| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is bvgS [H]
Identifier: 34497406
GI number: 34497406
Start: 2123468
End: 2125156
Strand: Direct
Name: bvgS [H]
Synonym: CV_1951
Alternate gene names: 34497406
Gene position: 2123468-2125156 (Clockwise)
Preceding gene: 34497403
Following gene: 34497407
Centisome position: 44.69
GC content: 65.6
Gene sequence:
>1689_bases CTGGCCTGTCTCGACATCACCGAGCGCAAGATGGCCGAATTCGAGCTGAGGATGGCGCGCGACCAGGCCAACGCCGCCAA CCGCGCCAAGAGCGCCTTCCTGGCGACGATGAGCCATGAAATCCGCACGCCGATGAACGGCGTGCTGGGGATGCTGGAAC TGCTGGCGATGACCCGGCTGGACGCTGAGCAGAGCGACACCGTCGCCACCATCCAGGATTCGGCCAACACGCTGCTGCGA TTGATAGACGACATCCTGGATTTCTCCAAGATCGAGGCGGACCGGCTGGAGATCGTGCCCACCCGCACCGCGATACGGCC TTTCATGGACAGCGTGCGCAGCCTCTACCACGAGAACGCCAGCAAGAAGGGCCTGGAGCTGACGCTGACGCTGGACGACA AGCTGGCACCGACGCTGGTCATCGACCCGCTGCGGGTGAGGCAGATCCTGCAGAACTTCATCAGCAACGCCATCAAGTTC ACTGCCAGCGGCAAGGTGGACATCCGGGTCAAGGTGATGGATACCGTGGCCAATTACCAGGTGCTGAGCTTCGAGGTCGA GGACACCGGCATCGGCATGTCCCAGGAGCAACTGAGCAAGCTGTTCCAGCCGTTCACCCAGGCGGATTCCGAAACCACCC GCCGTTTCGGCGGAACGGGGCTGGGGCTGGCGATCTGCCGGCGGCTGGCCGGCCTGATGGGCGGCCACGTGGAGATGGAG AGCGAGCAGGGCAAGGGCAGCTGCGCCAGGCTGTTGCTGGAGGTGGAGTGGCTGGCCGAACAGGTGGAGCCGGTCATGCT GCCGGAGCAGCGCGTGCCGCTGGAGACCGTGATCGCCGCCGCTCAGGCCGACAAGGAGATCAGCCTGGGCAGCGGACTGT TTCCCATTCTGTTCGCCGAGGACAACCCCACCAATCGCAAGCTGACGCTCAAGCAGCTGGAAAAGCTCGGCTACCCGGCG GACTGGGCCGAGGACGGCGACCGGGCCTTCAGCAAATGGCTGTCCGGACGTTACTCGCTGATTCTGACCGACTGCCACAT GCCCGGAATCGACGGCTACCAACTGGCGCGGCTGGTGCGCGCCCATGAGGAGTCGCATCCCGAGCGCGGCCGCATTCCCA TCGTCGCCTGCACCGCCAACGCGGCCAAGGAGGAGGTGGACAAGACGCGCGAAGCCGGCATGGACGATTTCCTGACCAAG CCGCTGTCCATCCTGGCGCTTGAAGCGACATTGCGAAAATGGATGGGCTCCATGTCCGGGTCTCCGCCGGACGGCGCCGC CGCGTCGTCCGACGTCCCTGGCAAGGCCGAGGTCGCGGAGCCGCCGCCTCTGGATGCGCCGCGGATCCCGGTGGACCGAA GCGTGCTCGAGGTGTACAGCAATGGCGAGTTGAGCGTGGAGCTGGAGATCCTGCGCGAATTCCAGACCGGCAACAGCGAG GACGTGGCCGAACTGCGCGCGGCGATGGCCGCGGAGGATGCGGAGCGCATCGGCTTTTCCGCGCACCGCATCAAGGGCGC CAGCCGCATGGTGGGAGCCAACGGCATGGGCGACGCCGCCGAGGCGGTGGAGAAGGCGGGCAAGGCGCGCGACCTGGAGC TGGCCAGGAAAAAGATGGTTTTCTTCGAAGACCAGCTGGCCGTCTTCGAAAACTGGCTGGCCAGCCAGGGCGAAACGGTC GCCGAATAG
Upstream 100 bases:
>100_bases CCATTGCGAGCTGGAGTGCCTGACCGGCACCGGCCGGCCGATCTGGGTGCTGTTCGAGGGGCAGCTGCTGTTCCCCGACG CCAGCGAGTCGGTGATCATC
Downstream 100 bases:
>100_bases CGCCGCCCGCCATTCGGGCCAGTCCATTCCGCCCAGGCTTGGCCTGGATGCGGGCCGGGCTTAGAATCCGCTCTCATGAA CCACGCACAATCGCTTTATC
Product: two-component sensor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MACLDITERKMAEFELRMARDQANAANRAKSAFLATMSHEIRTPMNGVLGMLELLAMTRLDAEQSDTVATIQDSANTLLR LIDDILDFSKIEADRLEIVPTRTAIRPFMDSVRSLYHENASKKGLELTLTLDDKLAPTLVIDPLRVRQILQNFISNAIKF TASGKVDIRVKVMDTVANYQVLSFEVEDTGIGMSQEQLSKLFQPFTQADSETTRRFGGTGLGLAICRRLAGLMGGHVEME SEQGKGSCARLLLEVEWLAEQVEPVMLPEQRVPLETVIAAAQADKEISLGSGLFPILFAEDNPTNRKLTLKQLEKLGYPA DWAEDGDRAFSKWLSGRYSLILTDCHMPGIDGYQLARLVRAHEESHPERGRIPIVACTANAAKEEVDKTREAGMDDFLTK PLSILALEATLRKWMGSMSGSPPDGAAASSDVPGKAEVAEPPPLDAPRIPVDRSVLEVYSNGELSVELEILREFQTGNSE DVAELRAAMAAEDAERIGFSAHRIKGASRMVGANGMGDAAEAVEKAGKARDLELARKKMVFFEDQLAVFENWLASQGETV AE
Sequences:
>Translated_562_residues MACLDITERKMAEFELRMARDQANAANRAKSAFLATMSHEIRTPMNGVLGMLELLAMTRLDAEQSDTVATIQDSANTLLR LIDDILDFSKIEADRLEIVPTRTAIRPFMDSVRSLYHENASKKGLELTLTLDDKLAPTLVIDPLRVRQILQNFISNAIKF TASGKVDIRVKVMDTVANYQVLSFEVEDTGIGMSQEQLSKLFQPFTQADSETTRRFGGTGLGLAICRRLAGLMGGHVEME SEQGKGSCARLLLEVEWLAEQVEPVMLPEQRVPLETVIAAAQADKEISLGSGLFPILFAEDNPTNRKLTLKQLEKLGYPA DWAEDGDRAFSKWLSGRYSLILTDCHMPGIDGYQLARLVRAHEESHPERGRIPIVACTANAAKEEVDKTREAGMDDFLTK PLSILALEATLRKWMGSMSGSPPDGAAASSDVPGKAEVAEPPPLDAPRIPVDRSVLEVYSNGELSVELEILREFQTGNSE DVAELRAAMAAEDAERIGFSAHRIKGASRMVGANGMGDAAEAVEKAGKARDLELARKKMVFFEDQLAVFENWLASQGETV AE >Mature_561_residues ACLDITERKMAEFELRMARDQANAANRAKSAFLATMSHEIRTPMNGVLGMLELLAMTRLDAEQSDTVATIQDSANTLLRL IDDILDFSKIEADRLEIVPTRTAIRPFMDSVRSLYHENASKKGLELTLTLDDKLAPTLVIDPLRVRQILQNFISNAIKFT ASGKVDIRVKVMDTVANYQVLSFEVEDTGIGMSQEQLSKLFQPFTQADSETTRRFGGTGLGLAICRRLAGLMGGHVEMES EQGKGSCARLLLEVEWLAEQVEPVMLPEQRVPLETVIAAAQADKEISLGSGLFPILFAEDNPTNRKLTLKQLEKLGYPAD WAEDGDRAFSKWLSGRYSLILTDCHMPGIDGYQLARLVRAHEESHPERGRIPIVACTANAAKEEVDKTREAGMDDFLTKP LSILALEATLRKWMGSMSGSPPDGAAASSDVPGKAEVAEPPPLDAPRIPVDRSVLEVYSNGELSVELEILREFQTGNSED VAELRAAMAAEDAERIGFSAHRIKGASRMVGANGMGDAAEAVEKAGKARDLELARKKMVFFEDQLAVFENWLASQGETVA E
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=521, Percent_Identity=33.0134357005758, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI1788713, Length=555, Percent_Identity=30.8108108108108, Blast_Score=216, Evalue=3e-57, Organism=Escherichia coli, GI1789149, Length=241, Percent_Identity=43.1535269709544, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=38.5245901639344, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI87081816, Length=347, Percent_Identity=34.2939481268012, Blast_Score=169, Evalue=6e-43, Organism=Escherichia coli, GI1788393, Length=208, Percent_Identity=30.2884615384615, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1786600, Length=236, Percent_Identity=29.2372881355932, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87082128, Length=228, Percent_Identity=27.6315789473684, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=28.6995515695067, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786783, Length=217, Percent_Identity=27.6497695852535, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=26.530612244898, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788549, Length=253, Percent_Identity=24.5059288537549, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1788191, Length=132, Percent_Identity=31.0606060606061, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790346, Length=199, Percent_Identity=27.6381909547739, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789808, Length=229, Percent_Identity=25.764192139738, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=95, Percent_Identity=40, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61682; Mature: 61551
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACLDITERKMAEFELRMARDQANAANRAKSAFLATMSHEIRTPMNGVLGMLELLAMTRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC DAEQSDTVATIQDSANTLLRLIDDILDFSKIEADRLEIVPTRTAIRPFMDSVRSLYHENA CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCC SKKGLELTLTLDDKLAPTLVIDPLRVRQILQNFISNAIKFTASGKVDIRVKVMDTVANYQ CCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEHHCCEE VLSFEVEDTGIGMSQEQLSKLFQPFTQADSETTRRFGGTGLGLAICRRLAGLMGGHVEME EEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEC SEQGKGSCARLLLEVEWLAEQVEPVMLPEQRVPLETVIAAAQADKEISLGSGLFPILFAE CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEC DNPTNRKLTLKQLEKLGYPADWAEDGDRAFSKWLSGRYSLILTDCHMPGIDGYQLARLVR CCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH AHEESHPERGRIPIVACTANAAKEEVDKTREAGMDDFLTKPLSILALEATLRKWMGSMSG HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCC SPPDGAAASSDVPGKAEVAEPPPLDAPRIPVDRSVLEVYSNGELSVELEILREFQTGNSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHCCCCH DVAELRAAMAAEDAERIGFSAHRIKGASRMVGANGMGDAAEAVEKAGKARDLELARKKMV HHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH FFEDQLAVFENWLASQGETVAE HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ACLDITERKMAEFELRMARDQANAANRAKSAFLATMSHEIRTPMNGVLGMLELLAMTRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC DAEQSDTVATIQDSANTLLRLIDDILDFSKIEADRLEIVPTRTAIRPFMDSVRSLYHENA CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCC SKKGLELTLTLDDKLAPTLVIDPLRVRQILQNFISNAIKFTASGKVDIRVKVMDTVANYQ CCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEEHHCCEE VLSFEVEDTGIGMSQEQLSKLFQPFTQADSETTRRFGGTGLGLAICRRLAGLMGGHVEME EEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEC SEQGKGSCARLLLEVEWLAEQVEPVMLPEQRVPLETVIAAAQADKEISLGSGLFPILFAE CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEC DNPTNRKLTLKQLEKLGYPADWAEDGDRAFSKWLSGRYSLILTDCHMPGIDGYQLARLVR CCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH AHEESHPERGRIPIVACTANAAKEEVDKTREAGMDDFLTKPLSILALEATLRKWMGSMSG HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCC SPPDGAAASSDVPGKAEVAEPPPLDAPRIPVDRSVLEVYSNGELSVELEILREFQTGNSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHHCCCCH DVAELRAAMAAEDAERIGFSAHRIKGASRMVGANGMGDAAEAVEKAGKARDLELARKKMV HHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH FFEDQLAVFENWLASQGETVAE HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]