Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497361

Identifier: 34497361

GI number: 34497361

Start: 2070823

End: 2071605

Strand: Direct

Name: 34497361

Synonym: CV_1906

Alternate gene names: NA

Gene position: 2070823-2071605 (Clockwise)

Preceding gene: 34497360

Following gene: 34497362

Centisome position: 43.59

GC content: 64.11

Gene sequence:

>783_bases
TTGCCGATGTTTCAGGTTGACGAGCTCCGGGAATGGTTCATACCATTCCATCAACACCTATCGGTAATTGCCATGAATAC
AGTCCGCCGTATGCCTCGCCTCGCCTTGCTTGCCCTGATGGCCGGTTTGACCGCCTGCGCCACGCCCGCCCCGCAGAAAT
CCTCGATGGGCGCGCCGATGCCGATGAAGGAGAGCGGCTCGGTCCCGTCGGGAGTCGGCTACGTCGGCTCCGGCGACGAG
GCCGCCAGCGGCGAGGAGGTGAAGGTGGTGGTGAAGGAAGTGAATCCCTTCCGGCCCATCGTCGTCCGGGTGACCGGCTC
CGGCGCCGCGCCTTACACCAACAGCCTGACGCCGTCGCAGCGCAAGCTGCTGGCGATGCGGGCCGCCCGGCTGGACGCTT
TCCGCTCGATAGCGGAACAGGTGCAGGGCATGAAGCTGGTCGGCAACAGCTCGGTGTCGAACATGATCGCCAACAGCGAT
AGCTTCCGCACCTATGTGGACGCCTATCTGCGCGGCGTCACCATCGTCTCCACCGTGATGAAGCCGGACGGCACCAGCGA
GGCGGTGGCCGAAATCACGCTGGATCAGGAGTTCTACAAGCAATTCCGCAATTCGATGGAAAAGACCGGCAGCGTGATGC
AGGCCGCCAAGGAAACCGGCACCGCGGGCGCGCTGTGTCCGGAGGGCAATTGCGGCGCCACCAAGGTGGTCCCCGCGCCG
GCGGCTATGCCCATGACCGCCTCACCTGCCCGCTACAGCAGCAATTTCTACGTGAACCAGTGA

Upstream 100 bases:

>100_bases
TGTCCGCCGGTTTTTCATCGGCCAGGCAGATGAACCGGGCCGCCGCCGCGCATGACTGAGCGGCGGCGCATGCCGTCCGC
GTCTCAAGTTTCATCAGTTA

Downstream 100 bases:

>100_bases
TGAAGCGAACCGCTATCCGTGCCGCCGCTCTTGCGGCGGCATTTGTTTTGTCGGCCGCGGCGCGGGCGGAACGCCTGAGC
GCCGAGGGCGTGGCGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPMFQVDELREWFIPFHQHLSVIAMNTVRRMPRLALLALMAGLTACATPAPQKSSMGAPMPMKESGSVPSGVGYVGSGDE
AASGEEVKVVVKEVNPFRPIVVRVTGSGAAPYTNSLTPSQRKLLAMRAARLDAFRSIAEQVQGMKLVGNSSVSNMIANSD
SFRTYVDAYLRGVTIVSTVMKPDGTSEAVAEITLDQEFYKQFRNSMEKTGSVMQAAKETGTAGALCPEGNCGATKVVPAP
AAMPMTASPARYSSNFYVNQ

Sequences:

>Translated_260_residues
MPMFQVDELREWFIPFHQHLSVIAMNTVRRMPRLALLALMAGLTACATPAPQKSSMGAPMPMKESGSVPSGVGYVGSGDE
AASGEEVKVVVKEVNPFRPIVVRVTGSGAAPYTNSLTPSQRKLLAMRAARLDAFRSIAEQVQGMKLVGNSSVSNMIANSD
SFRTYVDAYLRGVTIVSTVMKPDGTSEAVAEITLDQEFYKQFRNSMEKTGSVMQAAKETGTAGALCPEGNCGATKVVPAP
AAMPMTASPARYSSNFYVNQ
>Mature_259_residues
PMFQVDELREWFIPFHQHLSVIAMNTVRRMPRLALLALMAGLTACATPAPQKSSMGAPMPMKESGSVPSGVGYVGSGDEA
ASGEEVKVVVKEVNPFRPIVVRVTGSGAAPYTNSLTPSQRKLLAMRAARLDAFRSIAEQVQGMKLVGNSSVSNMIANSDS
FRTYVDAYLRGVTIVSTVMKPDGTSEAVAEITLDQEFYKQFRNSMEKTGSVMQAAKETGTAGALCPEGNCGATKVVPAPA
AMPMTASPARYSSNFYVNQ

Specific function: Unknown

COG id: COG3018

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27796; Mature: 27665

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMFQVDELREWFIPFHQHLSVIAMNTVRRMPRLALLALMAGLTACATPAPQKSSMGAPM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PMKESGSVPSGVGYVGSGDEAASGEEVKVVVKEVNPFRPIVVRVTGSGAAPYTNSLTPSQ
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHH
RKLLAMRAARLDAFRSIAEQVQGMKLVGNSSVSNMIANSDSFRTYVDAYLRGVTIVSTVM
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KPDGTSEAVAEITLDQEFYKQFRNSMEKTGSVMQAAKETGTAGALCPEGNCGATKVVPAP
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC
AAMPMTASPARYSSNFYVNQ
CCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
PMFQVDELREWFIPFHQHLSVIAMNTVRRMPRLALLALMAGLTACATPAPQKSSMGAPM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PMKESGSVPSGVGYVGSGDEAASGEEVKVVVKEVNPFRPIVVRVTGSGAAPYTNSLTPSQ
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHH
RKLLAMRAARLDAFRSIAEQVQGMKLVGNSSVSNMIANSDSFRTYVDAYLRGVTIVSTVM
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KPDGTSEAVAEITLDQEFYKQFRNSMEKTGSVMQAAKETGTAGALCPEGNCGATKVVPAP
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC
AAMPMTASPARYSSNFYVNQ
CCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA