| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497493
Identifier: 34497493
GI number: 34497493
Start: 2221396
End: 2222859
Strand: Direct
Name: 34497493
Synonym: CV_2038
Alternate gene names: NA
Gene position: 2221396-2222859 (Clockwise)
Preceding gene: 34497492
Following gene: 34497498
Centisome position: 46.76
GC content: 65.23
Gene sequence:
>1464_bases ATGCGAGTAGAAAACCATTCCCCGTCTTTGTCGAAGTTGAACCCGCCGGAGGCCGGCTCCGGCGATCCGACGGCGATCGG ACGCCGCCTGAGCGGCATCCGCCGCGCGCCGCTGCCGCACGTCTCGGCCGGCAGCGACGGCGAGGCCGCTGCCGCCGGAA AAATCGGCGCCTTTCTGCGCAAGGCCGTGGCGGCGCAGTCCTATGGCCTGATGTTCGCGAACGGCAAGCTGTTCGAGGCG ACCGGCGACGCATTGGAAAAGCGCGGGCAATACGGCTTCAGCGCCCTGCAGCGGCTGGACGGCCTGTCCCGGCGCAATCT GGCGGCGGTTGAGGCCAGGCTGGGCGCGCTGGACTCCGCCGAGCGCGGCCTGAAGGAACGCATCATGACCGGCGCCTGGC ATTTCCGCCACCAGTCCAATGCGGCGCTGGACGACGGCAAGACGGCGGCGATCGCGTCCAATCATCTGCTGGCCCGGGAA TCTCGGTCCTCGGGCGGCAATACCTTCGCCGGCGACAAGGCGCTGTTGAGCAATCATGACTTCGTGTTCTTCGGGGTGGA GTTCTCCGGGCGGGGCAAGCAAGACAAGCCGTTGAACCATAAGCACAGCACGATGGACTTCGGCGCCAACGCCTACGTCG TCCCCGACACGCTGCCGGCGTGCCGCCATGGCTACCTGACGCTGACCGATCACTTCTTCAACCGGGTGCCCGGCGGGCGC GAGGCCGAGCATCAGGATTTCGTCGGCAGCTTCCCGCAGATGGGAGCGGAGACGGGGCGCTGGATTCACGAGGGCAAATA CCGTCAGAACGCCCCGATATTCAACTATCGCGACATGAAGGCCGCAGTGGCGTTGCACCTGATCGAATTTCTGCGCGACA GCAAGGACGCGGCCTTCAAGGCCTACGTGTTCGACCAGGCCATGCAGTCCGGCCAGGCGCTGGACCGGGTGCTGAACAGC GTCTTCCAGGCCGAGTTCCATATCCCGCGCCTGATGGCGACGACGGATTACGCCAAGCACCCGCTGCGTCCCATGCTGCT GAAGGAAGCGGTGGATTCGGTGAACCTGCCGGCTTTGTCCGGCCTGGTTTCGAGCAAGGGCGACGCGGTGACGGCGATGT GGCACGCCATCGATAAAGGCAAGGACGCGGTGGCGGCCCACCTGCTGGGCAACTGGCGTTTCGAGGCTGGGGATTTTGCC AGCGCGCCGCCGGGCTTTTACCACGAGCTGAACTATGCCTTGAGCGAGCATGGCGCCAGCGTCTATATCCTGGACCAGTT CCTGTCCCGCGGCTGGGCGGCGGTGAACGCGCCGTTCGAGCATGTGAACAGCGGCGAAACGATGCTGGACAACGCAGTCA AATACGGCAATCGGGAAATGGCGGCGGCGCTGATCAAGCACGGCGCCGACCGGAACCTGCTGTCTGAGTGGAATGGCGGA AAGCTGGACGCCTTGCTCGCCTAG
Upstream 100 bases:
>100_bases GAAGCCTTTGGCGGCCAGCTTTCTGGTGATTGGTTTTTGCAAGCGCCGGTTTGGGCATTTCATAAAAATGTACGCTCGAT GATATTGGAGCCGAGGCCAG
Downstream 100 bases:
>100_bases CGCGGCGAGGCTGGCGGCATGAAAAAACCGTCCCGGTCCGGGACGGTTTTTTTTTGACGGCAGGCGGGCGCCTATCCGTT CCGCAGCGCCCGCAGCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRVENHSPSLSKLNPPEAGSGDPTAIGRRLSGIRRAPLPHVSAGSDGEAAAAGKIGAFLRKAVAAQSYGLMFANGKLFEA TGDALEKRGQYGFSALQRLDGLSRRNLAAVEARLGALDSAERGLKERIMTGAWHFRHQSNAALDDGKTAAIASNHLLARE SRSSGGNTFAGDKALLSNHDFVFFGVEFSGRGKQDKPLNHKHSTMDFGANAYVVPDTLPACRHGYLTLTDHFFNRVPGGR EAEHQDFVGSFPQMGAETGRWIHEGKYRQNAPIFNYRDMKAAVALHLIEFLRDSKDAAFKAYVFDQAMQSGQALDRVLNS VFQAEFHIPRLMATTDYAKHPLRPMLLKEAVDSVNLPALSGLVSSKGDAVTAMWHAIDKGKDAVAAHLLGNWRFEAGDFA SAPPGFYHELNYALSEHGASVYILDQFLSRGWAAVNAPFEHVNSGETMLDNAVKYGNREMAAALIKHGADRNLLSEWNGG KLDALLA
Sequences:
>Translated_487_residues MRVENHSPSLSKLNPPEAGSGDPTAIGRRLSGIRRAPLPHVSAGSDGEAAAAGKIGAFLRKAVAAQSYGLMFANGKLFEA TGDALEKRGQYGFSALQRLDGLSRRNLAAVEARLGALDSAERGLKERIMTGAWHFRHQSNAALDDGKTAAIASNHLLARE SRSSGGNTFAGDKALLSNHDFVFFGVEFSGRGKQDKPLNHKHSTMDFGANAYVVPDTLPACRHGYLTLTDHFFNRVPGGR EAEHQDFVGSFPQMGAETGRWIHEGKYRQNAPIFNYRDMKAAVALHLIEFLRDSKDAAFKAYVFDQAMQSGQALDRVLNS VFQAEFHIPRLMATTDYAKHPLRPMLLKEAVDSVNLPALSGLVSSKGDAVTAMWHAIDKGKDAVAAHLLGNWRFEAGDFA SAPPGFYHELNYALSEHGASVYILDQFLSRGWAAVNAPFEHVNSGETMLDNAVKYGNREMAAALIKHGADRNLLSEWNGG KLDALLA >Mature_487_residues MRVENHSPSLSKLNPPEAGSGDPTAIGRRLSGIRRAPLPHVSAGSDGEAAAAGKIGAFLRKAVAAQSYGLMFANGKLFEA TGDALEKRGQYGFSALQRLDGLSRRNLAAVEARLGALDSAERGLKERIMTGAWHFRHQSNAALDDGKTAAIASNHLLARE SRSSGGNTFAGDKALLSNHDFVFFGVEFSGRGKQDKPLNHKHSTMDFGANAYVVPDTLPACRHGYLTLTDHFFNRVPGGR EAEHQDFVGSFPQMGAETGRWIHEGKYRQNAPIFNYRDMKAAVALHLIEFLRDSKDAAFKAYVFDQAMQSGQALDRVLNS VFQAEFHIPRLMATTDYAKHPLRPMLLKEAVDSVNLPALSGLVSSKGDAVTAMWHAIDKGKDAVAAHLLGNWRFEAGDFA SAPPGFYHELNYALSEHGASVYILDQFLSRGWAAVNAPFEHVNSGETMLDNAVKYGNREMAAALIKHGADRNLLSEWNGG KLDALLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52911; Mature: 52911
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVENHSPSLSKLNPPEAGSGDPTAIGRRLSGIRRAPLPHVSAGSDGEAAAAGKIGAFLR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH KAVAAQSYGLMFANGKLFEATGDALEKRGQYGFSALQRLDGLSRRNLAAVEARLGALDSA HHHHHHHCCEEEECCEEEECCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH ERGLKERIMTGAWHFRHQSNAALDDGKTAAIASNHLLARESRSSGGNTFAGDKALLSNHD HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHCHHHHHCCCCCCCCCCCCCHHHHCCCC FVFFGVEFSGRGKQDKPLNHKHSTMDFGANAYVVPDTLPACRHGYLTLTDHFFNRVPGGR EEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCCEEEEHHHHHHCCCCC EAEHQDFVGSFPQMGAETGRWIHEGKYRQNAPIFNYRDMKAAVALHLIEFLRDSKDAAFK CCCHHHHHCCCHHCCCHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH AYVFDQAMQSGQALDRVLNSVFQAEFHIPRLMATTDYAKHPLRPMLLKEAVDSVNLPALS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHCCCHHHHHHHHHHCCCCHHHH GLVSSKGDAVTAMWHAIDKGKDAVAAHLLGNWRFEAGDFASAPPGFYHELNYALSEHGAS HHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHCCCE VYILDQFLSRGWAAVNAPFEHVNSGETMLDNAVKYGNREMAAALIKHGADRNLLSEWNGG EEEHHHHHHCCCEEECCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHCCCC KLDALLA CEEHCCC >Mature Secondary Structure MRVENHSPSLSKLNPPEAGSGDPTAIGRRLSGIRRAPLPHVSAGSDGEAAAAGKIGAFLR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH KAVAAQSYGLMFANGKLFEATGDALEKRGQYGFSALQRLDGLSRRNLAAVEARLGALDSA HHHHHHHCCEEEECCEEEECCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH ERGLKERIMTGAWHFRHQSNAALDDGKTAAIASNHLLARESRSSGGNTFAGDKALLSNHD HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHCHHHHHCCCCCCCCCCCCCHHHHCCCC FVFFGVEFSGRGKQDKPLNHKHSTMDFGANAYVVPDTLPACRHGYLTLTDHFFNRVPGGR EEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHCCCEEEEHHHHHHCCCCC EAEHQDFVGSFPQMGAETGRWIHEGKYRQNAPIFNYRDMKAAVALHLIEFLRDSKDAAFK CCCHHHHHCCCHHCCCHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH AYVFDQAMQSGQALDRVLNSVFQAEFHIPRLMATTDYAKHPLRPMLLKEAVDSVNLPALS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHCCCHHHHHHHHHHCCCCHHHH GLVSSKGDAVTAMWHAIDKGKDAVAAHLLGNWRFEAGDFASAPPGFYHELNYALSEHGAS HHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHCCCE VYILDQFLSRGWAAVNAPFEHVNSGETMLDNAVKYGNREMAAALIKHGADRNLLSEWNGG EEEHHHHHHCCCEEECCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHCCCC KLDALLA CEEHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA