Click here to switch to the map view.

The map label for this gene is 34497418

Identifier: 34497418

GI number: 34497418

Start: 2135647

End: 2137170

Strand: Direct

Name: 34497418

Synonym: CV_1963

Alternate gene names: NA

Gene position: 2135647-2137170 (Clockwise)

Preceding gene: 34497417

Following gene: 34497421

Centisome position: 44.95

GC content: 65.94

Gene sequence:

>1524_bases
TTGCGCGCTCCCGGGTCCATTGCGAATGGGTTTTCCCCTATCCGTGACCATCCATCATCAAACAATATGAAGACCATTCC
GATGAGCACTTCCCGACTGATAGCCGCGCGCCGCGCCGGCATCGCCCTCTGCCTGCTGCTGCCCGCCGCCGCGCAGGCCC
AACCTGAACCGGCCGCCGATCCGCAAACCGTCCCGCAGTATCTGGCGCAGGCGAGGAGCGGCCAGCAACCCGCCAGGCTG
CTTGGATCGAGTTCGGAAGATGGCGTAACCATCAACGAGTACGGCTTCGTGTCCCAGCGCTGGCCGCAGAAGGGCAGCAC
GCTGACCAGCGACGCGCCGCAATGGGAGCACGTGTTGAAACTGGCGGTGCCGGCGGGGCGCAAGCCGGGCTCGCCGGCGC
TGCTGTACATCAGCGGTGGCAGCAATCATGCGGAAAAGGGCGCCCTGCCGCCGCGCGACCCGCTGCCGCTGGCCGAGCTG
GCGCGCGAGCTCGGCATCGCGGTGGCCGAACTGTATTACGTGCCCAACCAGAATCTGAAGCTGGATGGGCAGCCCTCGGG
GCGAGAGGACGCGCTGGTCGCCTATACCTGGCGCAAGAGCGTGGATCAACCGGAGGCCGAGCGCTTCAGCTCCCTGCATT
TGCCGATGACGCAGGCGGCGACGGCGGCGATGGACGTGATACAGGGCAGTCTGCCTGACGTTCGCGCCTTCGTGTTGTCC
GGCGGCTCCAAGCGGGGATGGACCAGCTGGCTGGCCGGACTCAACGATCAGCGTGTCCAGGCCATCGTGCCGGTGGCGGC
GGATTTCTGGAATGTCCGCGTCAACTTCACTCATGTGTACAACAGCTATGGCGGACAGTGGCCGGTGGCGCTGCGCGATT
ACGTCGCCAACCGCATCACGGCGGATGTGCTCAAGGGCGGCGCGGGTTTCGACGCCTTGTTGCGCTTCGAGGACGTGATC
AACTACCCGCAAGGCATGGTTCGTCTGAAAAAGTACATGCTGTCGGCGTCCGGAGACGATTTCGCGGTGCCGGACTCCGC
CTGGAGCTATTTGCCGGCGCTGAACGGCCCGATGCAGCTGCGTTATCTGCCCAATCAGTCCCACTACGTCGGCAGCAGGC
AGGTGAGCGAGGCCTTGCGCCAGTTCATGGGGCGCTGGCTGGCGGGCAAGCCCATGCCCGAGGCCCGCGTGGACGGGGAT
GAGCGCAGCGGACGGATCAGCGTCAGCACGCGGGAGGCGGTGAGCCGCGCCCGTTTGTGGCTGGCGCGCAATCCGCACGG
CCGCGATTTCCGCTTCAACTCCGGCATCCGCTACCAGGACCGGCCGATAGCAGGGCAGTGCCGGAGCGGCGAGTGCCGTT
TCGAGTTTACGCCGGACGCGACCCTGCCGGGCTGGCAGGCTTATTTCATCGAATTCGAGGGCAAGGATTTCACCTGGACC
ACGCCGCCGTTGATCTGGCCCAACCGCTATCCAGACGGTTCCAAAGTGCCTTTCGGCGCGCCGCGCCTGCAGCTGGGCGG
CTGA

Upstream 100 bases:

>100_bases
CCGTCCCTGGTTCGATGGAAAGCCCCGCCCGAAACGGCGGGGTTTTTTTATCCGCGGTAGCGGGCGGCTTTGGGCTGGCG
GCCGCCATATATGGAACGGA

Downstream 100 bases:

>100_bases
GGCCGCTGGAGCGGCGCTGCCGTTGCGTTCACGCCAGGTTCCGCAAATGCTCGCTGAGCTGCCCGGTCGCGCGCGCCGTT
TCCGGCCAGTCTACGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; Secreted Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRAPGSIANGFSPIRDHPSSNNMKTIPMSTSRLIAARRAGIALCLLLPAAAQAQPEPAADPQTVPQYLAQARSGQQPARL
LGSSSEDGVTINEYGFVSQRWPQKGSTLTSDAPQWEHVLKLAVPAGRKPGSPALLYISGGSNHAEKGALPPRDPLPLAEL
ARELGIAVAELYYVPNQNLKLDGQPSGREDALVAYTWRKSVDQPEAERFSSLHLPMTQAATAAMDVIQGSLPDVRAFVLS
GGSKRGWTSWLAGLNDQRVQAIVPVAADFWNVRVNFTHVYNSYGGQWPVALRDYVANRITADVLKGGAGFDALLRFEDVI
NYPQGMVRLKKYMLSASGDDFAVPDSAWSYLPALNGPMQLRYLPNQSHYVGSRQVSEALRQFMGRWLAGKPMPEARVDGD
ERSGRISVSTREAVSRARLWLARNPHGRDFRFNSGIRYQDRPIAGQCRSGECRFEFTPDATLPGWQAYFIEFEGKDFTWT
TPPLIWPNRYPDGSKVPFGAPRLQLGG

Sequences:

>Translated_507_residues
MRAPGSIANGFSPIRDHPSSNNMKTIPMSTSRLIAARRAGIALCLLLPAAAQAQPEPAADPQTVPQYLAQARSGQQPARL
LGSSSEDGVTINEYGFVSQRWPQKGSTLTSDAPQWEHVLKLAVPAGRKPGSPALLYISGGSNHAEKGALPPRDPLPLAEL
ARELGIAVAELYYVPNQNLKLDGQPSGREDALVAYTWRKSVDQPEAERFSSLHLPMTQAATAAMDVIQGSLPDVRAFVLS
GGSKRGWTSWLAGLNDQRVQAIVPVAADFWNVRVNFTHVYNSYGGQWPVALRDYVANRITADVLKGGAGFDALLRFEDVI
NYPQGMVRLKKYMLSASGDDFAVPDSAWSYLPALNGPMQLRYLPNQSHYVGSRQVSEALRQFMGRWLAGKPMPEARVDGD
ERSGRISVSTREAVSRARLWLARNPHGRDFRFNSGIRYQDRPIAGQCRSGECRFEFTPDATLPGWQAYFIEFEGKDFTWT
TPPLIWPNRYPDGSKVPFGAPRLQLGG
>Mature_507_residues
MRAPGSIANGFSPIRDHPSSNNMKTIPMSTSRLIAARRAGIALCLLLPAAAQAQPEPAADPQTVPQYLAQARSGQQPARL
LGSSSEDGVTINEYGFVSQRWPQKGSTLTSDAPQWEHVLKLAVPAGRKPGSPALLYISGGSNHAEKGALPPRDPLPLAEL
ARELGIAVAELYYVPNQNLKLDGQPSGREDALVAYTWRKSVDQPEAERFSSLHLPMTQAATAAMDVIQGSLPDVRAFVLS
GGSKRGWTSWLAGLNDQRVQAIVPVAADFWNVRVNFTHVYNSYGGQWPVALRDYVANRITADVLKGGAGFDALLRFEDVI
NYPQGMVRLKKYMLSASGDDFAVPDSAWSYLPALNGPMQLRYLPNQSHYVGSRQVSEALRQFMGRWLAGKPMPEARVDGD
ERSGRISVSTREAVSRARLWLARNPHGRDFRFNSGIRYQDRPIAGQCRSGECRFEFTPDATLPGWQAYFIEFEGKDFTWT
TPPLIWPNRYPDGSKVPFGAPRLQLGG

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55716; Mature: 55716

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPGSIANGFSPIRDHPSSNNMKTIPMSTSRLIAARRAGIALCLLLPAAAQAQPEPAAD
CCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHCCEEEEEECCHHHCCCCCCCCC
PQTVPQYLAQARSGQQPARLLGSSSEDGVTINEYGFVSQRWPQKGSTLTSDAPQWEHVLK
HHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHH
LAVPAGRKPGSPALLYISGGSNHAEKGALPPRDPLPLAELARELGIAVAELYYVPNQNLK
HHCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCEE
LDGQPSGREDALVAYTWRKSVDQPEAERFSSLHLPMTQAATAAMDVIQGSLPDVRAFVLS
ECCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHEEHEEC
GGSKRGWTSWLAGLNDQRVQAIVPVAADFWNVRVNFTHVYNSYGGQWPVALRDYVANRIT
CCCCCCHHHHHCCCCCCCEEEEEEEHHCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHH
ADVLKGGAGFDALLRFEDVINYPQGMVRLKKYMLSASGDDFAVPDSAWSYLPALNGPMQL
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEE
RYLPNQSHYVGSRQVSEALRQFMGRWLAGKPMPEARVDGDERSGRISVSTREAVSRARLW
EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
LARNPHGRDFRFNSGIRYQDRPIAGQCRSGECRFEFTPDATLPGWQAYFIEFEGKDFTWT
EEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEC
TPPLIWPNRYPDGSKVPFGAPRLQLGG
CCCEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAPGSIANGFSPIRDHPSSNNMKTIPMSTSRLIAARRAGIALCLLLPAAAQAQPEPAAD
CCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHCCEEEEEECCHHHCCCCCCCCC
PQTVPQYLAQARSGQQPARLLGSSSEDGVTINEYGFVSQRWPQKGSTLTSDAPQWEHVLK
HHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCHHHHHHH
LAVPAGRKPGSPALLYISGGSNHAEKGALPPRDPLPLAELARELGIAVAELYYVPNQNLK
HHCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCEE
LDGQPSGREDALVAYTWRKSVDQPEAERFSSLHLPMTQAATAAMDVIQGSLPDVRAFVLS
ECCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHEEHEEC
GGSKRGWTSWLAGLNDQRVQAIVPVAADFWNVRVNFTHVYNSYGGQWPVALRDYVANRIT
CCCCCCHHHHHCCCCCCCEEEEEEEHHCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHH
ADVLKGGAGFDALLRFEDVINYPQGMVRLKKYMLSASGDDFAVPDSAWSYLPALNGPMQL
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEE
RYLPNQSHYVGSRQVSEALRQFMGRWLAGKPMPEARVDGDERSGRISVSTREAVSRARLW
EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
LARNPHGRDFRFNSGIRYQDRPIAGQCRSGECRFEFTPDATLPGWQAYFIEFEGKDFTWT
EEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEC
TPPLIWPNRYPDGSKVPFGAPRLQLGG
CCCEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA