| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ate1
Identifier: 34497254
GI number: 34497254
Start: 1953459
End: 1954187
Strand: Direct
Name: ate1
Synonym: CV_1799
Alternate gene names: 34497254
Gene position: 1953459-1954187 (Clockwise)
Preceding gene: 34497253
Following gene: 34497259
Centisome position: 41.12
GC content: 64.61
Gene sequence:
>729_bases ATGAGTCATCGTGAAGCCGGCCAGGTCGCGGCCATCCATTTCTACGCCACGGCGCCGTACCCGTGCAGCTATCTGTCCGG GCGGCAGGCGCGCTCCCAAGTCGCGATCCCGGCCGAGGCGATAGACGGCGGCGTCTACAGCCAGCTGGTCAGGCTGGGTT TTCGCCGCAGCGGCCTCTACACCTACCGGCCCTATTGCGACTCATGCCAGGCCTGCATCCCGGTCAGGCTGCCCGTCGAC CAGTTCCGGCCCAACCGTACCCAGCGGAAAGTGTGGCGGCGAGGCGCCGGGATGAGCGCGCGCTGGCTGCCGCTCGCATT CGACGCGGAACATTACGCGCTGTACCGCTGGTATCAGCAGACCCGCCATGCCGGCGGCGGCATGTCGGACGACGACGCGC AGCAGTATTCCGAGTTCATCCTGAAGAGCGGCGTGGACAGCCATCTGGCGGAATTCAGGCTGGATGGCGAGCTGAAGATG GTCAGCCTGGTGGATAGGCTGGTGGATGGCTTGTCGGCGGTTTACACCTTTTACGATCCGGAAGACAGCCAGTCCAGCCT GGGCGTCTACAACGTGCTGTGGCAGGTGGAGCAGGCACGCATGCTGGGGCTGAGCTACGTCTATCTGGGCTACTGGATAG CAGACTGCCGCAAGATGGCGTACAAGTCCGGTTATCGGCCGCTGCAGATGCTGCATGGCGGCCGCTGGCAGACGATGCCG GAAGGCTAG
Upstream 100 bases:
>100_bases CTCGGCGCGAGGCTGATATCGCGCGATGTTTTTCTTGCTACTCTGAAAGAGAATGTCCGGCATCCCCAGCCGGATCGGAT GTGGGATTACCATTACCGCC
Downstream 100 bases:
>100_bases ATGCCTCCTTGGCCGCCGGTTTGACGGCTAGGCTGCGGGCTGCCCATTCCCAGATGGAAAAACGTCGAGAGCACGCCTAG CGCGAATCCCGCGGCGGCTA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSHREAGQVAAIHFYATAPYPCSYLSGRQARSQVAIPAEAIDGGVYSQLVRLGFRRSGLYTYRPYCDSCQACIPVRLPVD QFRPNRTQRKVWRRGAGMSARWLPLAFDAEHYALYRWYQQTRHAGGGMSDDDAQQYSEFILKSGVDSHLAEFRLDGELKM VSLVDRLVDGLSAVYTFYDPEDSQSSLGVYNVLWQVEQARMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMP EG
Sequences:
>Translated_242_residues MSHREAGQVAAIHFYATAPYPCSYLSGRQARSQVAIPAEAIDGGVYSQLVRLGFRRSGLYTYRPYCDSCQACIPVRLPVD QFRPNRTQRKVWRRGAGMSARWLPLAFDAEHYALYRWYQQTRHAGGGMSDDDAQQYSEFILKSGVDSHLAEFRLDGELKM VSLVDRLVDGLSAVYTFYDPEDSQSSLGVYNVLWQVEQARMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMP EG >Mature_241_residues SHREAGQVAAIHFYATAPYPCSYLSGRQARSQVAIPAEAIDGGVYSQLVRLGFRRSGLYTYRPYCDSCQACIPVRLPVDQ FRPNRTQRKVWRRGAGMSARWLPLAFDAEHYALYRWYQQTRHAGGGMSDDDAQQYSEFILKSGVDSHLAEFRLDGELKMV SLVDRLVDGLSAVYTFYDPEDSQSSLGVYNVLWQVEQARMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMPE G
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
Organism=Homo sapiens, GI50345877, Length=140, Percent_Identity=32.1428571428571, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI50345875, Length=93, Percent_Identity=40.8602150537634, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI32563965, Length=149, Percent_Identity=35.5704697986577, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32563963, Length=149, Percent_Identity=35.5704697986577, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_CHRVO (Q7NX30)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901469.1 - GeneID: 2550256 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1799 - NMPDR: fig|243365.1.peg.1799 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: CVIO243365:CV_1799-MONOMER - BRENDA: 2.3.2.8 - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 27629; Mature: 27497
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHREAGQVAAIHFYATAPYPCSYLSGRQARSQVAIPAEAIDGGVYSQLVRLGFRRSGLY CCCCCCCCEEEEEEEEECCCCCHHHCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCE TYRPYCDSCQACIPVRLPVDQFRPNRTQRKVWRRGAGMSARWLPLAFDAEHYALYRWYQQ EECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH TRHAGGGMSDDDAQQYSEFILKSGVDSHLAEFRLDGELKMVSLVDRLVDGLSAVYTFYDP HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECC EDSQSSLGVYNVLWQVEQARMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC EG CC >Mature Secondary Structure SHREAGQVAAIHFYATAPYPCSYLSGRQARSQVAIPAEAIDGGVYSQLVRLGFRRSGLY CCCCCCCEEEEEEEEECCCCCHHHCCCHHHCCCCCCHHHHCCHHHHHHHHHHHHHCCCE TYRPYCDSCQACIPVRLPVDQFRPNRTQRKVWRRGAGMSARWLPLAFDAEHYALYRWYQQ EECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH TRHAGGGMSDDDAQQYSEFILKSGVDSHLAEFRLDGELKMVSLVDRLVDGLSAVYTFYDP HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECC EDSQSSLGVYNVLWQVEQARMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC EG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782