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The map label for this gene is yedJ [H]

Identifier: 34497644

GI number: 34497644

Start: 2360945

End: 2361712

Strand: Reverse

Name: yedJ [H]

Synonym: CV_2189

Alternate gene names: 34497644

Gene position: 2361712-2360945 (Counterclockwise)

Preceding gene: 34497645

Following gene: 34497643

Centisome position: 49.71

GC content: 67.71

Gene sequence:

>768_bases
ATGACAATACGGATGATTCCTCATCCGATATTTTCGTCGCCAACAAAAAGGCGGCGCGAAAAACCGGACCCGCCGGCCCG
CGCCGGCGCGGCGCAACCATCAGGACCTGCCCGCATGACCCCGCAACAACAAACCGAATGGCAGCAACGCCTGATCGCCT
TGCTGGAAAGCCAGCCGCCCGACGATGACGGCGCGCACGACCTCAGCCATCTCCACCGCGTCTGGGCGGTGGCCCGCACG
CTGTTGGCGCACTATCCCGACGCCGACTCCATCGTCGTCATGGCCGGCAGCTATCTGCACGACCTCGTCAATCTGCCCAA
GAACCATCCGCAGCGGCAACTCGCCTCGCACTGGTCCGCCGAGCGCGCCCGCCAGTTGCTGGCGGACAGCGGCCTCACCG
AGGCCCAGCTGGACAACCTGGCCCACGCCATCGAGGCGCACAGCTACTCCGCCGCCATCCCGCCGCGCACGCTGGAAGCC
CGGATCGTTCAAGACGCCGACCGCATGGATGCCCTGGGTCCGGTGGGGCTGGCGCGGATGTTCTACGTGTCCGGCCGCAT
GGGGCGCGCGCTGGCCCACCCGCTGGATCCGCTGGCCGAGCACCGCGGACGGGACGACCAGGCCTGGGCGATCGACCACA
TCGACGTCAAGCTGGCCAAGCTGCCTGGCATGATGCAGACGGAAGCCGGGCGCGCCATGGCCGAGCGCAAGCTGGAATGG
CTGTTCCATTTCCGCGACGAGTTCTGCCGGGACTGGATGGCCCGCTGA

Upstream 100 bases:

>100_bases
CTCCCTCTTGTTGCGCCACCAGGCCGTCTATCGCCTGTCCCAGTGGGAAATGACGCTGTCCGCGCCACGTTAGCCGGCAT
TCCCGCCGCCCGGTGTTAAA

Downstream 100 bases:

>100_bases
GACAAAACCGCCGGGAGCGCCGCCATGATGATCAGGAAACTGCCGCGCAACACGCAAGGCCGGGACTGGGTGGTCGGCGA
CGTTCACGGCTGCTTCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTIRMIPHPIFSSPTKRRREKPDPPARAGAAQPSGPARMTPQQQTEWQQRLIALLESQPPDDDGAHDLSHLHRVWAVART
LLAHYPDADSIVVMAGSYLHDLVNLPKNHPQRQLASHWSAERARQLLADSGLTEAQLDNLAHAIEAHSYSAAIPPRTLEA
RIVQDADRMDALGPVGLARMFYVSGRMGRALAHPLDPLAEHRGRDDQAWAIDHIDVKLAKLPGMMQTEAGRAMAERKLEW
LFHFRDEFCRDWMAR

Sequences:

>Translated_255_residues
MTIRMIPHPIFSSPTKRRREKPDPPARAGAAQPSGPARMTPQQQTEWQQRLIALLESQPPDDDGAHDLSHLHRVWAVART
LLAHYPDADSIVVMAGSYLHDLVNLPKNHPQRQLASHWSAERARQLLADSGLTEAQLDNLAHAIEAHSYSAAIPPRTLEA
RIVQDADRMDALGPVGLARMFYVSGRMGRALAHPLDPLAEHRGRDDQAWAIDHIDVKLAKLPGMMQTEAGRAMAERKLEW
LFHFRDEFCRDWMAR
>Mature_254_residues
TIRMIPHPIFSSPTKRRREKPDPPARAGAAQPSGPARMTPQQQTEWQQRLIALLESQPPDDDGAHDLSHLHRVWAVARTL
LAHYPDADSIVVMAGSYLHDLVNLPKNHPQRQLASHWSAERARQLLADSGLTEAQLDNLAHAIEAHSYSAAIPPRTLEAR
IVQDADRMDALGPVGLARMFYVSGRMGRALAHPLDPLAEHRGRDDQAWAIDHIDVKLAKLPGMMQTEAGRAMAERKLEWL
FHFRDEFCRDWMAR

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=200, Percent_Identity=46, Blast_Score=174, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28744; Mature: 28613

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRMIPHPIFSSPTKRRREKPDPPARAGAAQPSGPARMTPQQQTEWQQRLIALLESQPP
CEEEECCCHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
DDDGAHDLSHLHRVWAVARTLLAHYPDADSIVVMAGSYLHDLVNLPKNHPQRQLASHWSA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ERARQLLADSGLTEAQLDNLAHAIEAHSYSAAIPPRTLEARIVQDADRMDALGPVGLARM
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
FYVSGRMGRALAHPLDPLAEHRGRDDQAWAIDHIDVKLAKLPGMMQTEAGRAMAERKLEW
HHHHCHHHHHHHCCCCHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LFHFRDEFCRDWMAR
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIRMIPHPIFSSPTKRRREKPDPPARAGAAQPSGPARMTPQQQTEWQQRLIALLESQPP
EEEECCCHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
DDDGAHDLSHLHRVWAVARTLLAHYPDADSIVVMAGSYLHDLVNLPKNHPQRQLASHWSA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ERARQLLADSGLTEAQLDNLAHAIEAHSYSAAIPPRTLEARIVQDADRMDALGPVGLARM
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
FYVSGRMGRALAHPLDPLAEHRGRDDQAWAIDHIDVKLAKLPGMMQTEAGRAMAERKLEW
HHHHCHHHHHHHCCCCHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LFHFRDEFCRDWMAR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]