| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ybjG [H]
Identifier: 34497277
GI number: 34497277
Start: 1980195
End: 1980797
Strand: Direct
Name: ybjG [H]
Synonym: CV_1822
Alternate gene names: 34497277
Gene position: 1980195-1980797 (Clockwise)
Preceding gene: 34497275
Following gene: 34497278
Centisome position: 41.68
GC content: 64.51
Gene sequence:
>603_bases ATGTCTCAAGTCGAAATCCTGAATCAATCGTTGTTCCTGCTGATCAACGCCACGCCGGAAACCTCTCCGTTTACCATCAA GCTGGCCGTTTTCATCGCCCAGGACATCATGCGGCTGTTGCCGCTGTGGCTGGCCGCGCTGTGGCTGTGGGGCCGTCCGG CCCTGCGCGACACCATTTTGAAATCGGTGGCGCTGACCGCCGTCGCCTTGATGGGCAACGGGTTGATCGGCCTGGCCTGG CCGCATCCGCGTCCCTTCGCTGTGCCGCTGGGCCACACCTTCCTGCTGCACGACGCCACGCCGTCCTTTCCCAGCAATCA CGGCACCATCTTCGCCATGATGGCTTTGTGCTGGTGCTTCAGTCCGGCGCGAGGCTGGGGCTGGCTGCTGGCGATTGCCG GCGCGGCCGTCGCCTGGTCCCGGGTGTTTCTCGGCGTGCATTTCCCGCTGGACATGCTGGGCGCCTTGCTGGTATCCGTC TTCTGGTACGCTAGCCTGTCGCCGCTGTGGTCCCGCAAGGGAGGGGCCCTGACGGCGGCGCTGGAGTCGCTGTACCGCCA GTTATTGGCCAAACCGATCGCCTCCGGGTTGATCAGGCGCTGA
Upstream 100 bases:
>100_bases ATTTTTAAGGCCGAGGGAACCAAACCGCCGCCATTCGCCCTAATATGTCGTTTTTATTACTGGTCTTCGCGCCCGTGCGG CCGCGTTTCACTGCTAGCCG
Downstream 100 bases:
>100_bases GCGTCGCTGGCAAAACTCCGAGTCCTGTGTTGCGCCTCCTTGCCGTACGGCTTGTGCTGCCTGCGTCGGCGCGCCTGGCT CAGGTGTTTTGTCGTCAGCT
Product: permease
Products: NA
Alternate protein names: Undecaprenyl pyrophosphate phosphatase [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSQVEILNQSLFLLINATPETSPFTIKLAVFIAQDIMRLLPLWLAALWLWGRPALRDTILKSVALTAVALMGNGLIGLAW PHPRPFAVPLGHTFLLHDATPSFPSNHGTIFAMMALCWCFSPARGWGWLLAIAGAAVAWSRVFLGVHFPLDMLGALLVSV FWYASLSPLWSRKGGALTAALESLYRQLLAKPIASGLIRR
Sequences:
>Translated_200_residues MSQVEILNQSLFLLINATPETSPFTIKLAVFIAQDIMRLLPLWLAALWLWGRPALRDTILKSVALTAVALMGNGLIGLAW PHPRPFAVPLGHTFLLHDATPSFPSNHGTIFAMMALCWCFSPARGWGWLLAIAGAAVAWSRVFLGVHFPLDMLGALLVSV FWYASLSPLWSRKGGALTAALESLYRQLLAKPIASGLIRR >Mature_199_residues SQVEILNQSLFLLINATPETSPFTIKLAVFIAQDIMRLLPLWLAALWLWGRPALRDTILKSVALTAVALMGNGLIGLAWP HPRPFAVPLGHTFLLHDATPSFPSNHGTIFAMMALCWCFSPARGWGWLLAIAGAAVAWSRVFLGVHFPLDMLGALLVSVF WYASLSPLWSRKGGALTAALESLYRQLLAKPIASGLIRR
Specific function: Overexpression leads to increased undecaprenyl diphosphatase activity and to increased resistance to bacitracin. May have a preferred substrate other than undecaprenyl diphosphate in vivo [H]
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI1787064, Length=200, Percent_Identity=45.5, Blast_Score=155, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: =3.6.1.27 [H]
Molecular weight: Translated: 21912; Mature: 21781
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVEILNQSLFLLINATPETSPFTIKLAVFIAQDIMRLLPLWLAALWLWGRPALRDTIL CCHHHHHCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KSVALTAVALMGNGLIGLAWPHPRPFAVPLGHTFLLHDATPSFPSNHGTIFAMMALCWCF HHHHHHHHHHHCCCEEEECCCCCCCEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC SPARGWGWLLAIAGAAVAWSRVFLGVHFPLDMLGALLVSVFWYASLSPLWSRKGGALTAA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH LESLYRQLLAKPIASGLIRR HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQVEILNQSLFLLINATPETSPFTIKLAVFIAQDIMRLLPLWLAALWLWGRPALRDTIL CHHHHHCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KSVALTAVALMGNGLIGLAWPHPRPFAVPLGHTFLLHDATPSFPSNHGTIFAMMALCWCF HHHHHHHHHHHCCCEEEECCCCCCCEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC SPARGWGWLLAIAGAAVAWSRVFLGVHFPLDMLGALLVSVFWYASLSPLWSRKGGALTAA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHH LESLYRQLLAKPIASGLIRR HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]