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The map label for this gene is gstR [H]

Identifier: 34497228

GI number: 34497228

Start: 1928621

End: 1929520

Strand: Direct

Name: gstR [H]

Synonym: CV_1773

Alternate gene names: 34497228

Gene position: 1928621-1929520 (Clockwise)

Preceding gene: 34497223

Following gene: 34497232

Centisome position: 40.59

GC content: 70.44

Gene sequence:

>900_bases
GTGGATCGTTTCCATTGGATGAGCGTTTTCGTCGCCGTGGCGGAGGAAGAGGGTTTCGCCGGGGCGGCGCGCAGGCTCAA
GCTGTCGCCGCCGGCGGTGACGCGCGCGGTGGCGGCGCTGGAGGAAAACCTGGGCGTGCGCCTGCTTAACCGGACGACCC
GTTACGTCAGGGTGACCGAGGCCGGCGCGCGCTACCTGGACGACGCGCGCCGCATCCTGGCCGCGGTGGAGGAGGCGGAG
GAGACGGCGGCCGGCATCAACGCCGAGCCGCGCGGGCTGATCCGGCTGACCGCGCCCATGTTGTTCGGCCGGCTGTACGT
GATGCCGGCGGCGCTGGATTTCCTGCGGCAATACCCGCAGGTGGAGGTGGAGGCGCTGCTGCAGGACCGCGTGGTGAATT
TGATGGAGGAAGGGCTGGACGCGGCGGTGCGCATCGGCCATCTGCCCGATTCGTCGCTGCGGGCGATCAAGGTGGGAGAG
GTGAGGCGAGTGACGTGCGCGTCGCCGGATTACCTGGCGCGCCATGGCGAGCCGGAGACGCCGGAGGCGCTGGGCGGGCA
CGCGGTGATCGCCTCCACCGCCGCGTCGTCGACGCTGGAGTGGAAGTTCGGCCCAGGGGGCGGCCATCGCCTCCGCGTCA
GGCCGCGGCTGGCGGTCAGCAGCAACGACGTCGCGATAGACGCCGCTTGCGGCGGCTTCGGCGTTACCCGGGTGATGTCC
TACCAGGTGGCGGAAGCGCTGGCGGCCGGCAAGCTCAAGCGCGTGCTCGTCCCTTACGAGAGCGAGCCCTTGCCCATCCA
CATCGTCCACGCGGAAAGCCGCCACGGCTCGACGCGGATGCGCCGCTTCATCGATTTTCTGGCCGAGCGGCTGCGCGCCG
ACCCGCGGCTTACAGGTTGA

Upstream 100 bases:

>100_bases
GGGCGGAACGTTTCCGCCATGGAGCGCACTTTGCCAAATTCTTGATTGTGGAAGAATATCTGTTTTATTTAATTGATTGT
TCCGTTTTGAGGAATAGCGA

Downstream 100 bases:

>100_bases
TTTCCAGCTTGCCCGAGCCTTCGGCCGGGTAGGCGCAGCACAGCAGAATCTCCCCGGATCGGGCGGCGTATTCCGGCGGC
TGCAGATAGGTCGCCTCGCC

Product: gstR-like transcriptional regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDRFHWMSVFVAVAEEEGFAGAARRLKLSPPAVTRAVAALEENLGVRLLNRTTRYVRVTEAGARYLDDARRILAAVEEAE
ETAAGINAEPRGLIRLTAPMLFGRLYVMPAALDFLRQYPQVEVEALLQDRVVNLMEEGLDAAVRIGHLPDSSLRAIKVGE
VRRVTCASPDYLARHGEPETPEALGGHAVIASTAASSTLEWKFGPGGGHRLRVRPRLAVSSNDVAIDAACGGFGVTRVMS
YQVAEALAAGKLKRVLVPYESEPLPIHIVHAESRHGSTRMRRFIDFLAERLRADPRLTG

Sequences:

>Translated_299_residues
MDRFHWMSVFVAVAEEEGFAGAARRLKLSPPAVTRAVAALEENLGVRLLNRTTRYVRVTEAGARYLDDARRILAAVEEAE
ETAAGINAEPRGLIRLTAPMLFGRLYVMPAALDFLRQYPQVEVEALLQDRVVNLMEEGLDAAVRIGHLPDSSLRAIKVGE
VRRVTCASPDYLARHGEPETPEALGGHAVIASTAASSTLEWKFGPGGGHRLRVRPRLAVSSNDVAIDAACGGFGVTRVMS
YQVAEALAAGKLKRVLVPYESEPLPIHIVHAESRHGSTRMRRFIDFLAERLRADPRLTG
>Mature_299_residues
MDRFHWMSVFVAVAEEEGFAGAARRLKLSPPAVTRAVAALEENLGVRLLNRTTRYVRVTEAGARYLDDARRILAAVEEAE
ETAAGINAEPRGLIRLTAPMLFGRLYVMPAALDFLRQYPQVEVEALLQDRVVNLMEEGLDAAVRIGHLPDSSLRAIKVGE
VRRVTCASPDYLARHGEPETPEALGGHAVIASTAASSTLEWKFGPGGGHRLRVRPRLAVSSNDVAIDAACGGFGVTRVMS
YQVAEALAAGKLKRVLVPYESEPLPIHIVHAESRHGSTRMRRFIDFLAERLRADPRLTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786401, Length=293, Percent_Identity=34.8122866894198, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI145693193, Length=300, Percent_Identity=33, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1789639, Length=291, Percent_Identity=29.553264604811, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1787128, Length=283, Percent_Identity=27.208480565371, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1789440, Length=285, Percent_Identity=29.1228070175439, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI87081978, Length=283, Percent_Identity=32.1554770318021, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787589, Length=282, Percent_Identity=31.9148936170213, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1788706, Length=251, Percent_Identity=28.6852589641434, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI145693105, Length=218, Percent_Identity=31.1926605504587, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787879, Length=157, Percent_Identity=37.5796178343949, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789173, Length=270, Percent_Identity=25.1851851851852, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI157672245, Length=153, Percent_Identity=28.1045751633987, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786448, Length=295, Percent_Identity=24.0677966101695, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787601, Length=136, Percent_Identity=30.1470588235294, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788481, Length=285, Percent_Identity=29.1228070175439, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32707; Mature: 32707

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRFHWMSVFVAVAEEEGFAGAARRLKLSPPAVTRAVAALEENLGVRLLNRTTRYVRVTE
CCCHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEH
AGARYLDDARRILAAVEEAEETAAGINAEPRGLIRLTAPMLFGRLYVMPAALDFLRQYPQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
VEVEALLQDRVVNLMEEGLDAAVRIGHLPDSSLRAIKVGEVRRVTCASPDYLARHGEPET
HHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCEEEECCEEEEEECCCHHHHHCCCCCC
PEALGGHAVIASTAASSTLEWKFGPGGGHRLRVRPRLAVSSNDVAIDAACGGFGVTRVMS
CHHCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHH
YQVAEALAAGKLKRVLVPYESEPLPIHIVHAESRHGSTRMRRFIDFLAERLRADPRLTG
HHHHHHHHHHCHHEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDRFHWMSVFVAVAEEEGFAGAARRLKLSPPAVTRAVAALEENLGVRLLNRTTRYVRVTE
CCCHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEH
AGARYLDDARRILAAVEEAEETAAGINAEPRGLIRLTAPMLFGRLYVMPAALDFLRQYPQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
VEVEALLQDRVVNLMEEGLDAAVRIGHLPDSSLRAIKVGEVRRVTCASPDYLARHGEPET
HHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCCEEEECCEEEEEECCCHHHHHCCCCCC
PEALGGHAVIASTAASSTLEWKFGPGGGHRLRVRPRLAVSSNDVAIDAACGGFGVTRVMS
CHHCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHH
YQVAEALAAGKLKRVLVPYESEPLPIHIVHAESRHGSTRMRRFIDFLAERLRADPRLTG
HHHHHHHHHHCHHEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]