| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497432
Identifier: 34497432
GI number: 34497432
Start: 2152410
End: 2152775
Strand: Reverse
Name: 34497432
Synonym: CV_1977
Alternate gene names: NA
Gene position: 2152775-2152410 (Counterclockwise)
Preceding gene: 34497444
Following gene: 34497423
Centisome position: 45.31
GC content: 64.48
Gene sequence:
>366_bases ATGAAATCCGCAACATTCATGCTCGCGCTGGCCGCGCTGCTGCTGGCCGGCTGCGCCACCCAACAGGGCTACGCGCAAAA GGTCTACGCCTGGCAGGGGCGCGACGCCAACGAACTGCTGGCAACCTGGGGCGCGCCTACCGCCCAGATGACCATGCCCA ACGGCAAGCTGCTCTACACCTACCGCACCGCCTACAGCCAGGAAATGCCGATACAGGGCAACGGCTTCTACTACCCGTGG AGCGTCAGCGGCGGCGGATCGGTCTACTACAGCTGCACCACCAACTTCGTCGTCGATCCGCGCGACCACACCGTCTTGTC GGTCAGCTTCGACGGCAACGACTGCGTCGCGCCGACCCGCAAGTAA
Upstream 100 bases:
>100_bases ACACACCGACAAGATGACATCATCGTTAAATAAACAACAAACCCATGTCCGCCGCGGCCGCGCAATCCCGACAGGCCCGC GCCGCCGCAAGGAGAGCGCT
Downstream 100 bases:
>100_bases GGCCCCGTCGATGTTCCACATGACAGGAGCCGGCGATTGCCGGCTCCTTGTCTATTTGCCCCCGGCCTCGCTCAGGCCCA GCGCGCGGCGGCCGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKSATFMLALAALLLAGCATQQGYAQKVYAWQGRDANELLATWGAPTAQMTMPNGKLLYTYRTAYSQEMPIQGNGFYYPW SVSGGGSVYYSCTTNFVVDPRDHTVLSVSFDGNDCVAPTRK
Sequences:
>Translated_121_residues MKSATFMLALAALLLAGCATQQGYAQKVYAWQGRDANELLATWGAPTAQMTMPNGKLLYTYRTAYSQEMPIQGNGFYYPW SVSGGGSVYYSCTTNFVVDPRDHTVLSVSFDGNDCVAPTRK >Mature_121_residues MKSATFMLALAALLLAGCATQQGYAQKVYAWQGRDANELLATWGAPTAQMTMPNGKLLYTYRTAYSQEMPIQGNGFYYPW SVSGGGSVYYSCTTNFVVDPRDHTVLSVSFDGNDCVAPTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13227; Mature: 13227
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSATFMLALAALLLAGCATQQGYAQKVYAWQGRDANELLATWGAPTAQMTMPNGKLLYT CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHEEECCCCEEEEECCCCEEEEE YRTAYSQEMPIQGNGFYYPWSVSGGGSVYYSCTTNFVVDPRDHTVLSVSFDGNDCVAPTR EECCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCEEEEEEECCCCCCCCCC K C >Mature Secondary Structure MKSATFMLALAALLLAGCATQQGYAQKVYAWQGRDANELLATWGAPTAQMTMPNGKLLYT CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHEEECCCCEEEEECCCCEEEEE YRTAYSQEMPIQGNGFYYPWSVSGGGSVYYSCTTNFVVDPRDHTVLSVSFDGNDCVAPTR EECCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCEEEEEEECCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA