| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is pphA [H]
Identifier: 34497643
GI number: 34497643
Start: 2360198
End: 2360920
Strand: Reverse
Name: pphA [H]
Synonym: CV_2188
Alternate gene names: 34497643
Gene position: 2360920-2360198 (Counterclockwise)
Preceding gene: 34497644
Following gene: 34497642
Centisome position: 49.69
GC content: 69.16
Gene sequence:
>723_bases ATGATGATCAGGAAACTGCCGCGCAACACGCAAGGCCGGGACTGGGTGGTCGGCGACGTTCACGGCTGCTTCGCCCAACT GGCCCGGCTGCTCAAGATCATCGCCTTCGATCCCGCCCGCGACCGCCTGCTATCCGTCGGCGACCTGGTGGATAGGGGGC CGGACAGCGCGATGGTCGGCGAATGGCTGGCCCAGCCGTGGTTTCACGCCGTGCGAGGCAATCACGAGCAAATGGCGCTG GACGCGATGCGGGATCCCCTGCGCGACCTGGAGCGTCATCTGCGCAACGGCGGCCGCTGGCTGACGGAATTGTCTCCCGC CGAGCGCGACGCCTGCGTGGCCGCCCTGTCCGGCTTGCCGCTGGCGCTGGAGGTGGACACCGAGGGCGGCAAGATAGGCG TGCTCCACGCCGACTGCCCCGGCAACGACTGGACCGCGATGGCCGCGAGGCTGGAAGCCGGCCAGCCCGCCGCGCAAGAC AGCGATGTGCTGCTGTGGGCGCGCGACCGCGTGCAAAACGGCGGCGGCGGCGCCGCGGCCGGCGTGGAGCTGGTGCTGGC CGGACACACGCCGCAACCCCGCGCCATCCTGTACGACAATGTGATGCACCTGGACACCGGCGCCGTCTACGGCGGCAAGC TCACCGTGTTCTGCCTTCAGGATTTCGTCGAAGTGTCGCTGCCGTCCGGTTTCGAGCACCTGGCCCGCTTCGAGCTGCAT TGA
Upstream 100 bases:
>100_bases CGCCATGGCCGAGCGCAAGCTGGAATGGCTGTTCCATTTCCGCGACGAGTTCTGCCGGGACTGGATGGCCCGCTGAGACA AAACCGCCGGGAGCGCCGCC
Downstream 100 bases:
>100_bases GCATGCGTTGGCAGGCTCTAGCCGCGGGCCACGCCCGCCGCTAGAATGCGCGCTCAGCAGACCAAGGACACGACAATGGC CGAGCGCAACAAGAAAACCG
Product: phosphoprotein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MMIRKLPRNTQGRDWVVGDVHGCFAQLARLLKIIAFDPARDRLLSVGDLVDRGPDSAMVGEWLAQPWFHAVRGNHEQMAL DAMRDPLRDLERHLRNGGRWLTELSPAERDACVAALSGLPLALEVDTEGGKIGVLHADCPGNDWTAMAARLEAGQPAAQD SDVLLWARDRVQNGGGGAAAGVELVLAGHTPQPRAILYDNVMHLDTGAVYGGKLTVFCLQDFVEVSLPSGFEHLARFELH
Sequences:
>Translated_240_residues MMIRKLPRNTQGRDWVVGDVHGCFAQLARLLKIIAFDPARDRLLSVGDLVDRGPDSAMVGEWLAQPWFHAVRGNHEQMAL DAMRDPLRDLERHLRNGGRWLTELSPAERDACVAALSGLPLALEVDTEGGKIGVLHADCPGNDWTAMAARLEAGQPAAQD SDVLLWARDRVQNGGGGAAAGVELVLAGHTPQPRAILYDNVMHLDTGAVYGGKLTVFCLQDFVEVSLPSGFEHLARFELH >Mature_240_residues MMIRKLPRNTQGRDWVVGDVHGCFAQLARLLKIIAFDPARDRLLSVGDLVDRGPDSAMVGEWLAQPWFHAVRGNHEQMAL DAMRDPLRDLERHLRNGGRWLTELSPAERDACVAALSGLPLALEVDTEGGKIGVLHADCPGNDWTAMAARLEAGQPAAQD SDVLLWARDRVQNGGGGAAAGVELVLAGHTPQPRAILYDNVMHLDTGAVYGGKLTVFCLQDFVEVSLPSGFEHLARFELH
Specific function: Can hydrolyze phosphorylated Ser-, Thr- or Tyr- substrates in vitro. The natural substrate is unknown [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPP phosphatase family. PP-1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081988, Length=212, Percent_Identity=39.1509433962264, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789090, Length=212, Percent_Identity=34.9056603773585, Blast_Score=119, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 26154; Mature: 26154
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00125 SER_THR_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIRKLPRNTQGRDWVVGDVHGCFAQLARLLKIIAFDPARDRLLSVGDLVDRGPDSAMVG CCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH EWLAQPWFHAVRGNHEQMALDAMRDPLRDLERHLRNGGRWLTELSPAERDACVAALSGLP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCC LALEVDTEGGKIGVLHADCPGNDWTAMAARLEAGQPAAQDSDVLLWARDRVQNGGGGAAA EEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCC GVELVLAGHTPQPRAILYDNVMHLDTGAVYGGKLTVFCLQDFVEVSLPSGFEHLARFELH CEEEEEECCCCCCCEEEECCEEEECCCCEECCEEEEHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MMIRKLPRNTQGRDWVVGDVHGCFAQLARLLKIIAFDPARDRLLSVGDLVDRGPDSAMVG CCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH EWLAQPWFHAVRGNHEQMALDAMRDPLRDLERHLRNGGRWLTELSPAERDACVAALSGLP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCC LALEVDTEGGKIGVLHADCPGNDWTAMAARLEAGQPAAQDSDVLLWARDRVQNGGGGAAA EEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCC GVELVLAGHTPQPRAILYDNVMHLDTGAVYGGKLTVFCLQDFVEVSLPSGFEHLARFELH CEEEEEECCCCCCCEEEECCEEEECCCCEECCEEEEHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11717262; 11677609 [H]