| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497458
Identifier: 34497458
GI number: 34497458
Start: 2184345
End: 2185418
Strand: Reverse
Name: 34497458
Synonym: CV_2003
Alternate gene names: NA
Gene position: 2185418-2184345 (Counterclockwise)
Preceding gene: 34497465
Following gene: 34497457
Centisome position: 46.0
GC content: 69.27
Gene sequence:
>1074_bases ATGACCGTCATTCATATCCGCCAACCCGCACTCGTGATCAAGGCTGGCGCCCGCGCGCGCCGATTGCTGCAACAGGGACT CCACCCCTCCCAGGTGGGCATCCTGCCCGGCGCGGCCGGCGGGCCCAAGGCGGTGGGGCTGACCGGACTGGACCAGGCGG TGTTCGGCTGGCTGGCCGGCGCGGCGCGCGAACGAGACCTGGTGGGCGCGTCGATAGGCGGCTGGCGCTTCGCCTGCGCG ATGCAGCCTGATCCAGCGCAGGCGCTGGCGCGGCTGGCCGAGCGCTACACCGAGGAGCATTACCATCCCGACGTCACCGT CGCCCAGATCACCGCGCAGACGCGGCGGATGCTGCATGACATCCTGGGACCGGATGGTTTCGAACACATCCTGGCGCATC CCCATCACCGGCTGAGCCTGCTGCTAGTGCAATCGCGCGGGCTGGCCAACCGCGAGGCCAAATCCTCGCTGCTGCCCGGG CTGGCGCTGGCGGCGGCGCTGAACGCCGTCTCCCGCCCGCTGATCCGCCATAGCTTCAGCCGAGTGATCTGCCACGATCC GCGCAGCGCGCTGCGCTTCCAGCCGACAGACGCCATTCCAACCCGGCTCTATCCGCTAGCCGCCGGCAATCTGGAACAGG CGCTGATGGGCACGGTGGCGATACCCGGCGTGCTGCACGGCGTGCAGTTGCCGGACGCGCCGGCGGCGATCTACCGCGAC GGCGGGCTCACCGACTACCACATTGATTTCCCCTTCGCCCACGGCGACGACATCGCGCTGTATCCGCACTTCACCGACCG CATCGTGCCCGGCTGGTTCGACAAGCCGCTGCCCTGGCGCAAGCCCGGCACCGCCAACCACGCCAACACCGTGCTGCTGG CGCCGTCGCGCGAATACCTGGCCGCCCTTCCCGGCCGCCACTTGCCGGACCGCAAGGATTTCCGCCGCTACCTGGGACGG GACGAATTGCGCCGCCAGCACTGGCGCGCCGCCACGGCGGAAAGCCAGCGGCTAGGCGACGCTTTTCTCGAGTGGCTGGA AAGGCCTGAGGCAATCAAAGTCCAAGCGCTGTAG
Upstream 100 bases:
>100_bases AGACTCCTGAACAGCGGCGCGCCGGAGCGCGCTTGAATTCGAAACGCCACAGGATATCAAACCCGACCACGCTTCGCCAT TTCGCCACTCTTATATCCTA
Downstream 100 bases:
>100_bases ATTCCATGCAAAGCGCAATGGACTGTGCCGGTTCCCGGGCCAGCCCCCCAAGCGATGGGATGCTTAAAATTTCATATATC ATATGATATATTGATTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTVIHIRQPALVIKAGARARRLLQQGLHPSQVGILPGAAGGPKAVGLTGLDQAVFGWLAGAARERDLVGASIGGWRFACA MQPDPAQALARLAERYTEEHYHPDVTVAQITAQTRRMLHDILGPDGFEHILAHPHHRLSLLLVQSRGLANREAKSSLLPG LALAAALNAVSRPLIRHSFSRVICHDPRSALRFQPTDAIPTRLYPLAAGNLEQALMGTVAIPGVLHGVQLPDAPAAIYRD GGLTDYHIDFPFAHGDDIALYPHFTDRIVPGWFDKPLPWRKPGTANHANTVLLAPSREYLAALPGRHLPDRKDFRRYLGR DELRRQHWRAATAESQRLGDAFLEWLERPEAIKVQAL
Sequences:
>Translated_357_residues MTVIHIRQPALVIKAGARARRLLQQGLHPSQVGILPGAAGGPKAVGLTGLDQAVFGWLAGAARERDLVGASIGGWRFACA MQPDPAQALARLAERYTEEHYHPDVTVAQITAQTRRMLHDILGPDGFEHILAHPHHRLSLLLVQSRGLANREAKSSLLPG LALAAALNAVSRPLIRHSFSRVICHDPRSALRFQPTDAIPTRLYPLAAGNLEQALMGTVAIPGVLHGVQLPDAPAAIYRD GGLTDYHIDFPFAHGDDIALYPHFTDRIVPGWFDKPLPWRKPGTANHANTVLLAPSREYLAALPGRHLPDRKDFRRYLGR DELRRQHWRAATAESQRLGDAFLEWLERPEAIKVQAL >Mature_356_residues TVIHIRQPALVIKAGARARRLLQQGLHPSQVGILPGAAGGPKAVGLTGLDQAVFGWLAGAARERDLVGASIGGWRFACAM QPDPAQALARLAERYTEEHYHPDVTVAQITAQTRRMLHDILGPDGFEHILAHPHHRLSLLLVQSRGLANREAKSSLLPGL ALAAALNAVSRPLIRHSFSRVICHDPRSALRFQPTDAIPTRLYPLAAGNLEQALMGTVAIPGVLHGVQLPDAPAAIYRDG GLTDYHIDFPFAHGDDIALYPHFTDRIVPGWFDKPLPWRKPGTANHANTVLLAPSREYLAALPGRHLPDRKDFRRYLGRD ELRRQHWRAATAESQRLGDAFLEWLERPEAIKVQAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39271; Mature: 39139
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIHIRQPALVIKAGARARRLLQQGLHPSQVGILPGAAGGPKAVGLTGLDQAVFGWLAG CEEEEECCCEEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH AARERDLVGASIGGWRFACAMQPDPAQALARLAERYTEEHYHPDVTVAQITAQTRRMLHD HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ILGPDGFEHILAHPHHRLSLLLVQSRGLANREAKSSLLPGLALAAALNAVSRPLIRHSFS HHCCCCHHHHHHCCCHHEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RVICHDPRSALRFQPTDAIPTRLYPLAAGNLEQALMGTVAIPGVLHGVQLPDAPAAIYRD HHEECCCHHHCEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEC GGLTDYHIDFPFAHGDDIALYPHFTDRIVPGWFDKPLPWRKPGTANHANTVLLAPSREYL CCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH AALPGRHLPDRKDFRRYLGRDELRRQHWRAATAESQRLGDAFLEWLERPEAIKVQAL HHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure TVIHIRQPALVIKAGARARRLLQQGLHPSQVGILPGAAGGPKAVGLTGLDQAVFGWLAG EEEEECCCEEEEECCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHH AARERDLVGASIGGWRFACAMQPDPAQALARLAERYTEEHYHPDVTVAQITAQTRRMLHD HHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ILGPDGFEHILAHPHHRLSLLLVQSRGLANREAKSSLLPGLALAAALNAVSRPLIRHSFS HHCCCCHHHHHHCCCHHEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RVICHDPRSALRFQPTDAIPTRLYPLAAGNLEQALMGTVAIPGVLHGVQLPDAPAAIYRD HHEECCCHHHCEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEC GGLTDYHIDFPFAHGDDIALYPHFTDRIVPGWFDKPLPWRKPGTANHANTVLLAPSREYL CCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH AALPGRHLPDRKDFRRYLGRDELRRQHWRAATAESQRLGDAFLEWLERPEAIKVQAL HHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA