| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fur [H]
Identifier: 34497252
GI number: 34497252
Start: 1952343
End: 1952774
Strand: Direct
Name: fur [H]
Synonym: CV_1797
Alternate gene names: 34497252
Gene position: 1952343-1952774 (Clockwise)
Preceding gene: 34497246
Following gene: 34497253
Centisome position: 41.09
GC content: 61.34
Gene sequence:
>432_bases ATGAGCAAAGCCAGTCACCTCAAAGATATCGGCCTCAAAGCCACCGGACCGCGTCTGAAAATCCTCGACCTGTTCGAGCA GGGCGACGCCGGCCATATGTCCGCCGAAGACGTTTACCGCAAGCTTCTGGCGGAAAACATCGACATCGGGCTCGCCACCA TTTACCGCGTGCTGACCCAGTTCGAACAGGCCGGCATCCTGGTGCGCCACCATTTCGAGACCGGCAAGGCGGTGTACGAG CTGAACCAGGGCGGCCACCATGATCACATGGTCTGCGTCAGCTGCGGCAAGGTGGTGGAGTTCTTCGATCCGGAAATCGA GGCGCTGCAGGACCGCATCGCCGAACAGCACGGCTTTCGCATCGTCGAACACGCGCTGTACATGTACGGCGAGTGCCCGG ATTGCCTGGGCAAGAGCGGCCGCCGCGGATGA
Upstream 100 bases:
>100_bases CATGGTACTCCGATTGACTCAAACGTTTATGAGGCTGTAATTAGGCAAAGCCGTCAAAAGGCTTTATCATGATTCGAAAA CCGAGACACTTTATATCACG
Downstream 100 bases:
>100_bases TTCCCTGGCTCGGTCCCGAGCCTGTCTTCCCGCCGGTGTCGCAGGCCCTGAGTCATCCCAACGGCCTGCTGGCCGCCGGC GGCGATCTGTCGTCCCGCCG
Product: ferric uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSKASHLKDIGLKATGPRLKILDLFEQGDAGHMSAEDVYRKLLAENIDIGLATIYRVLTQFEQAGILVRHHFETGKAVYE LNQGGHHDHMVCVSCGKVVEFFDPEIEALQDRIAEQHGFRIVEHALYMYGECPDCLGKSGRRG
Sequences:
>Translated_143_residues MSKASHLKDIGLKATGPRLKILDLFEQGDAGHMSAEDVYRKLLAENIDIGLATIYRVLTQFEQAGILVRHHFETGKAVYE LNQGGHHDHMVCVSCGKVVEFFDPEIEALQDRIAEQHGFRIVEHALYMYGECPDCLGKSGRRG >Mature_142_residues SKASHLKDIGLKATGPRLKILDLFEQGDAGHMSAEDVYRKLLAENIDIGLATIYRVLTQFEQAGILVRHHFETGKAVYEL NQGGHHDHMVCVSCGKVVEFFDPEIEALQDRIAEQHGFRIVEHALYMYGECPDCLGKSGRRG
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=55.7251908396947, Blast_Score=156, Evalue=6e-40,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16010; Mature: 15878
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKASHLKDIGLKATGPRLKILDLFEQGDAGHMSAEDVYRKLLAENIDIGLATIYRVLTQ CCCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FEQAGILVRHHFETGKAVYELNQGGHHDHMVCVSCGKVVEFFDPEIEALQDRIAEQHGFR HHHCCCCEEEECCCCCEEEECCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHCHH IVEHALYMYGECPDCLGKSGRRG HHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure SKASHLKDIGLKATGPRLKILDLFEQGDAGHMSAEDVYRKLLAENIDIGLATIYRVLTQ CCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FEQAGILVRHHFETGKAVYELNQGGHHDHMVCVSCGKVVEFFDPEIEALQDRIAEQHGFR HHHCCCCEEEECCCCCEEEECCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHCHH IVEHALYMYGECPDCLGKSGRRG HHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8406856 [H]