Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is apaG

Identifier: 34497638

GI number: 34497638

Start: 2355427

End: 2355807

Strand: Direct

Name: apaG

Synonym: CV_2183

Alternate gene names: 34497638

Gene position: 2355427-2355807 (Clockwise)

Preceding gene: 34497633

Following gene: 34497639

Centisome position: 49.58

GC content: 65.35

Gene sequence:

>381_bases
ATGGCCGATAAACTCTACCAGATGGAGGTGCAGGCGGAGCCACAATACGTGGCCGAACAGTCCAGCGTCGCCAACGACGT
CTACGTGTTCGCCTACCGCGTCCGCATCACCAATACCGGCAGCGAGCCGGCGCAGCTGATCAGCCGCCACTGGATCATCA
CCGACGCCAATCAGCAGGTGCAGGAGGTGCGCGGCATGGGCGTGGTGGGCGAGCAGCCGCATCTCGACCCGGGCCAGGTG
TTCGAGTACTCCAGCGCGGCCCACATCACCACGCCGTACGGCAGCATGAAGGGCGCCTACCAGATGATGGCGGACGACGG
TCGGCGCTTCGAGGCGTCCATTCCCGAGATGACGCTGGTGGCGCCCCGGGTGCTGCACTAA

Upstream 100 bases:

>100_bases
TGCTCTGACATCGATAAACGAGGAATGCCCGGCATTCTACCGCGCCAAAAGCGGTTTGGCCGGATAAAATGAAAACCAAG
ATCAATCAGGAGAAGCCGCA

Downstream 100 bases:

>100_bases
TCGCTGTTACAGGAAGGGTCCTTGTCGTCGCGCGGCCAGGTCCACCAGACGATGAAGGTGGCGAGCCCGCCGGCTCCCAG
CGCTTCCAGCAATAGAATCC

Product: ApaG protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQV
FEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLVAPRVLH

Sequences:

>Translated_126_residues
MADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQV
FEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLVAPRVLH
>Mature_125_residues
ADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQVF
EYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLVAPRVLH

Specific function: Unknown

COG id: COG2967

COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 apaG domain

Homologues:

Organism=Homo sapiens, GI15812186, Length=121, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI15812188, Length=121, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI7661672, Length=114, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786235, Length=117, Percent_Identity=44.4444444444444, Blast_Score=110, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21356905, Length=107, Percent_Identity=36.4485981308411, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24644238, Length=107, Percent_Identity=36.4485981308411, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): APAG_CHRVO (Q7NW07)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901853.1
- ProteinModelPortal:   Q7NW07
- SMR:   Q7NW07
- GeneID:   2549392
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_2183
- NMPDR:   fig|243365.1.peg.2183
- HOGENOM:   HBG746214
- OMA:   SRHWVIT
- PhylomeDB:   Q7NW07
- ProtClustDB:   PRK05461
- BioCyc:   CVIO243365:CV_2183-MONOMER
- HAMAP:   MF_00791
- InterPro:   IPR007474
- InterPro:   IPR023065
- Gene3D:   G3DSA:2.60.40.1470

Pfam domain/function: PF04379 DUF525; SSF110069 ApaG

EC number: NA

Molecular weight: Translated: 14106; Mature: 13975

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS51087 APAG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQV
CCCCEEEEEECCCCHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHCEEEECCHHHH
QEVRGMGVVGEQPHLDPGQVFEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLV
HHHHCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHCCCCCEEECCCCCEEEC
APRVLH
CCCCCC
>Mature Secondary Structure 
ADKLYQMEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQV
CCCEEEEEECCCCHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHCEEEECCHHHH
QEVRGMGVVGEQPHLDPGQVFEYSSAAHITTPYGSMKGAYQMMADDGRRFEASIPEMTLV
HHHHCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCHHHHHHCCCCCEEECCCCCEEEC
APRVLH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782