| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497452
Identifier: 34497452
GI number: 34497452
Start: 2177108
End: 2177377
Strand: Reverse
Name: 34497452
Synonym: CV_1997
Alternate gene names: NA
Gene position: 2177377-2177108 (Counterclockwise)
Preceding gene: 34497457
Following gene: 34497446
Centisome position: 45.83
GC content: 62.59
Gene sequence:
>270_bases GTGAGTGCCATGCTTGACAGCAACTTCGAACTGGATGAGCCGTTGGAGGCCATCCTGCAGCGCCCCCTGACCTGGTTCGA AAAACAGCAGATCCAGGACAAACAGCAGGCTTCGGCAGACGAAGCCGTGGGCATGGTTGAGACCGAGGCCGACACTCACC CGCTGCGCCGCCGCCTGAAGGACATGGCGATGATGCAGGTAGTGCGCCTGGACCATCCGGAAGCCCGCCAGCCCAGAGGC GAAACGGTCCGGCAGGTCAAGATCGCCTGA
Upstream 100 bases:
>100_bases TTCCTACTTATAAACAAAACCCTACAACCCTCATATGATGTAAGGGCAATGTTCAGCCCGCCCAGGCCACCAGCCAAAAG CGGAGATCCCTTCTCAAGAG
Downstream 100 bases:
>100_bases CCCGCGCCTGACAAGCCAAGCCCCGCATGACGCGGGGCTTTGTTTTTCCAGCTTTCCAAACTGGCGATGCTACCTTCATA GACCCGCGATCGCCTTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSAMLDSNFELDEPLEAILQRPLTWFEKQQIQDKQQASADEAVGMVETEADTHPLRRRLKDMAMMQVVRLDHPEARQPRG ETVRQVKIA
Sequences:
>Translated_89_residues MSAMLDSNFELDEPLEAILQRPLTWFEKQQIQDKQQASADEAVGMVETEADTHPLRRRLKDMAMMQVVRLDHPEARQPRG ETVRQVKIA >Mature_88_residues SAMLDSNFELDEPLEAILQRPLTWFEKQQIQDKQQASADEAVGMVETEADTHPLRRRLKDMAMMQVVRLDHPEARQPRGE TVRQVKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10302; Mature: 10171
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMLDSNFELDEPLEAILQRPLTWFEKQQIQDKQQASADEAVGMVETEADTHPLRRRLK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH DMAMMQVVRLDHPEARQPRGETVRQVKIA HHHHHHHHHCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure SAMLDSNFELDEPLEAILQRPLTWFEKQQIQDKQQASADEAVGMVETEADTHPLRRRLK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH DMAMMQVVRLDHPEARQPRGETVRQVKIA HHHHHHHHHCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA