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The map label for this gene is ycgB [H]

Identifier: 34497246

GI number: 34497246

Start: 1947107

End: 1948648

Strand: Direct

Name: ycgB [H]

Synonym: CV_1791

Alternate gene names: 34497246

Gene position: 1947107-1948648 (Clockwise)

Preceding gene: 34497245

Following gene: 34497252

Centisome position: 40.98

GC content: 60.77

Gene sequence:

>1542_bases
ATGAAACGGACGCGCAAGGGGGAAGGCTCGACGCCGATTTCCACGGGGTCGGAATGGACGTTCGATCTGGTGGGCGAATA
CGACCGCGCGATCCGCGAGATCGCGGTGGACGAATTCAAGCTGGACGTGTATCCCAACCAGCTGGAGATCATCACCGCCG
AGCAGATGATGGACGCCTACGCCTCGGTGGGCATGCCGGTCAATTACCATCACTGGAGCTACGGCAAGCATTTCGTCTCC
ACCGAGAAGAGCTACAAGCGCGGCCAGATGGGGCTGGCCTATGAGATCGTGATCAATTCCAATCCCTGCATCGCCTATCT
GATGGAAGAGAACTCGATGATGATGCAGGCGCTGGTGATCGCCCATGCCGCCTATGGCCACAACAGCTTCTTCAAGGGCA
ACTACCTGTTCCGCTCCTGGACCGACGCCTCGGCCATCATCGACTATCTGGTGTTCGCCAAGAGCTACATCATGAAGTGC
GAGGAGCGCTACGGCATCGATGAGGTGGAGGAGCTGCTGGATTCCTGCCACGCCTTGATGAATTACGGCGTGGACCGCTA
CAAGCGGCCGCAGAAGCTGTCGCTGGCCAAGGAGCAGGCGCGCCAGGAAGAGCGCGAACACTATCTGCAGATGCAGGTGA
ACGATCTGTGGCGCACGATACCCAAGCGCGACAAGGACGGCGGCGACAAGCTGCCGCCGCGTTTCCCGGCCGAGCCGCAG
GAGAACATCCTGTACTTCATCGAGAAGTCGGCGCCTTTGCTGGAGCCGTGGCAACGCGAGGTGGTGCGCATCGTCCGGAA
GGTGGCGCAGTATTTCTACCCGCAGCGGCAAACCCAGGTGATGAACGAGGGCTGGGCGACATTCTGGCACTACACCATCA
TGAATCGGCTGTACGACAAGGGCCTGATCACCGATGGCTACATGCTGGAATTCCTGCAGAGCCATACCAATGTGGTGACG
CAGCCGCCGGTCACCGCCCGCTGGTACAGCGGAATCAACCCCTACGCGCTGGGCTTCGCGATGTATCAGGACATCAAGCG
GATCTGCGAGGAGCCGACCGACGAGGACAGGGCCTGGTTCCCCGACTTGGCCGGCAGCAACTGGCGGGAGTCGCTGGAGT
TCGCGATGCGCAACTTCAAGGACGAGAGCTTCATCTCGCAATATCTGTCGCCCAAGCTGATCCGCGATTTCCGCTTCTTC
TCGATTCGCGACGACGATCGCGATGACAAGCTGGAAATCTCCAGCATCCACGACGAAGAAGGCTACCGCGACATCCGCGG
CAAGCTGGCGGAGCAATACAATCTGGGGTCGCGGGAGCCCAACATCCAGGTCTGGTCGGTCAATATGCGCGGCGACCGCA
GCCTGACACTGCGCCATACCATGCATAACCGCCGGCCGCTGGAGGAGCAGAGTGCCCAGGAAGTGCTGAAGCATGTGTGC
CGGCTGTGGGGTTTCGACGTCAGGCTGGAGAGCGTGGACAGCAACGGCGAGGTCAAGCAGGTGTACGAGGTGCAGGCGGT
GCGGGAGACGGCGACGGCCTGA

Upstream 100 bases:

>100_bases
GTCCGCAGTTCGCGATGCAGAAGATTCGTTCCGCATCCGACATTTACCCGGTGTTCCGCGAACTGTTCAAGCGCCAGCCG
GCGAACGGGAGGGTGTCGGC

Downstream 100 bases:

>100_bases
GCCAGCCAGGGCGCGAGAGGCGGGCGGCGCGGAAGCGCCGTCCGTTTTCATTTGCGCGGGGGCTTGAGCCGTTCGGGGTC
AGGCGGTGCCGGCCACCGGC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MKRTRKGEGSTPISTGSEWTFDLVGEYDRAIREIAVDEFKLDVYPNQLEIITAEQMMDAYASVGMPVNYHHWSYGKHFVS
TEKSYKRGQMGLAYEIVINSNPCIAYLMEENSMMMQALVIAHAAYGHNSFFKGNYLFRSWTDASAIIDYLVFAKSYIMKC
EERYGIDEVEELLDSCHALMNYGVDRYKRPQKLSLAKEQARQEEREHYLQMQVNDLWRTIPKRDKDGGDKLPPRFPAEPQ
ENILYFIEKSAPLLEPWQREVVRIVRKVAQYFYPQRQTQVMNEGWATFWHYTIMNRLYDKGLITDGYMLEFLQSHTNVVT
QPPVTARWYSGINPYALGFAMYQDIKRICEEPTDEDRAWFPDLAGSNWRESLEFAMRNFKDESFISQYLSPKLIRDFRFF
SIRDDDRDDKLEISSIHDEEGYRDIRGKLAEQYNLGSREPNIQVWSVNMRGDRSLTLRHTMHNRRPLEEQSAQEVLKHVC
RLWGFDVRLESVDSNGEVKQVYEVQAVRETATA

Sequences:

>Translated_513_residues
MKRTRKGEGSTPISTGSEWTFDLVGEYDRAIREIAVDEFKLDVYPNQLEIITAEQMMDAYASVGMPVNYHHWSYGKHFVS
TEKSYKRGQMGLAYEIVINSNPCIAYLMEENSMMMQALVIAHAAYGHNSFFKGNYLFRSWTDASAIIDYLVFAKSYIMKC
EERYGIDEVEELLDSCHALMNYGVDRYKRPQKLSLAKEQARQEEREHYLQMQVNDLWRTIPKRDKDGGDKLPPRFPAEPQ
ENILYFIEKSAPLLEPWQREVVRIVRKVAQYFYPQRQTQVMNEGWATFWHYTIMNRLYDKGLITDGYMLEFLQSHTNVVT
QPPVTARWYSGINPYALGFAMYQDIKRICEEPTDEDRAWFPDLAGSNWRESLEFAMRNFKDESFISQYLSPKLIRDFRFF
SIRDDDRDDKLEISSIHDEEGYRDIRGKLAEQYNLGSREPNIQVWSVNMRGDRSLTLRHTMHNRRPLEEQSAQEVLKHVC
RLWGFDVRLESVDSNGEVKQVYEVQAVRETATA
>Mature_513_residues
MKRTRKGEGSTPISTGSEWTFDLVGEYDRAIREIAVDEFKLDVYPNQLEIITAEQMMDAYASVGMPVNYHHWSYGKHFVS
TEKSYKRGQMGLAYEIVINSNPCIAYLMEENSMMMQALVIAHAAYGHNSFFKGNYLFRSWTDASAIIDYLVFAKSYIMKC
EERYGIDEVEELLDSCHALMNYGVDRYKRPQKLSLAKEQARQEEREHYLQMQVNDLWRTIPKRDKDGGDKLPPRFPAEPQ
ENILYFIEKSAPLLEPWQREVVRIVRKVAQYFYPQRQTQVMNEGWATFWHYTIMNRLYDKGLITDGYMLEFLQSHTNVVT
QPPVTARWYSGINPYALGFAMYQDIKRICEEPTDEDRAWFPDLAGSNWRESLEFAMRNFKDESFISQYLSPKLIRDFRFF
SIRDDDRDDKLEISSIHDEEGYRDIRGKLAEQYNLGSREPNIQVWSVNMRGDRSLTLRHTMHNRRPLEEQSAQEVLKHVC
RLWGFDVRLESVDSNGEVKQVYEVQAVRETATA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=493, Percent_Identity=68.9655172413793, Blast_Score=746, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60304; Mature: 60304

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTRKGEGSTPISTGSEWTFDLVGEYDRAIREIAVDEFKLDVYPNQLEIITAEQMMDAY
CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHH
ASVGMPVNYHHWSYGKHFVSTEKSYKRGQMGLAYEIVINSNPCIAYLMEENSMMMQALVI
HHCCCCCCCCCCCCCCHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHH
AHAAYGHNSFFKGNYLFRSWTDASAIIDYLVFAKSYIMKCEERYGIDEVEELLDSCHALM
HHHHCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKLSLAKEQARQEEREHYLQMQVNDLWRTIPKRDKDGGDKLPPRFPAEPQ
HCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ENILYFIEKSAPLLEPWQREVVRIVRKVAQYFYPQRQTQVMNEGWATFWHYTIMNRLYDK
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHC
GLITDGYMLEFLQSHTNVVTQPPVTARWYSGINPYALGFAMYQDIKRICEEPTDEDRAWF
CCCCCHHHHHHHHHHCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDLAGSNWRESLEFAMRNFKDESFISQYLSPKLIRDFRFFSIRDDDRDDKLEISSIHDEE
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEEEECCCCCCCCEEEECCCCCC
GYRDIRGKLAEQYNLGSREPNIQVWSVNMRGDRSLTLRHTMHNRRPLEEQSAQEVLKHVC
CHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCCHHHHHHHHHHHHH
RLWGFDVRLESVDSNGEVKQVYEVQAVRETATA
HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRTRKGEGSTPISTGSEWTFDLVGEYDRAIREIAVDEFKLDVYPNQLEIITAEQMMDAY
CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEHHHHHHHH
ASVGMPVNYHHWSYGKHFVSTEKSYKRGQMGLAYEIVINSNPCIAYLMEENSMMMQALVI
HHCCCCCCCCCCCCCCHHHHCCHHHHCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHH
AHAAYGHNSFFKGNYLFRSWTDASAIIDYLVFAKSYIMKCEERYGIDEVEELLDSCHALM
HHHHCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKLSLAKEQARQEEREHYLQMQVNDLWRTIPKRDKDGGDKLPPRFPAEPQ
HCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
ENILYFIEKSAPLLEPWQREVVRIVRKVAQYFYPQRQTQVMNEGWATFWHYTIMNRLYDK
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHC
GLITDGYMLEFLQSHTNVVTQPPVTARWYSGINPYALGFAMYQDIKRICEEPTDEDRAWF
CCCCCHHHHHHHHHHCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDLAGSNWRESLEFAMRNFKDESFISQYLSPKLIRDFRFFSIRDDDRDDKLEISSIHDEE
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEEEECCCCCCCCEEEECCCCCC
GYRDIRGKLAEQYNLGSREPNIQVWSVNMRGDRSLTLRHTMHNRRPLEEQSAQEVLKHVC
CHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCCHHHHHHHHHHHHH
RLWGFDVRLESVDSNGEVKQVYEVQAVRETATA
HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]