| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497589
Identifier: 34497589
GI number: 34497589
Start: 2317838
End: 2318764
Strand: Reverse
Name: 34497589
Synonym: CV_2134
Alternate gene names: NA
Gene position: 2318764-2317838 (Counterclockwise)
Preceding gene: 34497590
Following gene: 34497588
Centisome position: 48.8
GC content: 61.27
Gene sequence:
>927_bases ATGAGCGACCGTTTGAAGAAACTCCGGGTAGTCGACCCGGTACTGACCAGCCTGGCGCGCGGCTATCGCAACGCGCAATA CATCGGCGAGAGCCTGTTTCCGATTGCGCCGATGGACAAGGAGGCCGGCATCATCCCGCAGTTCGGCAAGGAGGCCTTCT TGTTGTGGGAAACCGAGCGGGCCATCCGCGGCAAGACGAATGTGATGACTGCCGACGACGCCAACACCATGGACGTGGTG CTGCGCGAGCATGACCTGGCCTATCCGGTGGACTATCGCGAGCAAGCCGAATCGATGTTCAACGAAGAGGCCAAGGCCGC CAAACGAGTCAAAGATGCCATCGACCAGCGCCGTGAAGTCGCTGCGGCTGTCTTGGCGCAAAACCCCAAGACTTACCTAC CCGGTGCCAAGGTAGCGCTGTCCGGCACCAGCAAATGGATAAGCGGCGGCGGCGATCCGATCAAGGATGTGGAGGACGGT AAAGAGGTGGTGCGCCAGCGTACTGGCATGCGTCCCAACACCGCCGTCATCGGGGCATCCGCCTACGCCACGCTGAAGTT CCACCCCAAGCTGGCCAACGCCCTCGGCACTCAAGAGCGCAAGCTGATCACGCTAGAACATTTGAAGGCGTTGTGGGGTG TAGAAGACATTTACATCGGCGAAGCGCTGGCAGCGGATGGCCGCGGCGCGATGGGCGACATTTGGGGCGACAACGTGGTA CTGGCCTATGTGGCCAAGCCGGCCGCAGGTAGCGAAAACGACTCTGACATCCCGTCCTTCGGCTACACCCTGCGCAAGCG CAACATGCCGGAAACCGACAAGTACGACGGCGAAGGCGGCAAGGTGCGTTACGTGCGGCACACCGACATCTACAAGCTGG TGGTGGTCGGCGCCGATGCTGGCTATCTGATCGCTGACGTGGCGTAA
Upstream 100 bases:
>100_bases GCACAACCGCGCTACCGCCCTGGCCGCCGAGAAGGGCGTTCCCTACGAGCAGGCCGTGCGCCAGCTGCTGAAATCCCGTT CCAACTGATAAGGAGCCGCC
Downstream 100 bases:
>100_bases CGGGGGATATATGCCGAGCTATCGCATTGGCGGCATCGCCATCAAGCACAACGGGGAGTTGCTGACCGAAGGCCAAACCA TTGAGCTGGACGAACTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSDRLKKLRVVDPVLTSLARGYRNAQYIGESLFPIAPMDKEAGIIPQFGKEAFLLWETERAIRGKTNVMTADDANTMDVV LREHDLAYPVDYREQAESMFNEEAKAAKRVKDAIDQRREVAAAVLAQNPKTYLPGAKVALSGTSKWISGGGDPIKDVEDG KEVVRQRTGMRPNTAVIGASAYATLKFHPKLANALGTQERKLITLEHLKALWGVEDIYIGEALAADGRGAMGDIWGDNVV LAYVAKPAAGSENDSDIPSFGYTLRKRNMPETDKYDGEGGKVRYVRHTDIYKLVVVGADAGYLIADVA
Sequences:
>Translated_308_residues MSDRLKKLRVVDPVLTSLARGYRNAQYIGESLFPIAPMDKEAGIIPQFGKEAFLLWETERAIRGKTNVMTADDANTMDVV LREHDLAYPVDYREQAESMFNEEAKAAKRVKDAIDQRREVAAAVLAQNPKTYLPGAKVALSGTSKWISGGGDPIKDVEDG KEVVRQRTGMRPNTAVIGASAYATLKFHPKLANALGTQERKLITLEHLKALWGVEDIYIGEALAADGRGAMGDIWGDNVV LAYVAKPAAGSENDSDIPSFGYTLRKRNMPETDKYDGEGGKVRYVRHTDIYKLVVVGADAGYLIADVA >Mature_307_residues SDRLKKLRVVDPVLTSLARGYRNAQYIGESLFPIAPMDKEAGIIPQFGKEAFLLWETERAIRGKTNVMTADDANTMDVVL REHDLAYPVDYREQAESMFNEEAKAAKRVKDAIDQRREVAAAVLAQNPKTYLPGAKVALSGTSKWISGGGDPIKDVEDGK EVVRQRTGMRPNTAVIGASAYATLKFHPKLANALGTQERKLITLEHLKALWGVEDIYIGEALAADGRGAMGDIWGDNVVL AYVAKPAAGSENDSDIPSFGYTLRKRNMPETDKYDGEGGKVRYVRHTDIYKLVVVGADAGYLIADVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33746; Mature: 33615
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLKKLRVVDPVLTSLARGYRNAQYIGESLFPIAPMDKEAGIIPQFGKEAFLLWETER CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH AIRGKTNVMTADDANTMDVVLREHDLAYPVDYREQAESMFNEEAKAAKRVKDAIDQRREV HHCCCCCEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAVLAQNPKTYLPGAKVALSGTSKWISGGGDPIKDVEDGKEVVRQRTGMRPNTAVIGAS HHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECC AYATLKFHPKLANALGTQERKLITLEHLKALWGVEDIYIGEALAADGRGAMGDIWGDNVV EEEEEEECHHHHHHCCCCCCEEHHHHHHHHHHCCCHHEECHHHCCCCCCCCCCCCCCCEE LAYVAKPAAGSENDSDIPSFGYTLRKRNMPETDKYDGEGGKVRYVRHTDIYKLVVVGADA EEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCC GYLIADVA CEEEEECC >Mature Secondary Structure SDRLKKLRVVDPVLTSLARGYRNAQYIGESLFPIAPMDKEAGIIPQFGKEAFLLWETER CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCH AIRGKTNVMTADDANTMDVVLREHDLAYPVDYREQAESMFNEEAKAAKRVKDAIDQRREV HHCCCCCEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAVLAQNPKTYLPGAKVALSGTSKWISGGGDPIKDVEDGKEVVRQRTGMRPNTAVIGAS HHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECC AYATLKFHPKLANALGTQERKLITLEHLKALWGVEDIYIGEALAADGRGAMGDIWGDNVV EEEEEEECHHHHHHCCCCCCEEHHHHHHHHHHCCCHHEECHHHCCCCCCCCCCCCCCCEE LAYVAKPAAGSENDSDIPSFGYTLRKRNMPETDKYDGEGGKVRYVRHTDIYKLVVVGADA EEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCC GYLIADVA CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA