| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cysU [H]
Identifier: 34497285
GI number: 34497285
Start: 1988584
End: 1989456
Strand: Reverse
Name: cysU [H]
Synonym: CV_1830
Alternate gene names: 34497285
Gene position: 1989456-1988584 (Counterclockwise)
Preceding gene: 34497287
Following gene: 34497284
Centisome position: 41.87
GC content: 70.56
Gene sequence:
>873_bases TTGGAATCCACGATGTCAGCGACACTCGCTCCGCCACCCCGCCCGCCCCGCGTCCTGCCCGGCTTCAGCCTGTCGCTGGG CTTCACCGTCAGCTATCTGTCGCTGCTGGTGCTGATTCCGCTGGCCGCGGTGGCCTTGCGCGCCGCCGGCCAGCCGCTGG AAAGCTTCTGGCAGGCCGCCGCTTCGCCGCGGGTGCTGGCGTCCTACCGGCTCAGCTTCGGCATGGCGCTGGCGGCGGCC GCCATCAACAGCGTGTTCGGCCTGCTGCTGGCCTGGTCGCTGACCCGCTACCGCTTTCCCGGCAAGCGGCTGGTGGACGC GCTGGTGGACCTGCCGTTCGCGCTGCCGACAGCGGTGGCCGGTATCGCGCTGACCGCGCTGTACGCCGGCAACGGCTGGC TGGGCCGATACCTGGAGCCGCTGGGCGTCAAGGTGGCTTTTGGCCCGCTGGGCGTGCTGGTGGCGCTGATCTTCATCGGC CTGCCCTTCGTGGTGCGCACGGTGCAGCCGGTGCTGGAAGATCTGGAGTCCGAGCTGGAGGAGGCCGCGGCCTGCCTGGG CGCGCGCCGCTGGCAGATTTTCCGCCACGTGATCCTGCCCACGCTGCAGCCGGCGCTGCTGACCGGCTTCGCGCTGGCCT TCGCCCGCGCGGTCGGCGAGTACGGCTCGGTGATCTTCATCGCCGGCAACGTGCCCATGGTGTCGGAGATCACCCCGCTG ATGATCATCAGCAAGCTGGAGCAGTTCGACTACGCCGGCGCCGCCGCCATCGCCAGCGTGATGCTGGCCGCGTCCTTCCT GCTGTTGCTGGCGATCAACGGCCTGCAGTTCTGGAGCGCGCGCCGACACGGCCGCGCGGGAGGCGCCCGATGA
Upstream 100 bases:
>100_bases TTCGTCCGTCGCCCACTTTGCATAATATCGAATAAGCATTGAAGAAATACTTATTTTCAGAATAAGACCCTCACGGATAT CGTTTATTCGGTTATATGAA
Downstream 100 bases:
>100_bases GCGCCGCCATCACCCATCCGCGCCCGGCGACAGACAAGGCCGCGCAACTGGAATCCCGCGCCGCCACCCGCGAGTCGCGC GCCGTCAAGTGGACCATCCT
Product: sulfate transport system permease CysU
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MESTMSATLAPPPRPPRVLPGFSLSLGFTVSYLSLLVLIPLAAVALRAAGQPLESFWQAAASPRVLASYRLSFGMALAAA AINSVFGLLLAWSLTRYRFPGKRLVDALVDLPFALPTAVAGIALTALYAGNGWLGRYLEPLGVKVAFGPLGVLVALIFIG LPFVVRTVQPVLEDLESELEEAAACLGARRWQIFRHVILPTLQPALLTGFALAFARAVGEYGSVIFIAGNVPMVSEITPL MIISKLEQFDYAGAAAIASVMLAASFLLLLAINGLQFWSARRHGRAGGAR
Sequences:
>Translated_290_residues MESTMSATLAPPPRPPRVLPGFSLSLGFTVSYLSLLVLIPLAAVALRAAGQPLESFWQAAASPRVLASYRLSFGMALAAA AINSVFGLLLAWSLTRYRFPGKRLVDALVDLPFALPTAVAGIALTALYAGNGWLGRYLEPLGVKVAFGPLGVLVALIFIG LPFVVRTVQPVLEDLESELEEAAACLGARRWQIFRHVILPTLQPALLTGFALAFARAVGEYGSVIFIAGNVPMVSEITPL MIISKLEQFDYAGAAAIASVMLAASFLLLLAINGLQFWSARRHGRAGGAR >Mature_290_residues MESTMSATLAPPPRPPRVLPGFSLSLGFTVSYLSLLVLIPLAAVALRAAGQPLESFWQAAASPRVLASYRLSFGMALAAA AINSVFGLLLAWSLTRYRFPGKRLVDALVDLPFALPTAVAGIALTALYAGNGWLGRYLEPLGVKVAFGPLGVLVALIFIG LPFVVRTVQPVLEDLESELEEAAACLGARRWQIFRHVILPTLQPALLTGFALAFARAVGEYGSVIFIAGNVPMVSEITPL MIISKLEQFDYAGAAAIASVMLAASFLLLLAINGLQFWSARRHGRAGGAR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=269, Percent_Identity=53.5315985130111, Blast_Score=255, Evalue=2e-69, Organism=Escherichia coli, GI87082099, Length=273, Percent_Identity=34.4322344322344, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1786980, Length=202, Percent_Identity=34.1584158415842, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1786254, Length=204, Percent_Identity=29.9019607843137, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1787368, Length=210, Percent_Identity=30.952380952381, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787369, Length=155, Percent_Identity=30.9677419354839, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1790464, Length=196, Percent_Identity=32.1428571428571, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30802; Mature: 30802
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTMSATLAPPPRPPRVLPGFSLSLGFTVSYLSLLVLIPLAAVALRAAGQPLESFWQAA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ASPRVLASYRLSFGMALAAAAINSVFGLLLAWSLTRYRFPGKRLVDALVDLPFALPTAVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH GIALTALYAGNGWLGRYLEPLGVKVAFGPLGVLVALIFIGLPFVVRTVQPVLEDLESELE HHHHHHHHCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAACLGARRWQIFRHVILPTLQPALLTGFALAFARAVGEYGSVIFIAGNVPMVSEITPL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH MIISKLEQFDYAGAAAIASVMLAASFLLLLAINGLQFWSARRHGRAGGAR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MESTMSATLAPPPRPPRVLPGFSLSLGFTVSYLSLLVLIPLAAVALRAAGQPLESFWQAA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ASPRVLASYRLSFGMALAAAAINSVFGLLLAWSLTRYRFPGKRLVDALVDLPFALPTAVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH GIALTALYAGNGWLGRYLEPLGVKVAFGPLGVLVALIFIGLPFVVRTVQPVLEDLESELE HHHHHHHHCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAACLGARRWQIFRHVILPTLQPALLTGFALAFARAVGEYGSVIFIAGNVPMVSEITPL HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH MIISKLEQFDYAGAAAIASVMLAASFLLLLAINGLQFWSARRHGRAGGAR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]