| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497438
Identifier: 34497438
GI number: 34497438
Start: 2161833
End: 2162537
Strand: Direct
Name: 34497438
Synonym: CV_1983
Alternate gene names: NA
Gene position: 2161833-2162537 (Clockwise)
Preceding gene: 34497437
Following gene: 34497439
Centisome position: 45.5
GC content: 65.25
Gene sequence:
>705_bases ATGCCGAACCGGATGGATTCGCCGGTTTCATCGAGGGAATGGGTAATCCATATGACAAGTATCACAGCCAAAGGAGTGGG AGGCCCTCCGCCTCGGCGACGATTCGCCGGCCTGGCGGGCGTCATCCTGTTCCACGCCGCGCTGATCTACGCGCTGGTGA CCGGTTTGGCCCAGGGGGTGGTCAAGGTGATCCAGCAGAAAGTGGAAGTGTCGGTGATCAGCGAACCGCCGCCGCCGCCA CCGCCGCCGCCGAAGATCGAGAAAGTGGTGCAGCAGCCGACGGCGCCGAAGCCGCAGGCCTACGTGCCGCCGGTGGTCAA TCCGCCGCCGATGGTGCAATCGCAGAACGCGATCCAATCGGTGACGGCCGATCCGACGCCGCAGCCGGCGCCGACTCCGG CCCCGGCGGTGGAAGCGCCGAAGGGCCCGGTTTCGGCCAAGGCCAACTGCAGCCACCTGGAAGCGCCGGAGTATCCGAGC AAGGCCCAGGAAGACGAAATCCAGGGCGTGGTGTCGGTGGTGTTCAGCGTGGGCGCCAGCGGCAAGTTCGGCGGCGAGGC CAGCTTCAATTTCAGCGGCGACATTCCGCCGCGCTACCGCAGCAGCTTCAAGTCGGCGATCACGGCCGCACTGCAGGGTT ACACCTGCCAGGCCAATTCCCAGCTGAAACAGGAATTCGGCTTCAAACTCGACTCTGGCGCCTAA
Upstream 100 bases:
>100_bases TTCTGTCATGACGGCGCATGTCCTTATGCGTTGAGAATGCGGCGCGGGAGGCGATCCCGCCCCGCCGCAGCGACAGGTTG GCGAATCCGTTCGGGCAAGC
Downstream 100 bases:
>100_bases GTCGCCCAGGGCATCTCAAGACACAAAGGAGCAAATACCATGACCAAGATCACTCGCGCATTTCTGGGCAAAGTCCTGGG CGCAGCCGGCCTGCTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPNRMDSPVSSREWVIHMTSITAKGVGGPPPRRRFAGLAGVILFHAALIYALVTGLAQGVVKVIQQKVEVSVISEPPPPP PPPPKIEKVVQQPTAPKPQAYVPPVVNPPPMVQSQNAIQSVTADPTPQPAPTPAPAVEAPKGPVSAKANCSHLEAPEYPS KAQEDEIQGVVSVVFSVGASGKFGGEASFNFSGDIPPRYRSSFKSAITAALQGYTCQANSQLKQEFGFKLDSGA
Sequences:
>Translated_234_residues MPNRMDSPVSSREWVIHMTSITAKGVGGPPPRRRFAGLAGVILFHAALIYALVTGLAQGVVKVIQQKVEVSVISEPPPPP PPPPKIEKVVQQPTAPKPQAYVPPVVNPPPMVQSQNAIQSVTADPTPQPAPTPAPAVEAPKGPVSAKANCSHLEAPEYPS KAQEDEIQGVVSVVFSVGASGKFGGEASFNFSGDIPPRYRSSFKSAITAALQGYTCQANSQLKQEFGFKLDSGA >Mature_233_residues PNRMDSPVSSREWVIHMTSITAKGVGGPPPRRRFAGLAGVILFHAALIYALVTGLAQGVVKVIQQKVEVSVISEPPPPPP PPPKIEKVVQQPTAPKPQAYVPPVVNPPPMVQSQNAIQSVTADPTPQPAPTPAPAVEAPKGPVSAKANCSHLEAPEYPSK AQEDEIQGVVSVVFSVGASGKFGGEASFNFSGDIPPRYRSSFKSAITAALQGYTCQANSQLKQEFGFKLDSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24577; Mature: 24446
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRMDSPVSSREWVIHMTSITAKGVGGPPPRRRFAGLAGVILFHAALIYALVTGLAQGV CCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKVIQQKVEVSVISEPPPPPPPPPKIEKVVQQPTAPKPQAYVPPVVNPPPMVQSQNAIQS HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VTADPTPQPAPTPAPAVEAPKGPVSAKANCSHLEAPEYPSKAQEDEIQGVVSVVFSVGAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GKFGGEASFNFSGDIPPRYRSSFKSAITAALQGYTCQANSQLKQEFGFKLDSGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure PNRMDSPVSSREWVIHMTSITAKGVGGPPPRRRFAGLAGVILFHAALIYALVTGLAQGV CCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKVIQQKVEVSVISEPPPPPPPPPKIEKVVQQPTAPKPQAYVPPVVNPPPMVQSQNAIQS HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VTADPTPQPAPTPAPAVEAPKGPVSAKANCSHLEAPEYPSKAQEDEIQGVVSVVFSVGAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC GKFGGEASFNFSGDIPPRYRSSFKSAITAALQGYTCQANSQLKQEFGFKLDSGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA