Click here to switch to the map view.

The map label for this gene is recO

Identifier: 34497524

GI number: 34497524

Start: 2255656

End: 2256393

Strand: Direct

Name: recO

Synonym: CV_2069

Alternate gene names: 34497524

Gene position: 2255656-2256393 (Clockwise)

Preceding gene: 34497523

Following gene: 34497525

Centisome position: 47.48

GC content: 71.68

Gene sequence:

>738_bases
ATGAGCCAGCCGGGCAGGGTGGACAAGCAGCCGGGCTATATCCTGCATACCCAGCCGTACCGCGAGACCAGCCTGCTGCT
GGAGGTGCTGAGCCGCGACCATGGCCGTTTCAGCCTGGTGGCGCGCAGCGCGCGCCGGCCCAGATCGGATCTGCGCGGCG
TGTTGCTGCCGTTCCAGCCGTTGACGCTGTCCTGGTTCGGCAAGGGCGAGTTGCGCACGCTGCACGCGGCGGATTGGGAT
GGCGGCGTGCGCGCGCTGACCGGCCTGCCGCTGGTCTGCGGCTTTTACCTGAACGAACTGATGATGAAGCTCACGGCGCG
GGACGATCCCGAGCCGCGGGCTTTTTCCGTTTACGACCGGGCGGTGCGGGAGCTGGCCGGCGGCGCGCCGCTGTCGACGG
CGCTGCGCCGCTACGAGCTCCGGCTGGCCCAGGTGCTGGGCTACGCGCCGGCGCTGAGCCGGGACAGCCGCGGCGAGGCC
ATCGCCGCCGATCGCCATTATCTGTGCCGCGACGCGGCGCTGCCGGAGCCGGACGAGCATCCGGAGCTGGCGCCGGTCGG
ACGAGTGGTCCGGCTGCCGGGCGAGGCGCTGCTGGCGCTGGACGCAGACGACTACCGCGAGCCGGCCACGCGCGGCCACG
CCCGCCTGCTGAGCCGGGTATGGCTGTCCGCGCTGCTGGGCGACGAGCCGCTGGCGTCGCGCCAATTATTGCAGGCCATC
CAGTCCCTTTCGGACTGA

Upstream 100 bases:

>100_bases
CCTGGCGCGCCCGGGTGGAGCTGTTGGCCAGGCAGCGCCTTGGGCGCGGCGCGGACGAAGCGGTTTCCATCCTGGTCCGC
CAGGCCGGAGGCGCGACGGC

Downstream 100 bases:

>100_bases
TGGCGGATAGACAAGGGGGATGGAAATGATTTTGTTGGGCGTAAACATCGATCACGTCGCCACGCTGCGCCAGGCGCGCG
GCACCCGCTATCCCAGCCCG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSQPGRVDKQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQPLTLSWFGKGELRTLHAADWD
GGVRALTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYDRAVRELAGGAPLSTALRRYELRLAQVLGYAPALSRDSRGEA
IAADRHYLCRDAALPEPDEHPELAPVGRVVRLPGEALLALDADDYREPATRGHARLLSRVWLSALLGDEPLASRQLLQAI
QSLSD

Sequences:

>Translated_245_residues
MSQPGRVDKQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQPLTLSWFGKGELRTLHAADWD
GGVRALTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYDRAVRELAGGAPLSTALRRYELRLAQVLGYAPALSRDSRGEA
IAADRHYLCRDAALPEPDEHPELAPVGRVVRLPGEALLALDADDYREPATRGHARLLSRVWLSALLGDEPLASRQLLQAI
QSLSD
>Mature_244_residues
SQPGRVDKQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQPLTLSWFGKGELRTLHAADWDG
GVRALTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYDRAVRELAGGAPLSTALRRYELRLAQVLGYAPALSRDSRGEAI
AADRHYLCRDAALPEPDEHPELAPVGRVVRLPGEALLALDADDYREPATRGHARLLSRVWLSALLGDEPLASRQLLQAIQ
SLSD

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=238, Percent_Identity=34.0336134453782, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_CHRVO (Q7NWC1)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901739.1
- ProteinModelPortal:   Q7NWC1
- GeneID:   2547186
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_2069
- NMPDR:   fig|243365.1.peg.2069
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- PhylomeDB:   Q7NWC1
- ProtClustDB:   PRK00085
- BioCyc:   CVIO243365:CV_2069-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27206; Mature: 27075

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPGRVDKQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQP
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCEEECCCCC
LTLSWFGKGELRTLHAADWDGGVRALTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYDR
CEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AVRELAGGAPLSTALRRYELRLAQVLGYAPALSRDSRGEAIAADRHYLCRDAALPEPDEH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCC
PELAPVGRVVRLPGEALLALDADDYREPATRGHARLLSRVWLSALLGDEPLASRQLLQAI
CCCCCCCCEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QSLSD
HHHCC
>Mature Secondary Structure 
SQPGRVDKQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSDLRGVLLPFQP
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCEEECCCCC
LTLSWFGKGELRTLHAADWDGGVRALTGLPLVCGFYLNELMMKLTARDDPEPRAFSVYDR
CEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AVRELAGGAPLSTALRRYELRLAQVLGYAPALSRDSRGEAIAADRHYLCRDAALPEPDEH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCC
PELAPVGRVVRLPGEALLALDADDYREPATRGHARLLSRVWLSALLGDEPLASRQLLQAI
CCCCCCCCEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QSLSD
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782