| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497407
Identifier: 34497407
GI number: 34497407
Start: 2125232
End: 2126059
Strand: Direct
Name: 34497407
Synonym: CV_1952
Alternate gene names: NA
Gene position: 2125232-2126059 (Clockwise)
Preceding gene: 34497406
Following gene: 34497408
Centisome position: 44.73
GC content: 67.87
Gene sequence:
>828_bases ATGAACCACGCACAATCGCTTTATCCGCTGATCGAAAGGGCGCTGCTGTGCCCGGTGCTGGAAGACAAGCTGGCGCTGGC CGAGCGCCTGCATCGCGACTGGCGGGCCGGGATGCTGGCCCGGCTGGCGTCTCCCGCTCCTTATCCTTTGCCCGAGCCGG GGCGGCCCGAGCGGCCGGAGCTGGTGCACCCTGCCCGCGTGCCCAAGCGCAGCCTGTCCACCCGCCGCGGCCACGGCGCG CTGCTGCACGCGATCGCCCACATCGAGTTCAACGCGGTCAACCTGGCGCTGGACGCCGCCTGGCGTTTTCGCGACATGCC GGACGAATTCGTCGACGATTGGCTGAAGGTGGCGGCCGAGGAGGCCGGGCATTTCCGCCTGCTGCAGGGACGCTTGGCCG AACTGGGCTTTTCCTATGGCGATTTCCCCGCGCATGACGGCCTGTGGGCCATGTGCCGCAAAACCGATCGCGACGCGATG GTCAGGATGGCGCTGGTGCCCCGGGTGCTGGAGGCGAGGGGGCTGGATGTCACGCCCGGCATCCAGCGCAGGCTGGCTGG CATAGGCGATCATGCCAGCGTGGCGGTGCTGGACGTCATCCTGCGCGACGAGGTCGGCCATGTGCTGATAGGAAACCGCT GGTTCGTCCGGCTGTGCCGCGAAAGAGGGCTGGAACCCCAGGCCACTTTCCGCGGTCTGCTCGAACAGCACGCGATGCAG CTGCATCCGGGCGATTACAATCTGGACGCCCGCGCCGCCGCCGGTTTTTTCGCCGACGAGCTGGAAGCGCTGGCGCGTCT GACCGAATCCGTCTCAGACGGCCGTTGA
Upstream 100 bases:
>100_bases CCAGGGCGAAACGGTCGCCGAATAGCGCCGCCCGCCATTCGGGCCAGTCCATTCCGCCCAGGCTTGGCCTGGATGCGGGC CGGGCTTAGAATCCGCTCTC
Downstream 100 bases:
>100_bases ATCTTCATCGAAGCAGATATTCATGATCAAGCTGATTTATCGCATGCGCGACAACCGCAGGCTGGCCACCGCCATGCTGC TGCTGTCCACGCTGGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNHAQSLYPLIERALLCPVLEDKLALAERLHRDWRAGMLARLASPAPYPLPEPGRPERPELVHPARVPKRSLSTRRGHGA LLHAIAHIEFNAVNLALDAAWRFRDMPDEFVDDWLKVAAEEAGHFRLLQGRLAELGFSYGDFPAHDGLWAMCRKTDRDAM VRMALVPRVLEARGLDVTPGIQRRLAGIGDHASVAVLDVILRDEVGHVLIGNRWFVRLCRERGLEPQATFRGLLEQHAMQ LHPGDYNLDARAAAGFFADELEALARLTESVSDGR
Sequences:
>Translated_275_residues MNHAQSLYPLIERALLCPVLEDKLALAERLHRDWRAGMLARLASPAPYPLPEPGRPERPELVHPARVPKRSLSTRRGHGA LLHAIAHIEFNAVNLALDAAWRFRDMPDEFVDDWLKVAAEEAGHFRLLQGRLAELGFSYGDFPAHDGLWAMCRKTDRDAM VRMALVPRVLEARGLDVTPGIQRRLAGIGDHASVAVLDVILRDEVGHVLIGNRWFVRLCRERGLEPQATFRGLLEQHAMQ LHPGDYNLDARAAAGFFADELEALARLTESVSDGR >Mature_275_residues MNHAQSLYPLIERALLCPVLEDKLALAERLHRDWRAGMLARLASPAPYPLPEPGRPERPELVHPARVPKRSLSTRRGHGA LLHAIAHIEFNAVNLALDAAWRFRDMPDEFVDDWLKVAAEEAGHFRLLQGRLAELGFSYGDFPAHDGLWAMCRKTDRDAM VRMALVPRVLEARGLDVTPGIQRRLAGIGDHASVAVLDVILRDEVGHVLIGNRWFVRLCRERGLEPQATFRGLLEQHAMQ LHPGDYNLDARAAAGFFADELEALARLTESVSDGR
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 30796; Mature: 30796
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHAQSLYPLIERALLCPVLEDKLALAERLHRDWRAGMLARLASPAPYPLPEPGRPERPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC LVHPARVPKRSLSTRRGHGALLHAIAHIEFNAVNLALDAAWRFRDMPDEFVDDWLKVAAE CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EAGHFRLLQGRLAELGFSYGDFPAHDGLWAMCRKTDRDAMVRMALVPRVLEARGLDVTPG HCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHH IQRRLAGIGDHASVAVLDVILRDEVGHVLIGNRWFVRLCRERGLEPQATFRGLLEQHAMQ HHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH LHPGDYNLDARAAAGFFADELEALARLTESVSDGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNHAQSLYPLIERALLCPVLEDKLALAERLHRDWRAGMLARLASPAPYPLPEPGRPERPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC LVHPARVPKRSLSTRRGHGALLHAIAHIEFNAVNLALDAAWRFRDMPDEFVDDWLKVAAE CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EAGHFRLLQGRLAELGFSYGDFPAHDGLWAMCRKTDRDAMVRMALVPRVLEARGLDVTPG HCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHH IQRRLAGIGDHASVAVLDVILRDEVGHVLIGNRWFVRLCRERGLEPQATFRGLLEQHAMQ HHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH LHPGDYNLDARAAAGFFADELEALARLTESVSDGR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]