature Secondary Structure
MKLKRLAVAAMGLTMATVAMAADPFVIKDIRVEGLQRTEPGTVFNYLPVKVGDTFTDAKA
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCHHH
KEAIKALFGTGFFNDVRVESRGDTLIVTVAERPVITQLNINGAKEFSKDQLKKALKDNGF
HHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEECCCHHHCCHHHHHHHHHCCCC
AESLIFDQALLDGAVQELKRQYYSRGKYSVEITPTVTKLERNRVAVTLDINEGVTARIRE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHEEECCCEEEEEEECCCCCEEEEEE
IRIVGANAFAQSKLLDEFSLTTGGWLSWITKDDQYSKQKLTGDLEKLKAFYQNQGYMEFG
EEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHCCCEEEEC
IDSSQVSIGADKKDMYLVINVHEGKKYTVSDVRLAGDLKVPEAELMKLMQVKRGDTFNNE
CCCCEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCH
KVTESVKALSDRLGNEGYAFANVNVLPDIDREKQTAAFTFFVDPGRKTYVRRVNVAGNSK
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCC
TRDEVIRRELRQLEGAPYNAANVKRSKERLELLGYFEDVNVETPAVADAPDQVDMNIGLK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ERSTGSISGSLGYVQGEGLVLGANISQSNIFGSGKYMSLGMSTGKVNKNYSLSFTDPYFT
CCCCCCCCCCEEEEECCCEEEECCCCCCCEECCCCEEEEECCCCCCCCCEEEEECCCCCC
PDGVSLGYDLYNRVYNPDATSISAYKTSTTGADMRFGVPITEYDRINFTIGAEKTDITTY
CCCCEECHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCCCCEEEEEECCCCCEEEEC
SNSPQQYIDFVKQYGNSNYTVLGTVGWGRDTRDSALWPTRGASIRVNADFGLPGGSLQYY
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
SLTHQQTWFFPLSKDFTLMLNGELGYADGYGKTKQLPFFKNFYMGGLGSVRGYDSSSIGP
EEECCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
YDSVANSYLGGNRKAVANVEILFPFPGMKDNKSLRTSLFFDAGTLWNTNLTAAEKAQGIT
HHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEECCCEECCCCCHHHHCCCCC
SSPSDGFRYSAGLALTWLSPMGPMKFSIANPLKKEQGDKIQRFQFQLGTAF
CCCCCCCEEECCEEEEEECCCCCEEEECCCCHHHHCCCHHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]