| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cysW [H]
Identifier: 34497284
GI number: 34497284
Start: 1987709
End: 1988587
Strand: Reverse
Name: cysW [H]
Synonym: CV_1829
Alternate gene names: 34497284
Gene position: 1988587-1987709 (Counterclockwise)
Preceding gene: 34497285
Following gene: 34497283
Centisome position: 41.86
GC content: 68.15
Gene sequence:
>879_bases ATGAGCGCCGCCATCACCCATCCGCGCCCGGCGACAGACAAGGCCGCGCAACTGGAATCCCGCGCCGCCACCCGCGAGTC GCGCGCCGTCAAGTGGACCATCCTGGCGCTGTCGCTGGGCTTTTTCGCCGTGTTCCTGCTGCTGCCGCTGTTCGTCGTGT TCGCCGAGGCGCTGGCCAAGGGCTGGAGCACCTATCTGACCGCGCTGTCCGAGCCCGACGCGCTGGCGGCGGTGAGGCTG ACGCTGCTGGCGGCGGCGGTGTCGGTGCCGCTGAACCTGGCCTTCGGCATCGCCGCCGCCTGGGCGGTCACCCGTTTCGA CTTCCGCGGCAAGCAGCTGCTGATCACGCTGATCGACCTGCCGTTCTCGGTGTCGCCGGTGGTCGCCGGCCTGATCTTCG TGCTGGTGTTCGGCCAGCAAGGCTGGCTGGGGCCGCGGCTGGCTGAGTACGGCATCAAGATCATTTTCTCGGTGCCCGGC ATCGTGCTGGCCACCTTGTTCATCACCGTGCCCTTCGTCGCCCGCGAGCTGATCCCGCTGATGGAGGCCCAGGGCCGCGA GGAGGAGGAAGCCGCGGTGGTGCTGGGCGCGCGCGGCTGGCAGGTGCTGTGGCACGTGACCCTGCCGAATGTGCGCTGGG CGCTGCTGTACGGCGTGATCCTCAGCAACGCGCGGGCGATGGGCGAGTTCGGCGCGGTGTCGGTGGTGTCCGGCCACATC CGCGGCGAAACCAATACCCTGCCTTTGCACGTGGAAATCCTCTACAACGAGTACAATTTCGCCGCGGCCTTCGCCGTGGC GTCCCTGCTGGCCTTGCTGGCCCTGGTCACGCTGGCGCTGAAGAGCTGGGTGGAATGGCGCAGCGTCAAGGAAAACTGA
Upstream 100 bases:
>100_bases TCGCCAGCGTGATGCTGGCCGCGTCCTTCCTGCTGTTGCTGGCGATCAACGGCCTGCAGTTCTGGAGCGCGCGCCGACAC GGCCGCGCGGGAGGCGCCCG
Downstream 100 bases:
>100_bases GATGAGCATACAAGTAGAAAACATCCGCAAGGCCTTCGGCGACTTCGTCGCGCTGAACGACATCAGCCTCAACTTCCCCG GCGGCGAGCTGGTGGCGCTG
Product: sulfate transport system permease CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSAAITHPRPATDKAAQLESRAATRESRAVKWTILALSLGFFAVFLLLPLFVVFAEALAKGWSTYLTALSEPDALAAVRL TLLAAAVSVPLNLAFGIAAAWAVTRFDFRGKQLLITLIDLPFSVSPVVAGLIFVLVFGQQGWLGPRLAEYGIKIIFSVPG IVLATLFITVPFVARELIPLMEAQGREEEEAAVVLGARGWQVLWHVTLPNVRWALLYGVILSNARAMGEFGAVSVVSGHI RGETNTLPLHVEILYNEYNFAAAFAVASLLALLALVTLALKSWVEWRSVKEN
Sequences:
>Translated_292_residues MSAAITHPRPATDKAAQLESRAATRESRAVKWTILALSLGFFAVFLLLPLFVVFAEALAKGWSTYLTALSEPDALAAVRL TLLAAAVSVPLNLAFGIAAAWAVTRFDFRGKQLLITLIDLPFSVSPVVAGLIFVLVFGQQGWLGPRLAEYGIKIIFSVPG IVLATLFITVPFVARELIPLMEAQGREEEEAAVVLGARGWQVLWHVTLPNVRWALLYGVILSNARAMGEFGAVSVVSGHI RGETNTLPLHVEILYNEYNFAAAFAVASLLALLALVTLALKSWVEWRSVKEN >Mature_291_residues SAAITHPRPATDKAAQLESRAATRESRAVKWTILALSLGFFAVFLLLPLFVVFAEALAKGWSTYLTALSEPDALAAVRLT LLAAAVSVPLNLAFGIAAAWAVTRFDFRGKQLLITLIDLPFSVSPVVAGLIFVLVFGQQGWLGPRLAEYGIKIIFSVPGI VLATLFITVPFVARELIPLMEAQGREEEEAAVVLGARGWQVLWHVTLPNVRWALLYGVILSNARAMGEFGAVSVVSGHIR GETNTLPLHVEILYNEYNFAAAFAVASLLALLALVTLALKSWVEWRSVKEN
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=268, Percent_Identity=53.3582089552239, Blast_Score=293, Evalue=6e-81, Organism=Escherichia coli, GI1788764, Length=209, Percent_Identity=40.1913875598086, Blast_Score=152, Evalue=3e-38, Organism=Escherichia coli, GI1786980, Length=218, Percent_Identity=33.4862385321101, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31678; Mature: 31546
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAITHPRPATDKAAQLESRAATRESRAVKWTILALSLGFFAVFLLLPLFVVFAEALAK CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSTYLTALSEPDALAAVRLTLLAAAVSVPLNLAFGIAAAWAVTRFDFRGKQLLITLIDL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC PFSVSPVVAGLIFVLVFGQQGWLGPRLAEYGIKIIFSVPGIVLATLFITVPFVARELIPL CCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH MEAQGREEEEAAVVLGARGWQVLWHVTLPNVRWALLYGVILSNARAMGEFGAVSVVSGHI HHHCCCCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCHHEEEEEE RGETNTLPLHVEILYNEYNFAAAFAVASLLALLALVTLALKSWVEWRSVKEN CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAAITHPRPATDKAAQLESRAATRESRAVKWTILALSLGFFAVFLLLPLFVVFAEALAK CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSTYLTALSEPDALAAVRLTLLAAAVSVPLNLAFGIAAAWAVTRFDFRGKQLLITLIDL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC PFSVSPVVAGLIFVLVFGQQGWLGPRLAEYGIKIIFSVPGIVLATLFITVPFVARELIPL CCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH MEAQGREEEEAAVVLGARGWQVLWHVTLPNVRWALLYGVILSNARAMGEFGAVSVVSGHI HHHCCCCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCHHHCCCCCHHEEEEEE RGETNTLPLHVEILYNEYNFAAAFAVASLLALLALVTLALKSWVEWRSVKEN CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]