| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497590
Identifier: 34497590
GI number: 34497590
Start: 2318777
End: 2319916
Strand: Reverse
Name: 34497590
Synonym: CV_2135
Alternate gene names: NA
Gene position: 2319916-2318777 (Counterclockwise)
Preceding gene: 34497591
Following gene: 34497589
Centisome position: 48.83
GC content: 65.35
Gene sequence:
>1140_bases ATGAACGGCATGAACGCGACCAAACCCCTGCACGTATTCAAGTCCGGCCGCCAGACAGCGATGTCTGGCGCCGTGCTGGA CTTCTCCGAGTCCGATCTCGCGGCCTGCGCCCGCGCCTACGATCCGGCCCTGCATGAAGCGCCTATCGTCATCGGTCATC CCAAGCACGACGCGCCGGCCTATGGCTGGGTGAAGTCTCTCGCCGCCCGCGACATTGGCCTATTGGCCGAACCGCGCCAG GTGGACCCGGCCTTCGCCGAGCTGGTGGAAGCCGGCCGCTACAAGAAAATCTCCGCTTCCTTCTACCGTCCCGACTCGCC GAACAACCCGGTGCCTGGCGTCTACTACCTGCGCCATGTCGGCTTCCTGGGCGCGCAACCGCCTGCCGTGAAAGGGCTGC GTCCGGTGGAGTTCGGCGAGGCCGACGACGACGTGGTCGAGTTTGGCGACTGGAGCGACGTCCAGAACGCCAGCCTCTGG CGCCGCATGCGCGAGTGGCTGATCAGCCAGTTCGGCCTCGATGCCGCCGACAAAGTTATTCCCGATTACGCCGTGGCCAG CCTGGAGGACGACGCCCGCCAGGACAACTCCCCATCTTTTGCCGATCCGGCAGACCGTTCCGAACCTCAACCCAAGGAGA CCCCTGAAGTGACCCCTGAACAGCAAGCCGCCCTGGAGGCGGAAAACGCCAAGCTGAAGCAGCAGCTGGCGACGGCCGCG GCCGAGAAGAAGGCCACGGCCGCCGCGGCGCGCCACAGCGAACACCTGGCCTATGCCGAGCAGTTGATCGGCGAAGGCAA GCTGGCACCCAAGCACAAGGACGCCGTGGTGGCTTTCCTGGATTTTGCGGACGGCGAAACCTCGGTCGAATTCGGCGAGG GCGACGCCAAGCAACCGCTGGCCAGCGCGTTCAAAGGCTTCCTGGGCGACATGCCGAAGGTGATCGACTTCGGTGAGACC GCCACCAAGGACAAGACCAACCAGGGCGATCAGTGGACTCAGGACGGCTCGCTGGAGTTTGGCGAGCATGCCGATCCGGA GCGGCTGCAGTTGCACAACCGCGCTACCGCCCTGGCCGCCGAGAAGGGCGTTCCCTACGAGCAGGCCGTGCGCCAGCTGC TGAAATCCCGTTCCAACTGA
Upstream 100 bases:
>100_bases TTTCAGTAACCACCCTACCTCAAGCTCCGCGTTGACTCATTCGTATCTCGCCAAAAACTTTAAAGCCGATTAAACGTCCC ACCCGCTGACGCCGTTCACC
Downstream 100 bases:
>100_bases TAAGGAGCCGCCATGAGCGACCGTTTGAAGAAACTCCGGGTAGTCGACCCGGTACTGACCAGCCTGGCGCGCGGCTATCG CAACGCGCAATACATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MNGMNATKPLHVFKSGRQTAMSGAVLDFSESDLAACARAYDPALHEAPIVIGHPKHDAPAYGWVKSLAARDIGLLAEPRQ VDPAFAELVEAGRYKKISASFYRPDSPNNPVPGVYYLRHVGFLGAQPPAVKGLRPVEFGEADDDVVEFGDWSDVQNASLW RRMREWLISQFGLDAADKVIPDYAVASLEDDARQDNSPSFADPADRSEPQPKETPEVTPEQQAALEAENAKLKQQLATAA AEKKATAAAARHSEHLAYAEQLIGEGKLAPKHKDAVVAFLDFADGETSVEFGEGDAKQPLASAFKGFLGDMPKVIDFGET ATKDKTNQGDQWTQDGSLEFGEHADPERLQLHNRATALAAEKGVPYEQAVRQLLKSRSN
Sequences:
>Translated_379_residues MNGMNATKPLHVFKSGRQTAMSGAVLDFSESDLAACARAYDPALHEAPIVIGHPKHDAPAYGWVKSLAARDIGLLAEPRQ VDPAFAELVEAGRYKKISASFYRPDSPNNPVPGVYYLRHVGFLGAQPPAVKGLRPVEFGEADDDVVEFGDWSDVQNASLW RRMREWLISQFGLDAADKVIPDYAVASLEDDARQDNSPSFADPADRSEPQPKETPEVTPEQQAALEAENAKLKQQLATAA AEKKATAAAARHSEHLAYAEQLIGEGKLAPKHKDAVVAFLDFADGETSVEFGEGDAKQPLASAFKGFLGDMPKVIDFGET ATKDKTNQGDQWTQDGSLEFGEHADPERLQLHNRATALAAEKGVPYEQAVRQLLKSRSN >Mature_379_residues MNGMNATKPLHVFKSGRQTAMSGAVLDFSESDLAACARAYDPALHEAPIVIGHPKHDAPAYGWVKSLAARDIGLLAEPRQ VDPAFAELVEAGRYKKISASFYRPDSPNNPVPGVYYLRHVGFLGAQPPAVKGLRPVEFGEADDDVVEFGDWSDVQNASLW RRMREWLISQFGLDAADKVIPDYAVASLEDDARQDNSPSFADPADRSEPQPKETPEVTPEQQAALEAENAKLKQQLATAA AEKKATAAAARHSEHLAYAEQLIGEGKLAPKHKDAVVAFLDFADGETSVEFGEGDAKQPLASAFKGFLGDMPKVIDFGET ATKDKTNQGDQWTQDGSLEFGEHADPERLQLHNRATALAAEKGVPYEQAVRQLLKSRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41188; Mature: 41188
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGMNATKPLHVFKSGRQTAMSGAVLDFSESDLAACARAYDPALHEAPIVIGHPKHDAPA CCCCCCCCHHHHHHCCCHHHHCCCEECCCCHHHHHHHHHHCCHHHCCCEEEECCCCCCCH YGWVKSLAARDIGLLAEPRQVDPAFAELVEAGRYKKISASFYRPDSPNNPVPGVYYLRHV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEHHHEECCCCCCCCCCHHHHHHHH GFLGAQPPAVKGLRPVEFGEADDDVVEFGDWSDVQNASLWRRMREWLISQFGLDAADKVI HHCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC PDYAVASLEDDARQDNSPSFADPADRSEPQPKETPEVTPEQQAALEAENAKLKQQLATAA CCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AEKKATAAAARHSEHLAYAEQLIGEGKLAPKHKDAVVAFLDFADGETSVEFGEGDAKQPL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCHH ASAFKGFLGDMPKVIDFGETATKDKTNQGDQWTQDGSLEFGEHADPERLQLHNRATALAA HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EKGVPYEQAVRQLLKSRSN HCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNGMNATKPLHVFKSGRQTAMSGAVLDFSESDLAACARAYDPALHEAPIVIGHPKHDAPA CCCCCCCCHHHHHHCCCHHHHCCCEECCCCHHHHHHHHHHCCHHHCCCEEEECCCCCCCH YGWVKSLAARDIGLLAEPRQVDPAFAELVEAGRYKKISASFYRPDSPNNPVPGVYYLRHV HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEHHHEECCCCCCCCCCHHHHHHHH GFLGAQPPAVKGLRPVEFGEADDDVVEFGDWSDVQNASLWRRMREWLISQFGLDAADKVI HHCCCCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC PDYAVASLEDDARQDNSPSFADPADRSEPQPKETPEVTPEQQAALEAENAKLKQQLATAA CCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AEKKATAAAARHSEHLAYAEQLIGEGKLAPKHKDAVVAFLDFADGETSVEFGEGDAKQPL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCCCHH ASAFKGFLGDMPKVIDFGETATKDKTNQGDQWTQDGSLEFGEHADPERLQLHNRATALAA HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EKGVPYEQAVRQLLKSRSN HCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA