| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497457
Identifier: 34497457
GI number: 34497457
Start: 2183175
End: 2183873
Strand: Reverse
Name: 34497457
Synonym: CV_2002
Alternate gene names: NA
Gene position: 2183873-2183175 (Counterclockwise)
Preceding gene: 34497458
Following gene: 34497452
Centisome position: 45.97
GC content: 55.36
Gene sequence:
>699_bases TTGGCGGGCTTTACCGGTAACACCCCGGCGGATAGAGCGCTGGCCGCCGGCTTCAATGGCGGCTCGGTCACGGAGAGCAT CCTTCACGCCTGGGATTGGTCGTCGGTTCCCATGGTGAATATGAGCAACAGTTCCGGGGTGCATTACGCGCTGGGATATC ATGAAGAGATAGTCAAAGCATTTGACTGGAACAATGCCATCGGACTGGGGATCATGTTTTGGACCAGCGCCGCGGGAGCC ACGGTTGCCAACTATGGCGTGGCCGGTCCGCTCCCGGCAGTAGAGCCCAATACGGTTCTCACCTATCCCTGCGAAGGAAG TAGCGGAACGGCCACAGGCAGCACCATGGAAATAGATAATCTCTACCCTGGCTATCCAGGAAATTTCGCAGGCCCTCCCA TCCTGGTCCAGACAAGCCCTTCTAGCAAAATCAAATTAACCAGCGCCAGCCTCACCAACGCAGACCGAGCAGAAATCCCT TACTATTTCGCACTGGTCAACCCGGAGTCCGATCCCAAGCATGTACTCAAGCCCTATCAGGCTTTAGTCGTGCCCCAGTC CAACTTGATGGCCAATACCCGTTACAATGCAAACATCACCGGCACCGTCAACGGCATGCCATTCAGCCGCAACTTCACAT TCAAAACCGGAACCGGCTCTGATCCAGACAGCTGGGCTTCCTATAGATCAGCCAATTAA
Upstream 100 bases:
>100_bases GGCTCAAAACGCGGCGCTGGACCGGGCAGCCCAAGCCCATGCCTTATACATGACCAACAATCCCCTCTGGGCACGAACAC CCCACACGGAAACCGCAGGC
Downstream 100 bases:
>100_bases GCGCCCCATAAACTCCGCTCAATACGCTCTGCGGAAAACAGCCAAAGCCATGCAATAGAGCGCCAATTGCAACACTCCAT AATCGCAAAACAAAACGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1-Like Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MAGFTGNTPADRALAAGFNGGSVTESILHAWDWSSVPMVNMSNSSGVHYALGYHEEIVKAFDWNNAIGLGIMFWTSAAGA TVANYGVAGPLPAVEPNTVLTYPCEGSSGTATGSTMEIDNLYPGYPGNFAGPPILVQTSPSSKIKLTSASLTNADRAEIP YYFALVNPESDPKHVLKPYQALVVPQSNLMANTRYNANITGTVNGMPFSRNFTFKTGTGSDPDSWASYRSAN
Sequences:
>Translated_232_residues MAGFTGNTPADRALAAGFNGGSVTESILHAWDWSSVPMVNMSNSSGVHYALGYHEEIVKAFDWNNAIGLGIMFWTSAAGA TVANYGVAGPLPAVEPNTVLTYPCEGSSGTATGSTMEIDNLYPGYPGNFAGPPILVQTSPSSKIKLTSASLTNADRAEIP YYFALVNPESDPKHVLKPYQALVVPQSNLMANTRYNANITGTVNGMPFSRNFTFKTGTGSDPDSWASYRSAN >Mature_231_residues AGFTGNTPADRALAAGFNGGSVTESILHAWDWSSVPMVNMSNSSGVHYALGYHEEIVKAFDWNNAIGLGIMFWTSAAGAT VANYGVAGPLPAVEPNTVLTYPCEGSSGTATGSTMEIDNLYPGYPGNFAGPPILVQTSPSSKIKLTSASLTNADRAEIPY YFALVNPESDPKHVLKPYQALVVPQSNLMANTRYNANITGTVNGMPFSRNFTFKTGTGSDPDSWASYRSAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24559; Mature: 24428
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFTGNTPADRALAAGFNGGSVTESILHAWDWSSVPMVNMSNSSGVHYALGYHEEIVKA CCCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEECHHHHHHHH FDWNNAIGLGIMFWTSAAGATVANYGVAGPLPAVEPNTVLTYPCEGSSGTATGSTMEIDN HCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECC LYPGYPGNFAGPPILVQTSPSSKIKLTSASLTNADRAEIPYYFALVNPESDPKHVLKPYQ CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHCCCE ALVVPQSNLMANTRYNANITGTVNGMPFSRNFTFKTGTGSDPDSWASYRSAN EEEECCCCCEECCEECCEEEEEECCCCCCCCEEEECCCCCCCHHHHHCCCCC >Mature Secondary Structure AGFTGNTPADRALAAGFNGGSVTESILHAWDWSSVPMVNMSNSSGVHYALGYHEEIVKA CCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEECHHHHHHHH FDWNNAIGLGIMFWTSAAGATVANYGVAGPLPAVEPNTVLTYPCEGSSGTATGSTMEIDN HCCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECC LYPGYPGNFAGPPILVQTSPSSKIKLTSASLTNADRAEIPYYFALVNPESDPKHVLKPYQ CCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHCCCE ALVVPQSNLMANTRYNANITGTVNGMPFSRNFTFKTGTGSDPDSWASYRSAN EEEECCCCCEECCEECCEEEEEECCCCCCCCEEEECCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA