Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497415

Identifier: 34497415

GI number: 34497415

Start: 2132086

End: 2133561

Strand: Direct

Name: 34497415

Synonym: CV_1960

Alternate gene names: NA

Gene position: 2132086-2133561 (Clockwise)

Preceding gene: 34497414

Following gene: 34497417

Centisome position: 44.88

GC content: 64.36

Gene sequence:

>1476_bases
ATGAAGAGGTTACTGATCAGCGCGGCGATCGCGGCCCTGCCGGGCATGGCGATGGCCGACGCCAAGGCGGACGAGATCGC
CAGACTGAAGGCCCAGATGCAGAAGCTGCAGCAGCAGATGGCGGAGCTGCAGAAGGCGGTGGAGGCGGCGACGGCCCCGG
CCGGCGGCCAGAAGGCGGCCGCCGCGGCGGGCGGCGAGGACGCCAACGCCGAGTTGAAGGAGAGAGTGGCCAATATGGAA
TTGAAGGTGGACAAGCTCAACACCGCCTCCACCGATGGCCCGATCGCCGGCCTGAGCGTCACCGGCTATCTGGATCCCAC
CTACATCTACAACCGCAACAACAACAGCTCCGGCTTCCAGTTCCTGAACCACCAGAATGTCTACGCCTACAGCAACAGCA
CCTTCGGCGACGTCTATCTGGACATCAAGAAAACCTTCGGCGTAGGCCCCACCGCGCCCAGCGCCGAAATCACCATCATG
CCCAATCGCGGCAGCGGCAACACGCTGCTGGATGGAGGCAGCGGCAACAACATCATCAACACCGCGGTCATCAACTTCCC
GCTGTCCGATACCTGGACTTTCAACGCCGGGCTGATGAACAGCTTCGGCGGCTACGAGGTGCAGCAGTCCAACCAGATGC
TGACCCTGACCCACGGCCTGTTGTACGACTTCAGCGATCCGGGCAGCTATATCGGCGCCGGCTTCAACTGGAGCCACGAC
GTGTGGGCGTGGAAGTTCCTGCTGGCCAACGAGCAGTACCGCACCCATGCCAACCTGGCCAATACCGGCAACAACGCCTC
CACCGGCAATCCTCAGGTGAAGAGCAACAATACGCCGACCTTCACCGCGCGCGTCGACTACACCTGGAGCAGCGCGCTGG
ACCTGGGCGGCTCGTTCAACGCCGGCCGCCAGACCTTGCTGACCGGCAATGCCTGCGCGGGCGGCTTCGGCTATCTGTGC
GGCTCCGCCGATCCGTATTCCAATTACTTCTTCACCGAGGCTGACGCCAGCTACACGCTGGGCGACATCCAGTACAACGC
CGAGCTGGATTACGGCCAGCAGCAGAAGGCGGCCTGGAATGGCGGCAGCGCGCAGTGGTACGGCGTGTCGCTGCTGGGCC
ACCGCAAATGGATGACGGACTCGCTGGGCAAGATGGGCGCCACGCTGCGCTACGACTACCTGAACAACAGCAAGAACGGC
GGCGGCGGCGGCGGGGTGGCGCTGGGTTCCGGCGGCTTCGACGGCGTCAACGGCTTCGGCGTCGATCCGGCCTGCCTGGC
CAGCGGTGCCGCCGACTGCAAGGGCGCCAACCGCATGGCGCTGACCGCCGCTCTGTTGTTCTTCCCGACCGACCAGTTCA
CGCTGAAGTTCGAATACCGGCACGACTGGGCCAGCCAGGCCGTGTTCCAGCGCAACGACGGCAGCATGAAGAAGAGCAAC
GACATGCTGGGCGCGCAGGCGGTCTACACCTTCTGA

Upstream 100 bases:

>100_bases
ACGCGCAAGCGGGAAAAGGAGATGAGGCTGGCTTTCGCCAACGGTTGAGATCGAATGCGGTGAAAACGACAACGGCAGTG
CGGCACAAGGAGAAATGACG

Downstream 100 bases:

>100_bases
TTGTTTTCCTCTCCCTTGGGCAGCGGCCGTCCGCTGCCTTTTTTATTTTCGCCGCTTCCCGATAAATGCCTATATCATTC
CCGGCCGCTGGCGGCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAAAAAGGEDANAELKERVANME
LKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQFLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIM
PNRGSGNTLLDGGSGNNIINTAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD
VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFNAGRQTLLTGNACAGGFGYLC
GSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWNGGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNG
GGGGGVALGSGGFDGVNGFGVDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN
DMLGAQAVYTF

Sequences:

>Translated_491_residues
MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAAAAAGGEDANAELKERVANME
LKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQFLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIM
PNRGSGNTLLDGGSGNNIINTAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD
VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFNAGRQTLLTGNACAGGFGYLC
GSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWNGGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNG
GGGGGVALGSGGFDGVNGFGVDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN
DMLGAQAVYTF
>Mature_491_residues
MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAAAAAGGEDANAELKERVANME
LKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQFLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIM
PNRGSGNTLLDGGSGNNIINTAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD
VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFNAGRQTLLTGNACAGGFGYLC
GSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWNGGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNG
GGGGGVALGSGGFDGVNGFGVDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN
DMLGAQAVYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52381; Mature: 52381

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAA
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
AAAGGEDANAELKERVANMELKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQ
HCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCEE
FLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIMPNRGSGNTLLDGGSGNNIIN
EECCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEE
TAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD
EEEEECCCCCCEEECCCHHCCCCCEEEECCCCEEEEEECEEEEECCCCCEEECCCCCCCC
VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFN
CEEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEHHHHCCCCCCC
AGRQTLLTGNACAGGFGYLCGSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWN
CCCEEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHCCCC
GGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNGGGGGGVALGSGGFDGVNGFG
CCCCEEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCC
VDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN
CCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHHHEECCCCCCCCCC
DMLGAQAVYTF
CCCCCEEEEEC
>Mature Secondary Structure
MKRLLISAAIAALPGMAMADAKADEIARLKAQMQKLQQQMAELQKAVEAATAPAGGQKAA
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
AAAGGEDANAELKERVANMELKVDKLNTASTDGPIAGLSVTGYLDPTYIYNRNNNSSGFQ
HCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCEE
FLNHQNVYAYSNSTFGDVYLDIKKTFGVGPTAPSAEITIMPNRGSGNTLLDGGSGNNIIN
EECCCEEEEECCCCCCEEEEEEEHHCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEE
TAVINFPLSDTWTFNAGLMNSFGGYEVQQSNQMLTLTHGLLYDFSDPGSYIGAGFNWSHD
EEEEECCCCCCEEECCCHHCCCCCEEEECCCCEEEEEECEEEEECCCCCEEECCCCCCCC
VWAWKFLLANEQYRTHANLANTGNNASTGNPQVKSNNTPTFTARVDYTWSSALDLGGSFN
CEEEEEEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEHHHHCCCCCCC
AGRQTLLTGNACAGGFGYLCGSADPYSNYFFTEADASYTLGDIQYNAELDYGQQQKAAWN
CCCEEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCHHCCCC
GGSAQWYGVSLLGHRKWMTDSLGKMGATLRYDYLNNSKNGGGGGGVALGSGGFDGVNGFG
CCCCEEEEEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCC
VDPACLASGAADCKGANRMALTAALLFFPTDQFTLKFEYRHDWASQAVFQRNDGSMKKSN
CCHHHHHCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHHHEECCCCCCCCCC
DMLGAQAVYTF
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA