| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is aat
Identifier: 34497253
GI number: 34497253
Start: 1952771
End: 1953472
Strand: Direct
Name: aat
Synonym: CV_1798
Alternate gene names: 34497253
Gene position: 1952771-1953472 (Clockwise)
Preceding gene: 34497252
Following gene: 34497254
Centisome position: 41.1
GC content: 62.96
Gene sequence:
>702_bases ATGATTCCCTGGCTCGGTCCCGAGCCTGTCTTCCCGCCGGTGTCGCAGGCCCTGAGTCATCCCAACGGCCTGCTGGCCGC CGGCGGCGATCTGTCGTCCCGCCGCATTCTCACCGCTTACTCGGAAGGCATCTTCCCCTGGTTTTCCGACGGCGAGCCGA TACTGTGGTGGTCCCCCGCGCCGCGCATGGTGATGTTTCCCGACGAGCTCAAGGTCAGCCGCTCGCTGGCCAAGACGTTG CGCAATCTCGATTATGAAATCCGCGTCGACAGCGCCTTCCCAGAAGTGATGCGCGCTTGCGCCGAGCCCAGGGCCGGGCA GGACGGCACCTGGATCGTGCCCGAGATGGTGGCCGCCTATTGCCGGCTGCACCAGATCGGCTACGCGCACAGTTTCGAAA CCTGGATCGATGGCGAGCTGGCCGGAGGGCTGTACGGCGTGTCCATCGGCCGCATGTTCTACGGCGAGTCGATGTTTTCC CGCAGAAGGGACGCCTCCAAGCTCGCCTTCGTCCACATGGTCCGGCATCTGCAGGCGCAGGGCGTGACGATGATAGACTG CCAGATGCATACCGAGCATCTGGCCAGCCTCGGCGCGAGGCTGATATCGCGCGATGTTTTTCTTGCTACTCTGAAAGAGA ATGTCCGGCATCCCCAGCCGGATCGGATGTGGGATTACCATTACCGCCATGAGTCATCGTGA
Upstream 100 bases:
>100_bases AGGACCGCATCGCCGAACAGCACGGCTTTCGCATCGTCGAACACGCGCTGTACATGTACGGCGAGTGCCCGGATTGCCTG GGCAAGAGCGGCCGCCGCGG
Downstream 100 bases:
>100_bases AGCCGGCCAGGTCGCGGCCATCCATTTCTACGCCACGGCGCCGTACCCGTGCAGCTATCTGTCCGGGCGGCAGGCGCGCT CCCAAGTCGCGATCCCGGCC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIPWLGPEPVFPPVSQALSHPNGLLAAGGDLSSRRILTAYSEGIFPWFSDGEPILWWSPAPRMVMFPDELKVSRSLAKTL RNLDYEIRVDSAFPEVMRACAEPRAGQDGTWIVPEMVAAYCRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFS RRRDASKLAFVHMVRHLQAQGVTMIDCQMHTEHLASLGARLISRDVFLATLKENVRHPQPDRMWDYHYRHESS
Sequences:
>Translated_233_residues MIPWLGPEPVFPPVSQALSHPNGLLAAGGDLSSRRILTAYSEGIFPWFSDGEPILWWSPAPRMVMFPDELKVSRSLAKTL RNLDYEIRVDSAFPEVMRACAEPRAGQDGTWIVPEMVAAYCRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFS RRRDASKLAFVHMVRHLQAQGVTMIDCQMHTEHLASLGARLISRDVFLATLKENVRHPQPDRMWDYHYRHESS >Mature_233_residues MIPWLGPEPVFPPVSQALSHPNGLLAAGGDLSSRRILTAYSEGIFPWFSDGEPILWWSPAPRMVMFPDELKVSRSLAKTL RNLDYEIRVDSAFPEVMRACAEPRAGQDGTWIVPEMVAAYCRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFS RRRDASKLAFVHMVRHLQAQGVTMIDCQMHTEHLASLGARLISRDVFLATLKENVRHPQPDRMWDYHYRHESS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=215, Percent_Identity=47.4418604651163, Blast_Score=201, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_CHRVO (Q7NX31)
Other databases:
- EMBL: AE016825 - RefSeq: NP_901468.1 - ProteinModelPortal: Q7NX31 - SMR: Q7NX31 - GeneID: 2550380 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1798 - NMPDR: fig|243365.1.peg.1798 - HOGENOM: HBG485363 - OMA: GEPILWW - PhylomeDB: Q7NX31 - ProtClustDB: PRK00301 - BioCyc: CVIO243365:CV_1798-MONOMER - BRENDA: 2.3.2.6 - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 26448; Mature: 26448
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPWLGPEPVFPPVSQALSHPNGLLAAGGDLSSRRILTAYSEGIFPWFSDGEPILWWSPA CCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCCEECCCCEEEEECCC PRMVMFPDELKVSRSLAKTLRNLDYEIRVDSAFPEVMRACAEPRAGQDGTWIVPEMVAAY CCEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEHHHHHHHH CRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFSRRRDASKLAFVHMVRHLQAQ HHHHHHCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVTMIDCQMHTEHLASLGARLISRDVFLATLKENVRHPQPDRMWDYHYRHESS CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPWLGPEPVFPPVSQALSHPNGLLAAGGDLSSRRILTAYSEGIFPWFSDGEPILWWSPA CCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCCEECCCCEEEEECCC PRMVMFPDELKVSRSLAKTLRNLDYEIRVDSAFPEVMRACAEPRAGQDGTWIVPEMVAAY CCEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEHHHHHHHH CRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFSRRRDASKLAFVHMVRHLQAQ HHHHHHCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVTMIDCQMHTEHLASLGARLISRDVFLATLKENVRHPQPDRMWDYHYRHESS CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782