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The map label for this gene is yueD [H]

Identifier: 34497636

GI number: 34497636

Start: 2353844

End: 2354596

Strand: Reverse

Name: yueD [H]

Synonym: CV_2181

Alternate gene names: 34497636

Gene position: 2354596-2353844 (Counterclockwise)

Preceding gene: 34497637

Following gene: 34497635

Centisome position: 49.56

GC content: 70.78

Gene sequence:

>753_bases
ATGTATGCATTCATCGTCACCGGCGCTTCGCGCGGCCTGGGCTACGCCATCTGCGAGACGCTGCTGAACGACGGTTACTC
CGTCGTCGGCATCGCCCGCAACGCCGGCTCGGCGCTGGCAGGCCTGGCCGCCCGCCATCCTGAGCGGCTGCAGGCCGTCA
ACGCCGACCTGTCCGACGCCGCGCAAGCCGCCGCCTCGGTCCACGCCGCGCTGCAGCAGCTGCCGCTGCCGGCATGCGCG
ACCGTCACGCTGATCAACAACGCCGGCGTGGTGACCCCCATCGCCCAGGCCGGCCATTATCCGGCCGACGAAGTGGTCAA
GGCCGTCGCCGTCAACGTCACCGCGCCGCTGCTGGCCACCGACGCGCTGCTGTCCGCCACCAACCACCTGCCGGCGCGCC
GCCGCGTCCTGAACATCTCGTCCGGCGCCGCCGCCAAGGCCTACCCGGGCTGGAGCGTGTATTGCGCCACCAAGGCCGCG
CTGGACCATTTCAGCCGCAGCGCGGCTGTCGAACAGGAAAGCCACGCCAATCCGGCGCAGATCGTCGCGCTGTATCCGGG
CGTGGTGGACACCGACATGCAGGGCTGCATCCGCGCCAGCGACGAAGGCCAGTTCCCGCAGAAGGCCCGCTTCGACGCGC
TGAAGGCAGACGGCGCGCTGAGCAGCCCGGCCGACGCCGCGCGCAAGATCGTCGACTACCTGGTGTCGCCGGCTTTCGGC
CGGCAGCCCGTCGTCGACATCCGCGAACTCTGA

Upstream 100 bases:

>100_bases
AAAGACTACAAGGCGGTCATCGACGCGATGCGCGCCGAACTGGCCCGCGTCCAAGCATAAGAACGCTGCGCCGCCATTTC
ACGCATCAAGGGGTAAGACC

Downstream 100 bases:

>100_bases
ACACCCTCATCCCCATTCCGCCGCGGCCCGCGCGCCGCGGCAACAAAGCAGACACATGAATCTCAAGCACATCAAAGCCG
TCGCCTTCGACCTGGACGGC

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MYAFIVTGASRGLGYAICETLLNDGYSVVGIARNAGSALAGLAARHPERLQAVNADLSDAAQAAASVHAALQQLPLPACA
TVTLINNAGVVTPIAQAGHYPADEVVKAVAVNVTAPLLATDALLSATNHLPARRRVLNISSGAAAKAYPGWSVYCATKAA
LDHFSRSAAVEQESHANPAQIVALYPGVVDTDMQGCIRASDEGQFPQKARFDALKADGALSSPADAARKIVDYLVSPAFG
RQPVVDIREL

Sequences:

>Translated_250_residues
MYAFIVTGASRGLGYAICETLLNDGYSVVGIARNAGSALAGLAARHPERLQAVNADLSDAAQAAASVHAALQQLPLPACA
TVTLINNAGVVTPIAQAGHYPADEVVKAVAVNVTAPLLATDALLSATNHLPARRRVLNISSGAAAKAYPGWSVYCATKAA
LDHFSRSAAVEQESHANPAQIVALYPGVVDTDMQGCIRASDEGQFPQKARFDALKADGALSSPADAARKIVDYLVSPAFG
RQPVVDIREL
>Mature_250_residues
MYAFIVTGASRGLGYAICETLLNDGYSVVGIARNAGSALAGLAARHPERLQAVNADLSDAAQAAASVHAALQQLPLPACA
TVTLINNAGVVTPIAQAGHYPADEVVKAVAVNVTAPLLATDALLSATNHLPARRRVLNISSGAAAKAYPGWSVYCATKAA
LDHFSRSAAVEQESHANPAQIVALYPGVVDTDMQGCIRASDEGQFPQKARFDALKADGALSSPADAARKIVDYLVSPAFG
RQPVVDIREL

Specific function: Reduces benzil stereospecifically to (S)-benzoin. Can also reduces 1-phenyl-1,2-propanedione, 1,4-naphthoquinone, 1-(4- methyl-phenyl)-2-phenyl-ethane-1,2-dione, 1-(4-fluoro-phenyl)-2- phenyl-ethane-1,2-dione, methyl benzoylformate, p- nitrobenzaldehyde i

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4507185, Length=255, Percent_Identity=32.5490196078431, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1787820, Length=211, Percent_Identity=26.0663507109005, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787335, Length=191, Percent_Identity=30.3664921465969, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=194, Percent_Identity=33.5051546391753, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322226, Length=201, Percent_Identity=30.3482587064677, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25882; Mature: 25882

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAFIVTGASRGLGYAICETLLNDGYSVVGIARNAGSALAGLAARHPERLQAVNADLSDA
CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCHHHHHHHCCCHHHH
AQAAASVHAALQQLPLPACATVTLINNAGVVTPIAQAGHYPADEVVKAVAVNVTAPLLAT
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DALLSATNHLPARRRVLNISSGAAAKAYPGWSVYCATKAALDHFSRSAAVEQESHANPAQ
HHHHHHHCCCCHHHHEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHCCCCEE
IVALYPGVVDTDMQGCIRASDEGQFPQKARFDALKADGALSSPADAARKIVDYLVSPAFG
EEEECCCCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
RQPVVDIREL
CCCCCHHHCC
>Mature Secondary Structure
MYAFIVTGASRGLGYAICETLLNDGYSVVGIARNAGSALAGLAARHPERLQAVNADLSDA
CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCHHHHHHHCCCHHHH
AQAAASVHAALQQLPLPACATVTLINNAGVVTPIAQAGHYPADEVVKAVAVNVTAPLLAT
HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DALLSATNHLPARRRVLNISSGAAAKAYPGWSVYCATKAALDHFSRSAAVEQESHANPAQ
HHHHHHHCCCCHHHHEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHCCCCEE
IVALYPGVVDTDMQGCIRASDEGQFPQKARFDALKADGALSSPADAARKIVDYLVSPAFG
EEEECCCCCCCCHHHHEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
RQPVVDIREL
CCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11745140; 11796169 [H]