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The map label for this gene is ygcS [C]

Identifier: 34497278

GI number: 34497278

Start: 1980932

End: 1982158

Strand: Direct

Name: ygcS [C]

Synonym: CV_1823

Alternate gene names: 34497278

Gene position: 1980932-1982158 (Clockwise)

Preceding gene: 34497277

Following gene: 34497279

Centisome position: 41.69

GC content: 69.76

Gene sequence:

>1227_bases
ATGCCGCTGGGAGCCTTCGTGCCGCCGTCCTCCACTCCGTTTTCCGTCTCTGCCCGCGCCGCGATGCCGCGCGGGGTCTG
GGTTTTGGGCCTTGTCAGCCTGCTGATGGACGTCTCGTCCGAGCTGGCGCATAGCCTGCTGCCGCTGTTTCTGGCCGGCA
CGCTGGGGGTGCCGATGCTGGCCATCGGCCTGATCGAAGGCGTGGCCGAGGCCACCGCGCTGATCTGCAAGGTATTTTCC
GGCGCGATCAGCGACTGGCTGGGCAGGCGCAAGCCGCTGCTGCTGTTCGGCTATGGCTTGGCCGCCGCTTCCAAGCCCCT
GTTTCCCCTCGCGCATTCCGCCTCCACCGTGCTGCTCGCGCGGTTCGTCGACCGTGTGGGCAAGGGCGTGCGCGGCGCGC
CGCGCGACGCGCTGATCGCCGACATCACGCCGCCGGCCATCCGCGGCGCGGCTTTCGGCCTGCGCCAGAGCATGGACACC
GTCGGCGCGGTGCTGGGCCCGCTGCTGGCCATTGGGCTGATGTTTCTTTACCGCGACGACATCCGCAGCGCGCTGTGGTG
GTCGTTGCCGCCTGCGCTATTGGCGGTGGCCGCCATCTGGCTGTGGGTGCGGGAGCCGGCCGGACATGGGGAGAAAAGGG
AGCGAGCGCCCTTGTTCAGCCCTAGGGTTTTTGCCCAATTTTCAACAAGCTTCTGGGGCGTGGCCGGGCTGGGCGCGGTG
TTCACGCTGGCGCGCTTCAGCGAGGCCTTTCTGGTGCTGCGCGGCGCGCAGCTGGGGCTGCCGCTGGCCTGGGCGCCATT
GACGATGGTGGCGATGTCGGCCAGCTACGCGCTCAGCGCCTACCCGCTGGGCTGGCTGTCCGACCATGTCAGCCGCGCGC
GCTTGCTGCAGTTGTCCTTGTTGCTGTTGATCGCCGCCGATCTGGCGCTGGCAGCCGGAACCGGTCCGGCGATGCTGCTG
GCCGGCGCGCTGTTGTGGGGCCTGCATCTGGGCTGCAGCCAGGGACTGCTGTCGGCGCTGGTGGCGCAGACTGCGCCGGC
GGGCCTGGCGGGATCGGCATTCGGACTGTTCAACTTGATTTGCGGCTTGGCGACGCTGTTGGCGAGCGTGGTGGCCGGCG
CGCTGTGGCAGGAGTGGGGCGCGGCGGCGACGTTCCATGGCGGCGCGGGGTTCGCGGCGGCGGCGCTGCTGCTCGGCCTG
GTTTTGCGTCCGCTGCGACAGTTCTGA

Upstream 100 bases:

>100_bases
CCTCCTTGCCGTACGGCTTGTGCTGCCTGCGTCGGCGCGCCTGGCTCAGGTGTTTTGTCGTCAGCTGCGCTAAATGTGCT
TGAAGCTCCCGGCGGCGGAC

Downstream 100 bases:

>100_bases
CGGCTAGTGTCTTGACTGTGCGCATATCGCCTGTTTTTTAGGCGCACAAGGCGGTGAGTTGATGGTAAAGTAAATGTAAA
GTTATTTGCTTATATCAATT

Product: transmembrane transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPLGAFVPPSSTPFSVSARAAMPRGVWVLGLVSLLMDVSSELAHSLLPLFLAGTLGVPMLAIGLIEGVAEATALICKVFS
GAISDWLGRRKPLLLFGYGLAAASKPLFPLAHSASTVLLARFVDRVGKGVRGAPRDALIADITPPAIRGAAFGLRQSMDT
VGAVLGPLLAIGLMFLYRDDIRSALWWSLPPALLAVAAIWLWVREPAGHGEKRERAPLFSPRVFAQFSTSFWGVAGLGAV
FTLARFSEAFLVLRGAQLGLPLAWAPLTMVAMSASYALSAYPLGWLSDHVSRARLLQLSLLLLIAADLALAAGTGPAMLL
AGALLWGLHLGCSQGLLSALVAQTAPAGLAGSAFGLFNLICGLATLLASVVAGALWQEWGAAATFHGGAGFAAAALLLGL
VLRPLRQF

Sequences:

>Translated_408_residues
MPLGAFVPPSSTPFSVSARAAMPRGVWVLGLVSLLMDVSSELAHSLLPLFLAGTLGVPMLAIGLIEGVAEATALICKVFS
GAISDWLGRRKPLLLFGYGLAAASKPLFPLAHSASTVLLARFVDRVGKGVRGAPRDALIADITPPAIRGAAFGLRQSMDT
VGAVLGPLLAIGLMFLYRDDIRSALWWSLPPALLAVAAIWLWVREPAGHGEKRERAPLFSPRVFAQFSTSFWGVAGLGAV
FTLARFSEAFLVLRGAQLGLPLAWAPLTMVAMSASYALSAYPLGWLSDHVSRARLLQLSLLLLIAADLALAAGTGPAMLL
AGALLWGLHLGCSQGLLSALVAQTAPAGLAGSAFGLFNLICGLATLLASVVAGALWQEWGAAATFHGGAGFAAAALLLGL
VLRPLRQF
>Mature_407_residues
PLGAFVPPSSTPFSVSARAAMPRGVWVLGLVSLLMDVSSELAHSLLPLFLAGTLGVPMLAIGLIEGVAEATALICKVFSG
AISDWLGRRKPLLLFGYGLAAASKPLFPLAHSASTVLLARFVDRVGKGVRGAPRDALIADITPPAIRGAAFGLRQSMDTV
GAVLGPLLAIGLMFLYRDDIRSALWWSLPPALLAVAAIWLWVREPAGHGEKRERAPLFSPRVFAQFSTSFWGVAGLGAVF
TLARFSEAFLVLRGAQLGLPLAWAPLTMVAMSASYALSAYPLGWLSDHVSRARLLQLSLLLLIAADLALAAGTGPAMLLA
GALLWGLHLGCSQGLLSALVAQTAPAGLAGSAFGLFNLICGLATLLASVVAGALWQEWGAAATFHGGAGFAAAALLLGLV
LRPLRQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42425; Mature: 42294

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGAFVPPSSTPFSVSARAAMPRGVWVLGLVSLLMDVSSELAHSLLPLFLAGTLGVPML
CCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGLIEGVAEATALICKVFSGAISDWLGRRKPLLLFGYGLAAASKPLFPLAHSASTVLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHH
RFVDRVGKGVRGAPRDALIADITPPAIRGAAFGLRQSMDTVGAVLGPLLAIGLMFLYRDD
HHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSALWWSLPPALLAVAAIWLWVREPAGHGEKRERAPLFSPRVFAQFSTSFWGVAGLGAV
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FTLARFSEAFLVLRGAQLGLPLAWAPLTMVAMSASYALSAYPLGWLSDHVSRARLLQLSL
HHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLLIAADLALAAGTGPAMLLAGALLWGLHLGCSQGLLSALVAQTAPAGLAGSAFGLFNLI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
CGLATLLASVVAGALWQEWGAAATFHGGAGFAAAALLLGLVLRPLRQF
HHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLGAFVPPSSTPFSVSARAAMPRGVWVLGLVSLLMDVSSELAHSLLPLFLAGTLGVPML
CCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGLIEGVAEATALICKVFSGAISDWLGRRKPLLLFGYGLAAASKPLFPLAHSASTVLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHHH
RFVDRVGKGVRGAPRDALIADITPPAIRGAAFGLRQSMDTVGAVLGPLLAIGLMFLYRDD
HHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSALWWSLPPALLAVAAIWLWVREPAGHGEKRERAPLFSPRVFAQFSTSFWGVAGLGAV
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FTLARFSEAFLVLRGAQLGLPLAWAPLTMVAMSASYALSAYPLGWLSDHVSRARLLQLSL
HHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLLIAADLALAAGTGPAMLLAGALLWGLHLGCSQGLLSALVAQTAPAGLAGSAFGLFNLI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
CGLATLLASVVAGALWQEWGAAATFHGGAGFAAAALLLGLVLRPLRQF
HHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]