| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497362
Identifier: 34497362
GI number: 34497362
Start: 2071605
End: 2072897
Strand: Direct
Name: 34497362
Synonym: CV_1907
Alternate gene names: NA
Gene position: 2071605-2072897 (Clockwise)
Preceding gene: 34497361
Following gene: 34497363
Centisome position: 43.6
GC content: 67.29
Gene sequence:
>1293_bases ATGAAGCGAACCGCTATCCGTGCCGCCGCTCTTGCGGCGGCATTTGTTTTGTCGGCCGCGGCGCGGGCGGAACGCCTGAG CGCCGAGGGCGTGGCGCCGCTGGACAACGGACCGGTGGCCGCGCGCCACATGGCGATACAGGATGCGTTGAAGCTGATCT CCATCCGCCAGGGCGCGCGGATCGAGTCGACCCAGGTGATGGAGATGGGCAGGCAGGGAGAGTCGGGCACGCTGACCGCC GCCGCGCCGGTTCAGGGATCGGTGCGGGTGGTGAGCGAGTACGCCGAAGGCAAGCTCTATCATGTCAAGGTCGAGGTGGA TACCGCCAAGGCGGCGTCCGTGTCGAACTCCGCATCCGAGAGGCGGAGCGATCCGTCCTGCCCGATGCCGGTGGGGCGGT CGATGAAGCGCAAGCTGGTGACCACGTATTTCGATGTCGCGCGCCCGGCCGAGGCGTCCGACATGCCGGACCTGGCGACG GCGCTGCCGACCGAGCTGGCGCGGCGGCTGTCGCGCAACGCCATGCTGATGGTGAGGGACGCCAACACCGTGTCGGTGCT AGCGGACAGCCGTATCGCCGAGCCGGACGCCGGCTGGCAAACCGCGAGCCAGCTGGGGCAGCGCGAGAACGTGCAGTTCG TGGTGGCGGGGCGGGTATTGTCCACCTCGGTGACCGAAAAAGGCGTAAGGCTGTCCCTGTTCGAGTCCAACAACACCAGC CAGCAGGGCGCCTTCTACAACGGTCCCTTCGCCGGCATGTTCGGCAACGGCGTCAAATACGTGCCCACGCAGCGGCAGTT CGACCTCGAGTTCTGGATATACGACGGCCTGACCGGCTCGCTGCTGGCCAGGGAGCGCGTCAACGGCATGGCCAGCTCCA AGGGGCCAATCATCCCGCCCCAGCCCCAGCCTTTCGCTTCCGGGGCCTTCTGGCAGGGTGACTACGGCAAGCTGGTCAGC CAGCTGCTGGATCGCGCGTCCGACCGCATAGACAACATCATCTCCTGCATTCCGTTCTCGGCCCGGGTGGTGAGGCTGGA AGGCAAGCGCGTCTACATCAACGCCGGCCTGCTGGACGGCATGGCGGTCGGGGACAAGCTGCTGTTGTACAAGCGCGCCA GCGGCCAGCCGCTGCGCGACCTGATTTCCGGCCGCGAGCTGGGCATGCCGGAAAGCCTGAACGGCGACGTGAGCCTGATC CAGGTGCAGCCCAATTTCTCCATCGGCCTGGTGCAGGGCAGCGGCCGGGCGCCGTCGGAGGGCGATTACGTCCGCTTTGG AACGGCGCGCTGA
Upstream 100 bases:
>100_bases AGGGCAATTGCGGCGCCACCAAGGTGGTCCCCGCGCCGGCGGCTATGCCCATGACCGCCTCACCTGCCCGCTACAGCAGC AATTTCTACGTGAACCAGTG
Downstream 100 bases:
>100_bases TGTTGGTTTTTTCTGCTCAAAGTTCCGCTGTTTGCAATTTATTTTTGTATTGATAAGTATTATCAGCTGGTGTTACGGTG CGTCCCTGCACATCGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKRTAIRAAALAAAFVLSAAARAERLSAEGVAPLDNGPVAARHMAIQDALKLISIRQGARIESTQVMEMGRQGESGTLTA AAPVQGSVRVVSEYAEGKLYHVKVEVDTAKAASVSNSASERRSDPSCPMPVGRSMKRKLVTTYFDVARPAEASDMPDLAT ALPTELARRLSRNAMLMVRDANTVSVLADSRIAEPDAGWQTASQLGQRENVQFVVAGRVLSTSVTEKGVRLSLFESNNTS QQGAFYNGPFAGMFGNGVKYVPTQRQFDLEFWIYDGLTGSLLARERVNGMASSKGPIIPPQPQPFASGAFWQGDYGKLVS QLLDRASDRIDNIISCIPFSARVVRLEGKRVYINAGLLDGMAVGDKLLLYKRASGQPLRDLISGRELGMPESLNGDVSLI QVQPNFSIGLVQGSGRAPSEGDYVRFGTAR
Sequences:
>Translated_430_residues MKRTAIRAAALAAAFVLSAAARAERLSAEGVAPLDNGPVAARHMAIQDALKLISIRQGARIESTQVMEMGRQGESGTLTA AAPVQGSVRVVSEYAEGKLYHVKVEVDTAKAASVSNSASERRSDPSCPMPVGRSMKRKLVTTYFDVARPAEASDMPDLAT ALPTELARRLSRNAMLMVRDANTVSVLADSRIAEPDAGWQTASQLGQRENVQFVVAGRVLSTSVTEKGVRLSLFESNNTS QQGAFYNGPFAGMFGNGVKYVPTQRQFDLEFWIYDGLTGSLLARERVNGMASSKGPIIPPQPQPFASGAFWQGDYGKLVS QLLDRASDRIDNIISCIPFSARVVRLEGKRVYINAGLLDGMAVGDKLLLYKRASGQPLRDLISGRELGMPESLNGDVSLI QVQPNFSIGLVQGSGRAPSEGDYVRFGTAR >Mature_430_residues MKRTAIRAAALAAAFVLSAAARAERLSAEGVAPLDNGPVAARHMAIQDALKLISIRQGARIESTQVMEMGRQGESGTLTA AAPVQGSVRVVSEYAEGKLYHVKVEVDTAKAASVSNSASERRSDPSCPMPVGRSMKRKLVTTYFDVARPAEASDMPDLAT ALPTELARRLSRNAMLMVRDANTVSVLADSRIAEPDAGWQTASQLGQRENVQFVVAGRVLSTSVTEKGVRLSLFESNNTS QQGAFYNGPFAGMFGNGVKYVPTQRQFDLEFWIYDGLTGSLLARERVNGMASSKGPIIPPQPQPFASGAFWQGDYGKLVS QLLDRASDRIDNIISCIPFSARVVRLEGKRVYINAGLLDGMAVGDKLLLYKRASGQPLRDLISGRELGMPESLNGDVSLI QVQPNFSIGLVQGSGRAPSEGDYVRFGTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46197; Mature: 46197
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTAIRAAALAAAFVLSAAARAERLSAEGVAPLDNGPVAARHMAIQDALKLISIRQGAR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC IESTQVMEMGRQGESGTLTAAAPVQGSVRVVSEYAEGKLYHVKVEVDTAKAASVSNSASE CCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEEEEEECCHHHHCCCCHHH RRSDPSCPMPVGRSMKRKLVTTYFDVARPAEASDMPDLATALPTELARRLSRNAMLMVRD HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC ANTVSVLADSRIAEPDAGWQTASQLGQRENVQFVVAGRVLSTSVTEKGVRLSLFESNNTS CCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCC QQGAFYNGPFAGMFGNGVKYVPTQRQFDLEFWIYDGLTGSLLARERVNGMASSKGPIIPP CCCCEECCCCCCCCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC QPQPFASGAFWQGDYGKLVSQLLDRASDRIDNIISCIPFSARVVRLEGKRVYINAGLLDG CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCC MAVGDKLLLYKRASGQPLRDLISGRELGMPESLNGDVSLIQVQPNFSIGLVQGSGRAPSE HHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC GDYVRFGTAR CCEEEECCCC >Mature Secondary Structure MKRTAIRAAALAAAFVLSAAARAERLSAEGVAPLDNGPVAARHMAIQDALKLISIRQGAR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC IESTQVMEMGRQGESGTLTAAAPVQGSVRVVSEYAEGKLYHVKVEVDTAKAASVSNSASE CCHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEEEEEECCHHHHCCCCHHH RRSDPSCPMPVGRSMKRKLVTTYFDVARPAEASDMPDLATALPTELARRLSRNAMLMVRD HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC ANTVSVLADSRIAEPDAGWQTASQLGQRENVQFVVAGRVLSTSVTEKGVRLSLFESNNTS CCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHCCCCEEEEEECCCCC QQGAFYNGPFAGMFGNGVKYVPTQRQFDLEFWIYDGLTGSLLARERVNGMASSKGPIIPP CCCCEECCCCCCCCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC QPQPFASGAFWQGDYGKLVSQLLDRASDRIDNIISCIPFSARVVRLEGKRVYINAGLLDG CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCC MAVGDKLLLYKRASGQPLRDLISGRELGMPESLNGDVSLIQVQPNFSIGLVQGSGRAPSE HHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCC GDYVRFGTAR CCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA